RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 RPL28P46779 137 aaKnown RBP11.75□□□□□ -0.53
ACTB-207ENST00000462494 DEFB135Q30KP9 77 aa11.75□□□□□ -0.53
ACTB-207ENST00000462494 Q9HAA7 133 aa11.75□□□□□ -0.53
ACTB-207ENST00000462494 SMIM9A6NGZ8 99 aa11.75□□□□□ -0.53
ACTB-207ENST00000462494 SMIM11BQ8TCY0 68 aa11.74□□□□□ -0.53
ACTB-207ENST00000462494 A0A1B0GUV1 79 aa11.74□□□□□ -0.53
ACTB-207ENST00000462494 FAM240AA0A1B0GVK7 77 aa11.73□□□□□ -0.53
ACTB-207ENST00000462494 TRAV26-1A0A087WT03 109 aa11.72□□□□□ -0.53
ACTB-207ENST00000462494 C9orf66Q5T8R8 295 aa11.72□□□□□ -0.53
ACTB-207ENST00000462494 OR13C6PQ8NH95 151 aa11.72□□□□□ -0.53
ACTB-207ENST00000462494 NOTCH2Q04721 2471 aa11.71□□□□□ -0.53
ACTB-207ENST00000462494 INAFM1C9JVW0 142 aa11.71□□□□□ -0.54
ACTB-207ENST00000462494 LINC00269Q8N2A0 174 aa11.71□□□□□ -0.54
ACTB-207ENST00000462494 HECTD1Q9ULT8 2610 aa11.7□□□□□ -0.54
ACTB-207ENST00000462494 LYRM9A8MSI8 78 aa11.7□□□□□ -0.54
ACTB-207ENST00000462494 A0A087WYN8 130 aa11.7□□□□□ -0.54
ACTB-207ENST00000462494 NDUFV3P56181 108 aaKnown RBP11.7□□□□□ -0.54
ACTB-207ENST00000462494 DNAL4O96015 105 aa11.69□□□□□ -0.54
ACTB-207ENST00000462494 Q8N3U1 123 aa11.69□□□□□ -0.54
ACTB-207ENST00000462494 C22orf24Q9Y442 160 aa11.69□□□□□ -0.54
ACTB-207ENST00000462494 IGLV10-54A0A075B6I4 117 aa11.68□□□□□ -0.54
ACTB-207ENST00000462494 MRPL23Q16540 153 aaKnown RBP11.68□□□□□ -0.54
ACTB-207ENST00000462494 Q8IZM0 81 aa11.68□□□□□ -0.54
ACTB-207ENST00000462494 IGHV4-28A0A0C4DH34 117 aa11.68□□□□□ -0.54
ACTB-207ENST00000462494 ATP5G1P05496 136 aa11.68□□□□□ -0.54
ACTB-207ENST00000462494 MALP21145 153 aa11.68□□□□□ -0.54
ACTB-207ENST00000462494 DAD1P61803 113 aa11.68□□□□□ -0.54
ACTB-207ENST00000462494 Q6Q795 121 aa11.68□□□□□ -0.54
ACTB-207ENST00000462494 ANGP03950 147 aaKnown RBP11.67□□□□□ -0.54
ACTB-207ENST00000462494 KMT2BQ9UMN6 2715 aaPredicted RBP11.67□□□□□ -0.54
ACTB-207ENST00000462494 ACYP1P07311 99 aa11.66□□□□□ -0.54
ACTB-207ENST00000462494 APOC4P55056 127 aa11.66□□□□□ -0.54
ACTB-207ENST00000462494 NHLRC4P0CG21 123 aaPredicted RBP11.66□□□□□ -0.54
ACTB-207ENST00000462494 TENM1Q9UKZ4 2725 aa11.66□□□□□ -0.54
ACTB-207ENST00000462494 CHCHD10Q8WYQ3 142 aaPredicted RBP11.65□□□□□ -0.54
ACTB-207ENST00000462494 CELA1Q9UNI1 258 aa11.65□□□□□ -0.54
ACTB-207ENST00000462494 H0YGX0 51 aa11.64□□□□□ -0.55
ACTB-207ENST00000462494 HTN3P15516 51 aa11.64□□□□□ -0.55
ACTB-207ENST00000462494 OTOGQ6ZRI0 2925 aa11.64□□□□□ -0.55
ACTB-207ENST00000462494 REG3AQ06141 175 aa11.64□□□□□ -0.55
ACTB-207ENST00000462494 CFAP161Q6P656 301 aa11.64□□□□□ -0.55
ACTB-207ENST00000462494 CD164L2Q6UWJ8 174 aa11.64□□□□□ -0.55
ACTB-207ENST00000462494 LECT2O14960 151 aa11.63□□□□□ -0.55
ACTB-207ENST00000462494 PRR3P79522 188 aaKnown RBP11.63□□□□□ -0.55
ACTB-207ENST00000462494 GAGE2AQ6NT46 116 aa11.63□□□□□ -0.55
ACTB-207ENST00000462494 INAFM2P0DMQ5 153 aa11.62□□□□□ -0.55
ACTB-207ENST00000462494 SMCR5Q8TEV8 140 aa11.62□□□□□ -0.55
ACTB-207ENST00000462494 LINC01561Q8N1V8 128 aa11.62□□□□□ -0.55
ACTB-207ENST00000462494 TRRAPQ9Y4A5 3859 aa11.61□□□□□ -0.55
ACTB-207ENST00000462494 SLPIP03973 132 aa11.6□□□□□ -0.55
ACTB-207ENST00000462494 KIAA0087Q14695 138 aa11.6□□□□□ -0.55
ACTB-207ENST00000462494 C9orf116Q5BN46 136 aaPredicted RBP11.6□□□□□ -0.55
ACTB-207ENST00000462494 C9orf129Q5T035 196 aaKnown RBP11.6□□□□□ -0.55
ACTB-207ENST00000462494 Q8NAQ8 132 aa11.6□□□□□ -0.55
ACTB-207ENST00000462494 NSD1Q96L73 2696 aaPredicted RBP11.59□□□□□ -0.55
ACTB-207ENST00000462494 TRBV7-7A0A0K0K1E9 115 aa11.59□□□□□ -0.55
ACTB-207ENST00000462494 MIFP14174 115 aa11.58□□□□□ -0.56
ACTB-207ENST00000462494 SPART-AS1P0CW21 52 aa11.58□□□□□ -0.56
ACTB-207ENST00000462494 C14orf132Q9NPU4 83 aa11.58□□□□□ -0.56
ACTB-207ENST00000462494 ATRQ13535 2644 aa11.57□□□□□ -0.56
ACTB-207ENST00000462494 CXCL5P42830 114 aa11.57□□□□□ -0.56
ACTB-207ENST00000462494 LINC00643Q86TS7 51 aa11.56□□□□□ -0.56
ACTB-207ENST00000462494 B5MCH6 92 aa11.56□□□□□ -0.56
ACTB-207ENST00000462494 CCDC179H3BU77 68 aa11.56□□□□□ -0.56
ACTB-207ENST00000462494 COX17Q14061 63 aa11.56□□□□□ -0.56
ACTB-207ENST00000462494 NCR3O14931 201 aa11.55□□□□□ -0.56
ACTB-207ENST00000462494 IGHV4-30-4P0DP06 118 aa11.55□□□□□ -0.56
ACTB-207ENST00000462494 C6orf223Q8N319 242 aa11.54□□□□□ -0.56
ACTB-207ENST00000462494 LINC00526Q96FQ7 95 aa11.54□□□□□ -0.56
ACTB-207ENST00000462494 NANOS2P60321 138 aaKnown RBP11.54□□□□□ -0.56
ACTB-207ENST00000462494 LELP1Q5T871 98 aa11.53□□□□□ -0.56
ACTB-207ENST00000462494 ORMDL1Q9P0S3 153 aa11.53□□□□□ -0.56
ACTB-207ENST00000462494 KLK12Q9UKR0 248 aa11.53□□□□□ -0.56
ACTB-207ENST00000462494 TEP1Q99973 2627 aaKnown RBP11.53□□□□□ -0.56
ACTB-207ENST00000462494 FAM236AA0A1B0GUQ0 79 aa11.52□□□□□ -0.57
ACTB-207ENST00000462494 FAM236BA0A1B0GV22 79 aa11.52□□□□□ -0.57
ACTB-207ENST00000462494 NDUFC2O95298 119 aa11.52□□□□□ -0.57
ACTB-207ENST00000462494 SPAG11BQ08648 103 aa11.52□□□□□ -0.57
ACTB-207ENST00000462494 TMEM126AQ9H061 195 aa11.52□□□□□ -0.57
ACTB-207ENST00000462494 C10orf25Q5T742 122 aa11.51□□□□□ -0.57
ACTB-207ENST00000462494 UNQ6190/PRO20217Q6UXQ8 127 aa11.51□□□□□ -0.57
ACTB-207ENST00000462494 SDIM1Q6ZPB5 146 aa11.51□□□□□ -0.57
ACTB-207ENST00000462494 IMUPQ9GZP8 106 aa11.51□□□□□ -0.57
ACTB-207ENST00000462494 Q8NDZ9 215 aa11.5□□□□□ -0.57
ACTB-207ENST00000462494 OBSCN-AS1Q96MR7 158 aa11.5□□□□□ -0.57
ACTB-207ENST00000462494 SS18L2Q9UHA2 77 aa11.5□□□□□ -0.57
ACTB-207ENST00000462494 KLK5Q9Y337 293 aaPredicted RBP11.5□□□□□ -0.57
ACTB-207ENST00000462494 HIVEP1P15822 2718 aa11.49□□□□□ -0.57
ACTB-207ENST00000462494 S100A7L2Q5SY68 101 aa11.48□□□□□ -0.57
ACTB-207ENST00000462494 Q8N814 137 aa11.48□□□□□ -0.57
ACTB-207ENST00000462494 CYSRT1A8MQ03 144 aa11.48□□□□□ -0.57
ACTB-207ENST00000462494 WFDC9Q8NEX5 89 aa11.47□□□□□ -0.57
ACTB-207ENST00000462494 C6orf99Q4VX62 202 aa11.47□□□□□ -0.57
ACTB-207ENST00000462494 ENHOQ6UWT2 76 aa11.46□□□□□ -0.57
ACTB-207ENST00000462494 LYPD5Q6UWN5 251 aa11.45□□□□□ -0.58
ACTB-207ENST00000462494 PRR34Q9NV39 138 aa11.45□□□□□ -0.58
ACTB-207ENST00000462494 LINC00846Q9NV44 126 aa11.45□□□□□ -0.58
ACTB-207ENST00000462494 LINC00167Q96N53 147 aa11.44□□□□□ -0.58
ACTB-207ENST00000462494 A0A1B0GX51 115 aa11.44□□□□□ -0.58
ACTB-207ENST00000462494 RETNQ9HD89 108 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms