RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 GAGE2EQ4V326 116 aa12.86□□□□□ -0.35
SRM-202ENST00000459997 PAPPA-AS1Q5QFB9 102 aa12.86□□□□□ -0.35
SRM-202ENST00000459997 FAM19A3Q7Z5A8 133 aa12.86□□□□□ -0.35
SRM-202ENST00000459997 LINC01561Q8N1V8 128 aa12.86□□□□□ -0.35
SRM-202ENST00000459997 GAGE2DQ9UEU5 116 aa12.86□□□□□ -0.35
SRM-202ENST00000459997 A0A096LNJ9 63 aa12.85□□□□□ -0.35
SRM-202ENST00000459997 TRBV30A0A0K0K1B3 111 aa12.85□□□□□ -0.35
SRM-202ENST00000459997 TNXBP22105 4242 aa12.84□□□□□ -0.35
SRM-202ENST00000459997 LINC00614P0C842 121 aa12.84□□□□□ -0.35
SRM-202ENST00000459997 C1orf137Q5JT78 98 aa12.84□□□□□ -0.35
SRM-202ENST00000459997 FAM19A5Q7Z5A7 132 aaPredicted RBP12.84□□□□□ -0.35
SRM-202ENST00000459997 PACRGQ96M98 296 aaPredicted RBP12.84□□□□□ -0.35
SRM-202ENST00000459997 PMCHL1Q16048 86 aa12.83□□□□□ -0.36
SRM-202ENST00000459997 LINC01549A6NIU2 74 aa12.82□□□□□ -0.36
SRM-202ENST00000459997 PRSS2P07478 247 aa12.82□□□□□ -0.36
SRM-202ENST00000459997 TOMM7Q9P0U1 55 aa12.82□□□□□ -0.36
SRM-202ENST00000459997 CDKN2A-AS1Q9UH64 79 aa12.82□□□□□ -0.36
SRM-202ENST00000459997 NDUFC2-KCTD14E9PQ53 114 aa12.81□□□□□ -0.36
SRM-202ENST00000459997 ODF1Q14990 250 aa12.81□□□□□ -0.36
SRM-202ENST00000459997 CST9LQ9H4G1 147 aa12.81□□□□□ -0.36
SRM-202ENST00000459997 KRTAP10-8P60410 259 aa12.8□□□□□ -0.36
SRM-202ENST00000459997 CKS1BP61024 79 aa12.8□□□□□ -0.36
SRM-202ENST00000459997 HERVK_113P63121 156 aa12.8□□□□□ -0.36
SRM-202ENST00000459997 SEC11AP67812 179 aa12.8□□□□□ -0.36
SRM-202ENST00000459997 GEMIN7Q9H840 131 aaKnown RBP12.8□□□□□ -0.36
SRM-202ENST00000459997 C6orf226Q5I0X4 101 aa12.79□□□□□ -0.36
SRM-202ENST00000459997 KRTAP11-1Q8IUC1 163 aa12.78□□□□□ -0.36
SRM-202ENST00000459997 KRTAP7-1Q8IUC3 87 aa12.78□□□□□ -0.36
SRM-202ENST00000459997 Q8IZM0 81 aa12.78□□□□□ -0.36
SRM-202ENST00000459997 UBR4Q5T4S7 5183 aa12.78□□□□□ -0.36
SRM-202ENST00000459997 M0QXV9 152 aa12.77□□□□□ -0.37
SRM-202ENST00000459997 HBDP02042 147 aa12.77□□□□□ -0.37
SRM-202ENST00000459997 RAB5BP61020 215 aa12.77□□□□□ -0.37
SRM-202ENST00000459997 PMVKQ15126 192 aa12.77□□□□□ -0.37
SRM-202ENST00000459997 TINCRA0A1B0GVN0 87 aa12.76□□□□□ -0.37
SRM-202ENST00000459997 TRGC2P03986 189 aa12.76□□□□□ -0.37
SRM-202ENST00000459997 IGLV7-43P04211 117 aa12.76□□□□□ -0.37
SRM-202ENST00000459997 PDZD11Q5EBL8 140 aa12.76□□□□□ -0.37
SRM-202ENST00000459997 C9orf129Q5T035 196 aaKnown RBP12.76□□□□□ -0.37
SRM-202ENST00000459997 LINC00469Q8N7U9 141 aa12.76□□□□□ -0.37
SRM-202ENST00000459997 NDUFA6P56556 154 aa12.74□□□□□ -0.37
SRM-202ENST00000459997 UBE2BP63146 152 aa12.74□□□□□ -0.37
SRM-202ENST00000459997 IGLV5-45A0A087WSX0 123 aa12.73□□□□□ -0.37
SRM-202ENST00000459997 COLCA2A8K830 154 aa12.73□□□□□ -0.37
SRM-202ENST00000459997 DIRC1Q969H9 104 aa12.73□□□□□ -0.37
SRM-202ENST00000459997 SMIM1B2RUZ4 78 aa12.72□□□□□ -0.37
SRM-202ENST00000459997 F8VRH5 84 aa12.71□□□□□ -0.37
SRM-202ENST00000459997 CHCHD1Q96BP2 118 aaKnown RBP12.71□□□□□ -0.37
SRM-202ENST00000459997 SCO1O75880 301 aa12.7□□□□□ -0.38
SRM-202ENST00000459997 SPINK8P0C7L1 97 aa12.7□□□□□ -0.38
SRM-202ENST00000459997 ATP5LO75964 103 aa12.69□□□□□ -0.38
SRM-202ENST00000459997 IGLC3P0DOY3 106 aa12.69□□□□□ -0.38
SRM-202ENST00000459997 XAGE1AQ9HD64 81 aa12.69□□□□□ -0.38
SRM-202ENST00000459997 H0Y9J4 135 aa12.68□□□□□ -0.38
SRM-202ENST00000459997 CXCL5P42830 114 aa12.68□□□□□ -0.38
SRM-202ENST00000459997 BAGE3Q86Y29 109 aa12.68□□□□□ -0.38
SRM-202ENST00000459997 FAM19A2Q8N3H0 131 aa12.67□□□□□ -0.38
SRM-202ENST00000459997 LINC00310P59036 64 aa12.66□□□□□ -0.38
SRM-202ENST00000459997 COX7B2Q8TF08 81 aa12.66□□□□□ -0.38
SRM-202ENST00000459997 ZNF22P17026 224 aaPredicted RBP12.65□□□□□ -0.38
SRM-202ENST00000459997 C22orf24Q9Y442 160 aa12.65□□□□□ -0.38
SRM-202ENST00000459997 HSBP1O75506 76 aa12.64□□□□□ -0.39
SRM-202ENST00000459997 PRR26Q8N8Z3 221 aa12.64□□□□□ -0.39
SRM-202ENST00000459997 IFI27L1Q96BM0 104 aa12.64□□□□□ -0.39
SRM-202ENST00000459997 C11orf86A6NJI1 115 aa12.63□□□□□ -0.39
SRM-202ENST00000459997 H3BRM9 83 aa12.63□□□□□ -0.39
SRM-202ENST00000459997 SERF1AO75920 110 aa12.63□□□□□ -0.39
SRM-202ENST00000459997 LBHQ53QV2 105 aaPredicted RBP12.62□□□□□ -0.39
SRM-202ENST00000459997 NUPR1O60356 82 aa12.61□□□□□ -0.39
SRM-202ENST00000459997 CHTOPQ9Y3Y2 248 aaKnown RBP12.61□□□□□ -0.39
SRM-202ENST00000459997 LRP2P98164 4655 aa12.59□□□□□ -0.39
SRM-202ENST00000459997 IGLV5-39A0A0G2JS06 123 aa12.59□□□□□ -0.39
SRM-202ENST00000459997 TP73-AS1Q9UF72 201 aa12.59□□□□□ -0.39
SRM-202ENST00000459997 TRAV12-1A0A0B4J245 112 aa12.58□□□□□ -0.4
SRM-202ENST00000459997 KRTAP1-4P0C5Y4 121 aa12.58□□□□□ -0.4
SRM-202ENST00000459997 TMEM170BQ5T4T1 132 aa12.58□□□□□ -0.4
SRM-202ENST00000459997 MRPL55Q7Z7F7 128 aaKnown RBP12.58□□□□□ -0.4
SRM-202ENST00000459997 IGLV1-50A0A075B6I6 118 aa12.56□□□□□ -0.4
SRM-202ENST00000459997 ZNF861PO60384 105 aa12.56□□□□□ -0.4
SRM-202ENST00000459997 H0Y8G0 127 aa12.54□□□□□ -0.4
SRM-202ENST00000459997 LEPROTL1O95214 131 aa12.54□□□□□ -0.4
SRM-202ENST00000459997 RPL37AP8A6NKH3 93 aa12.52□□□□□ -0.41
SRM-202ENST00000459997 FABP4P15090 132 aa12.52□□□□□ -0.41
SRM-202ENST00000459997 LINC00167Q96N53 147 aa12.52□□□□□ -0.41
SRM-202ENST00000459997 TMEM223A0PJW6 202 aa12.51□□□□□ -0.41
SRM-202ENST00000459997 GAGE10A6NGK3 116 aa12.51□□□□□ -0.41
SRM-202ENST00000459997 HIST1H2BKO60814 126 aa12.51□□□□□ -0.41
SRM-202ENST00000459997 HIST1H2BJP06899 126 aa12.51□□□□□ -0.41
SRM-202ENST00000459997 HIST1H2BOP23527 126 aa12.51□□□□□ -0.41
SRM-202ENST00000459997 HIST1H2BBP33778 126 aa12.51□□□□□ -0.41
SRM-202ENST00000459997 HIST1H2BDP58876 126 aa12.51□□□□□ -0.41
SRM-202ENST00000459997 HIST1H2BCP62807 126 aa12.51□□□□□ -0.41
SRM-202ENST00000459997 HIST2H2BEQ16778 126 aa12.51□□□□□ -0.41
SRM-202ENST00000459997 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.51□□□□□ -0.41
SRM-202ENST00000459997 HIST1H2BHQ93079 126 aa12.51□□□□□ -0.41
SRM-202ENST00000459997 HIST1H2BNQ99877 126 aa12.51□□□□□ -0.41
SRM-202ENST00000459997 HIST1H2BMQ99879 126 aa12.51□□□□□ -0.41
SRM-202ENST00000459997 BCE1O60756 84 aa12.5□□□□□ -0.41
SRM-202ENST00000459997 PFN2P35080 140 aa12.5□□□□□ -0.41
SRM-202ENST00000459997 RPL13AP40429 203 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms