RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 STPG4Q8N801 248 aa14.01□□□□□ -0.17
PDLIM7-206ENST00000463411 A0A096LNI7 61 aa14□□□□□ -0.17
PDLIM7-206ENST00000463411 TRAV13-1A0A0B4J241 112 aa14□□□□□ -0.17
PDLIM7-206ENST00000463411 MALP21145 153 aa14□□□□□ -0.17
PDLIM7-206ENST00000463411 ZC2HC1BQ5TFG8 222 aa14□□□□□ -0.17
PDLIM7-206ENST00000463411 SEC11AP67812 179 aa13.99□□□□□ -0.17
PDLIM7-206ENST00000463411 LINC00526Q96FQ7 95 aa13.99□□□□□ -0.17
PDLIM7-206ENST00000463411 HIST1H2BLQ99880 126 aa13.99□□□□□ -0.17
PDLIM7-206ENST00000463411 MAP1LC3CQ9BXW4 147 aa13.99□□□□□ -0.17
PDLIM7-206ENST00000463411 SYCNQ0VAF6 134 aa13.98□□□□□ -0.17
PDLIM7-206ENST00000463411 LINC00242Q5T6M2 205 aa13.98□□□□□ -0.17
PDLIM7-206ENST00000463411 TMA7Q9Y2S6 64 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-206ENST00000463411 COX7A2LO14548 114 aa13.97□□□□□ -0.17
PDLIM7-206ENST00000463411 TINCRA0A1B0GVN0 87 aa13.95□□□□□ -0.18
PDLIM7-206ENST00000463411 SYS1-DBNDD2H3BUS1 97 aa13.95□□□□□ -0.18
PDLIM7-206ENST00000463411 IGLC3P0DOY3 106 aa13.95□□□□□ -0.18
PDLIM7-206ENST00000463411 HERVK_113P63121 156 aa13.95□□□□□ -0.18
PDLIM7-206ENST00000463411 IGHV3OR16-9A0A0B4J2B5 98 aa13.94□□□□□ -0.18
PDLIM7-206ENST00000463411 ODF1Q14990 250 aa13.94□□□□□ -0.18
PDLIM7-206ENST00000463411 PLA2G2DQ9UNK4 145 aa13.94□□□□□ -0.18
PDLIM7-206ENST00000463411 CHTOPQ9Y3Y2 248 aaKnown RBP13.94□□□□□ -0.18
PDLIM7-206ENST00000463411 IGLV4-69A0A075B6H9 119 aa13.93□□□□□ -0.18
PDLIM7-206ENST00000463411 A0A0J9YXV3 536 aa13.93□□□□□ -0.18
PDLIM7-206ENST00000463411 F8VRH5 84 aa13.93□□□□□ -0.18
PDLIM7-206ENST00000463411 C3orf79P0CE67 100 aa13.93□□□□□ -0.18
PDLIM7-206ENST00000463411 PRR3P79522 188 aaKnown RBP13.93□□□□□ -0.18
PDLIM7-206ENST00000463411 PET117Q6UWS5 81 aa13.93□□□□□ -0.18
PDLIM7-206ENST00000463411 IGLV5-45A0A087WSX0 123 aa13.92□□□□□ -0.18
PDLIM7-206ENST00000463411 APOMO95445 188 aa13.92□□□□□ -0.18
PDLIM7-206ENST00000463411 LINC01561Q8N1V8 128 aa13.92□□□□□ -0.18
PDLIM7-206ENST00000463411 LOC107984640A0A0U1RRK4 108 aa13.91□□□□□ -0.18
PDLIM7-206ENST00000463411 CAMK2N2Q96S95 79 aa13.91□□□□□ -0.18
PDLIM7-206ENST00000463411 GEMIN7Q9H840 131 aaKnown RBP13.91□□□□□ -0.18
PDLIM7-206ENST00000463411 LINC01545Q5VT33 79 aa13.9□□□□□ -0.18
PDLIM7-206ENST00000463411 MRPL35Q9NZE8 188 aaKnown RBP13.9□□□□□ -0.18
PDLIM7-206ENST00000463411 A0A087WZ39 114 aa13.89□□□□□ -0.19
PDLIM7-206ENST00000463411 C5orf38Q86SI9 138 aa13.89□□□□□ -0.19
PDLIM7-206ENST00000463411 H0Y8G0 127 aa13.88□□□□□ -0.19
PDLIM7-206ENST00000463411 MT1HL1P0DM35 61 aa13.88□□□□□ -0.19
PDLIM7-206ENST00000463411 PTTG1IPP53801 180 aa13.88□□□□□ -0.19
PDLIM7-206ENST00000463411 KRTDAPP60985 99 aa13.88□□□□□ -0.19
PDLIM7-206ENST00000463411 C2orf48Q96LS8 159 aa13.88□□□□□ -0.19
PDLIM7-206ENST00000463411 C11orf86A6NJI1 115 aa13.87□□□□□ -0.19
PDLIM7-206ENST00000463411 PLNP26678 52 aa13.87□□□□□ -0.19
PDLIM7-206ENST00000463411 GAGE2BQ13066 116 aa13.87□□□□□ -0.19
PDLIM7-206ENST00000463411 SPAG11BQ08648 103 aa13.86□□□□□ -0.19
PDLIM7-206ENST00000463411 CDKN2A-AS1Q9UH64 79 aa13.86□□□□□ -0.19
PDLIM7-206ENST00000463411 DPM2O94777 84 aa13.85□□□□□ -0.19
PDLIM7-206ENST00000463411 ZNF22P17026 224 aaPredicted RBP13.85□□□□□ -0.19
PDLIM7-206ENST00000463411 AKR1D1P51857 326 aa13.85□□□□□ -0.19
PDLIM7-206ENST00000463411 LINC00469Q8N7U9 141 aa13.85□□□□□ -0.19
PDLIM7-206ENST00000463411 OR10D4PQ8NGN7 298 aa13.85□□□□□ -0.19
PDLIM7-206ENST00000463411 HMCN2Q8NDA2 5059 aa13.84□□□□□ -0.19
PDLIM7-206ENST00000463411 C20orf202A1L168 122 aa13.84□□□□□ -0.19
PDLIM7-206ENST00000463411 H3BRM9 83 aa13.84□□□□□ -0.19
PDLIM7-206ENST00000463411 IGKCP01834 107 aa13.83□□□□□ -0.2
PDLIM7-206ENST00000463411 RPL18AQ02543 176 aaKnown RBP13.83□□□□□ -0.2
PDLIM7-206ENST00000463411 Q6ZRP5 223 aa13.82□□□□□ -0.2
PDLIM7-206ENST00000463411 ORAOV1Q8WV07 137 aa13.82□□□□□ -0.2
PDLIM7-206ENST00000463411 PMCHL2Q9BQD1 86 aa13.81□□□□□ -0.2
PDLIM7-206ENST00000463411 TMEM170BQ5T4T1 132 aa13.8□□□□□ -0.2
PDLIM7-206ENST00000463411 SPINK6Q6UWN8 80 aa13.8□□□□□ -0.2
PDLIM7-206ENST00000463411 SMIM1B2RUZ4 78 aa13.79□□□□□ -0.2
PDLIM7-206ENST00000463411 F8WDY8 70 aa13.79□□□□□ -0.2
PDLIM7-206ENST00000463411 RNF151Q2KHN1 245 aa13.79□□□□□ -0.2
PDLIM7-206ENST00000463411 REG3GQ6UW15 175 aa13.79□□□□□ -0.2
PDLIM7-206ENST00000463411 LINC01600Q96MT4 127 aa13.78□□□□□ -0.2
PDLIM7-206ENST00000463411 IGLV5-39A0A0G2JS06 123 aa13.77□□□□□ -0.21
PDLIM7-206ENST00000463411 TMEM223A0PJW6 202 aa13.77□□□□□ -0.21
PDLIM7-206ENST00000463411 NDUFA1O15239 70 aa13.77□□□□□ -0.21
PDLIM7-206ENST00000463411 A0A1W2PNN7 141 aa13.76□□□□□ -0.21
PDLIM7-206ENST00000463411 C9orf116Q5BN46 136 aaPredicted RBP13.76□□□□□ -0.21
PDLIM7-206ENST00000463411 SPINK8P0C7L1 97 aa13.75□□□□□ -0.21
PDLIM7-206ENST00000463411 Q8IZM0 81 aa13.75□□□□□ -0.21
PDLIM7-206ENST00000463411 KIAA0087Q14695 138 aa13.73□□□□□ -0.21
PDLIM7-206ENST00000463411 HERVK_113P61574 105 aa13.72□□□□□ -0.21
PDLIM7-206ENST00000463411 JOSD1Q15040 202 aaPredicted RBP13.72□□□□□ -0.21
PDLIM7-206ENST00000463411 SCGB1D1O95968 90 aa13.7□□□□□ -0.22
PDLIM7-206ENST00000463411 SRSF9Q13242 221 aaKnown RBP eCLIP13.7□□□□□ -0.22
PDLIM7-206ENST00000463411 COX7B2Q8TF08 81 aa13.7□□□□□ -0.22
PDLIM7-206ENST00000463411 PRSS2P07478 247 aa13.69□□□□□ -0.22
PDLIM7-206ENST00000463411 CXCL5P42830 114 aa13.69□□□□□ -0.22
PDLIM7-206ENST00000463411 E9PLD3 99 aa13.68□□□□□ -0.22
PDLIM7-206ENST00000463411 TLX1NBP0CAT3 122 aa13.68□□□□□ -0.22
PDLIM7-206ENST00000463411 C10orf25Q5T742 122 aa13.68□□□□□ -0.22
PDLIM7-206ENST00000463411 UNQ6190/PRO20217Q6UXQ8 127 aa13.68□□□□□ -0.22
PDLIM7-206ENST00000463411 PHF5AQ7RTV0 110 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-206ENST00000463411 C6orf48Q9UBA6 75 aa13.68□□□□□ -0.22
PDLIM7-206ENST00000463411 PSORS1C2Q9UIG4 136 aa13.68□□□□□ -0.22
PDLIM7-206ENST00000463411 LEPROTO15243 131 aa13.67□□□□□ -0.22
PDLIM7-206ENST00000463411 C6orf226Q5I0X4 101 aa13.67□□□□□ -0.22
PDLIM7-206ENST00000463411 PLEKHB2Q96CS7 222 aa13.67□□□□□ -0.22
PDLIM7-206ENST00000463411 TOMM7Q9P0U1 55 aa13.67□□□□□ -0.22
PDLIM7-206ENST00000463411 SFTA2Q6UW10 78 aa13.66□□□□□ -0.22
PDLIM7-206ENST00000463411 ATOH7Q8N100 152 aa13.66□□□□□ -0.22
PDLIM7-206ENST00000463411 C1orf137Q5JT78 98 aa13.65□□□□□ -0.22
PDLIM7-206ENST00000463411 TNXBP22105 4242 aa13.65□□□□□ -0.22
PDLIM7-206ENST00000463411 TRBV30A0A0K0K1B3 111 aa13.64□□□□□ -0.23
PDLIM7-206ENST00000463411 GAGE2EQ4V326 116 aa13.64□□□□□ -0.23
PDLIM7-206ENST00000463411 PYY3Q5JQD4 70 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms