RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 COL14A1Q05707 1796 aaKnown RBP-1.38□□□□□ -2.63
MDM2-216ENST00000471946 AKAIN1P0CW23 69 aa-1.38□□□□□ -2.63
MDM2-216ENST00000471946 GNG11P61952 73 aa-1.38□□□□□ -2.63
MDM2-216ENST00000471946 HERC2O95714 4834 aa-1.38□□□□□ -2.63
MDM2-216ENST00000471946 KIAA1551Q9HCM1 1747 aa-1.38□□□□□ -2.63
MDM2-216ENST00000471946 MYOM2P54296 1465 aa-1.38□□□□□ -2.63
MDM2-216ENST00000471946 TOPAZ1Q8N9V7 1692 aa-1.39□□□□□ -2.63
MDM2-216ENST00000471946 K7EP13 123 aa-1.39□□□□□ -2.63
MDM2-216ENST00000471946 MANBALQ9NQG1 85 aa-1.39□□□□□ -2.63
MDM2-216ENST00000471946 PLEKHH2Q8IVE3 1493 aa-1.39□□□□□ -2.63
MDM2-216ENST00000471946 MRC2Q9UBG0 1479 aa-1.39□□□□□ -2.63
MDM2-216ENST00000471946 SCAPERQ9BY12 1400 aa-1.4□□□□□ -2.63
MDM2-216ENST00000471946 FAM223BA6NKX1 122 aa-1.4□□□□□ -2.63
MDM2-216ENST00000471946 Q0VG73 95 aa-1.4□□□□□ -2.63
MDM2-216ENST00000471946 DEFB135Q30KP9 77 aa-1.4□□□□□ -2.63
MDM2-216ENST00000471946 SFTA2Q6UW10 78 aa-1.4□□□□□ -2.63
MDM2-216ENST00000471946 ABCA3Q99758 1704 aa-1.4□□□□□ -2.63
MDM2-216ENST00000471946 ATP5EP56381 51 aaPredicted RBP-1.41□□□□□ -2.64
MDM2-216ENST00000471946 PP6455Q8WZ26 134 aa-1.41□□□□□ -2.64
MDM2-216ENST00000471946 NRKQ7Z2Y5 1582 aa-1.42□□□□□ -2.64
MDM2-216ENST00000471946 A0A1B0GWA3 101 aa-1.42□□□□□ -2.64
MDM2-216ENST00000471946 UBE2D3P61077 147 aa-1.42□□□□□ -2.64
MDM2-216ENST00000471946 UBE2D2P62837 147 aa-1.42□□□□□ -2.64
MDM2-216ENST00000471946 SPHKAPQ2M3C7 1700 aa-1.43□□□□□ -2.64
MDM2-216ENST00000471946 CPSF4LA6NMK7 179 aaKnown RBP-1.43□□□□□ -2.64
MDM2-216ENST00000471946 SPRR2EP22531 72 aa-1.43□□□□□ -2.64
MDM2-216ENST00000471946 DPH3P1Q9H4G8 78 aa-1.43□□□□□ -2.64
MDM2-216ENST00000471946 TARBP1Q13395 1621 aaKnown RBP-1.44□□□□□ -2.64
MDM2-216ENST00000471946 ROCK2O75116 1388 aaKnown RBP-1.44□□□□□ -2.64
MDM2-216ENST00000471946 F6UZH7 168 aa-1.44□□□□□ -2.64
MDM2-216ENST00000471946 TRAPPC2P0DI81 140 aa-1.44□□□□□ -2.64
MDM2-216ENST00000471946 TRAPPC2BP0DI82 140 aa-1.44□□□□□ -2.64
MDM2-216ENST00000471946 SEC11AP67812 179 aa-1.44□□□□□ -2.64
MDM2-216ENST00000471946 S100A12P80511 92 aa-1.44□□□□□ -2.64
MDM2-216ENST00000471946 KNDC1Q76NI1 1749 aa-1.44□□□□□ -2.64
MDM2-216ENST00000471946 NKTRP30414 1462 aaKnown RBP-1.44□□□□□ -2.64
MDM2-216ENST00000471946 STARD9Q9P2P6 4700 aa-1.45□□□□□ -2.64
MDM2-216ENST00000471946 COX6CP09669 75 aa-1.45□□□□□ -2.64
MDM2-216ENST00000471946 C1orf54Q8WWF1 131 aa-1.45□□□□□ -2.64
MDM2-216ENST00000471946 SPTBN4Q9H254 2564 aa-1.45□□□□□ -2.64
MDM2-216ENST00000471946 CCDC141Q6ZP82 1450 aa-1.45□□□□□ -2.64
MDM2-216ENST00000471946 FAM24AA6NFZ4 105 aa-1.46□□□□□ -2.64
MDM2-216ENST00000471946 SNAPC5O75971 98 aa-1.46□□□□□ -2.64
MDM2-216ENST00000471946 PRO1854Q9UHT4 67 aa-1.46□□□□□ -2.64
MDM2-216ENST00000471946 SHPRHQ149N8 1683 aa-1.46□□□□□ -2.64
MDM2-216ENST00000471946 NBPF19A0A087WUL8 3843 aa-1.46□□□□□ -2.64
MDM2-216ENST00000471946 RGPD2P0DJD1 1756 aa-1.47□□□□□ -2.64
MDM2-216ENST00000471946 COL4A6Q14031 1691 aa-1.47□□□□□ -2.64
MDM2-216ENST00000471946 H1FX-AS1Q4G0G2 97 aa-1.47□□□□□ -2.64
MDM2-216ENST00000471946 LRRC37AA6NMS7 1700 aa-1.47□□□□□ -2.64
MDM2-216ENST00000471946 MON2Q7Z3U7 1717 aa-1.47□□□□□ -2.64
MDM2-216ENST00000471946 ARHGAP5Q13017 1502 aa-1.47□□□□□ -2.64
MDM2-216ENST00000471946 C12orf57Q99622 126 aa-1.48□□□□□ -2.65
MDM2-216ENST00000471946 USH2AO75445 5202 aa-1.48□□□□□ -2.65
MDM2-216ENST00000471946 EIF4G3O43432 1585 aaKnown RBP-1.48□□□□□ -2.65
MDM2-216ENST00000471946 NBASA2RRP1 2371 aa-1.48□□□□□ -2.65
MDM2-216ENST00000471946 PKD1P98161 4303 aa-1.49□□□□□ -2.65
MDM2-216ENST00000471946 NAP1L6A6NFF2 107 aa-1.49□□□□□ -2.65
MDM2-216ENST00000471946 A0A087WVE0 104 aa-1.5□□□□□ -2.65
MDM2-216ENST00000471946 CRIPTQ9P021 101 aa-1.5□□□□□ -2.65
MDM2-216ENST00000471946 REV3LO60673 3130 aa-1.5□□□□□ -2.65
MDM2-216ENST00000471946 DNAH6Q9C0G6 4158 aa-1.5□□□□□ -2.65
MDM2-216ENST00000471946 EDC4Q6P2E9 1401 aaKnown RBP-1.5□□□□□ -2.65
MDM2-216ENST00000471946 KIF20BQ96Q89 1820 aa-1.51□□□□□ -2.65
MDM2-216ENST00000471946 A0A1B0GU69 56 aa-1.51□□□□□ -2.65
MDM2-216ENST00000471946 HMGN1P05114 100 aa-1.51□□□□□ -2.65
MDM2-216ENST00000471946 SAA2P0DJI9 122 aaPredicted RBP-1.51□□□□□ -2.65
MDM2-216ENST00000471946 CRYM-AS1A6NIL9 109 aa-1.52□□□□□ -2.65
MDM2-216ENST00000471946 DEFB112Q30KQ8 113 aa-1.52□□□□□ -2.65
MDM2-216ENST00000471946 LINC00846Q9NV44 126 aa-1.52□□□□□ -2.65
MDM2-216ENST00000471946 C5P01031 1676 aa-1.53□□□□□ -2.65
MDM2-216ENST00000471946 BCORQ6W2J9 1755 aa-1.53□□□□□ -2.65
MDM2-216ENST00000471946 HTTP42858 3142 aa-1.54□□□□□ -2.66
MDM2-216ENST00000471946 MAPKBP1O60336 1514 aa-1.54□□□□□ -2.66
MDM2-216ENST00000471946 EPG5Q9HCE0 2579 aa-1.54□□□□□ -2.66
MDM2-216ENST00000471946 SVBPQ8N300 66 aa-1.54□□□□□ -2.66
MDM2-216ENST00000471946 SLIT1O75093 1534 aa-1.55□□□□□ -2.66
MDM2-216ENST00000471946 CUX1P39880 1505 aa-1.55□□□□□ -2.66
MDM2-216ENST00000471946 C6orf201Q7Z4U5 140 aa-1.55□□□□□ -2.66
MDM2-216ENST00000471946 ADAMTS12P58397 1594 aa-1.55□□□□□ -2.66
MDM2-216ENST00000471946 UBR4Q5T4S7 5183 aa-1.56□□□□□ -2.66
MDM2-216ENST00000471946 I3L3M4 83 aa-1.56□□□□□ -2.66
MDM2-216ENST00000471946 C9orf62Q8N4C0 152 aa-1.56□□□□□ -2.66
MDM2-216ENST00000471946 KNL1Q8NG31 2342 aa-1.57□□□□□ -2.66
MDM2-216ENST00000471946 IER3IP1Q9Y5U9 82 aa-1.57□□□□□ -2.66
MDM2-216ENST00000471946 PZPP20742 1482 aa-1.57□□□□□ -2.66
MDM2-216ENST00000471946 PTPN23Q9H3S7 1636 aa-1.58□□□□□ -2.66
MDM2-216ENST00000471946 GNG4P50150 75 aa-1.58□□□□□ -2.66
MDM2-216ENST00000471946 RPL13AP3Q6NVV1 102 aa-1.58□□□□□ -2.66
MDM2-216ENST00000471946 HIVEP1P15822 2718 aa-1.59□□□□□ -2.66
MDM2-216ENST00000471946 AKAP13Q12802 2813 aa-1.59□□□□□ -2.66
MDM2-216ENST00000471946 SNCAP37840 140 aa-1.59□□□□□ -2.66
MDM2-216ENST00000471946 PPP3R1P63098 170 aa-1.59□□□□□ -2.66
MDM2-216ENST00000471946 HSD52Q0P140 79 aa-1.59□□□□□ -2.66
MDM2-216ENST00000471946 LYSTQ99698 3801 aa-1.59□□□□□ -2.66
MDM2-216ENST00000471946 SPG11Q96JI7 2443 aa-1.6□□□□□ -2.67
MDM2-216ENST00000471946 SONP18583 2426 aaKnown RBP-1.6□□□□□ -2.67
MDM2-216ENST00000471946 AKAP9Q99996 3911 aa-1.6□□□□□ -2.67
MDM2-216ENST00000471946 FAT3Q8TDW7 4589 aa-1.61□□□□□ -2.67
MDM2-216ENST00000471946 PRRC2CQ9Y520 2896 aaKnown RBP-1.61□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms