RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-213ENST00000454132 C4orf3Q8WVX3 66 aa13.71□□□□□ -0.21
LMBR1-213ENST00000454132 H0YGX0 51 aa13.7□□□□□ -0.22
LMBR1-213ENST00000454132 SS18Q15532 418 aa13.7□□□□□ -0.22
LMBR1-213ENST00000454132 FAM19A1Q7Z5A9 133 aa13.7□□□□□ -0.22
LMBR1-213ENST00000454132 SMIM9A6NGZ8 99 aa13.69□□□□□ -0.22
LMBR1-213ENST00000454132 OXTP01178 125 aa13.69□□□□□ -0.22
LMBR1-213ENST00000454132 Q6JHZ5 121 aa13.69□□□□□ -0.22
LMBR1-213ENST00000454132 SERP2Q8N6R1 65 aa13.69□□□□□ -0.22
LMBR1-213ENST00000454132 ORMDL1Q9P0S3 153 aa13.69□□□□□ -0.22
LMBR1-213ENST00000454132 DEFB130BP0DP73 79 aa13.68□□□□□ -0.22
LMBR1-213ENST00000454132 DEFB130AP0DP74 79 aa13.68□□□□□ -0.22
LMBR1-213ENST00000454132 PIEZO1Q92508 2521 aa13.68□□□□□ -0.22
LMBR1-213ENST00000454132 ZNF462Q96JM2 2506 aa13.67□□□□□ -0.22
LMBR1-213ENST00000454132 ACANP16112 2415 aa13.67□□□□□ -0.22
LMBR1-213ENST00000454132 A0A096LNT2 108 aa13.67□□□□□ -0.22
LMBR1-213ENST00000454132 GIG44P09565 113 aaPredicted RBP13.67□□□□□ -0.22
LMBR1-213ENST00000454132 ENHOQ6UWT2 76 aa13.67□□□□□ -0.22
LMBR1-213ENST00000454132 DPH3Q96FX2 82 aa13.67□□□□□ -0.22
LMBR1-213ENST00000454132 OVOL2Q9BRP0 275 aa13.67□□□□□ -0.22
LMBR1-213ENST00000454132 TRBV6-8A0A0A6YYG3 113 aa13.66□□□□□ -0.22
LMBR1-213ENST00000454132 TRBV6-4A0A1B0GX49 114 aa13.66□□□□□ -0.22
LMBR1-213ENST00000454132 IBA57-AS1B1ANH7 110 aa13.66□□□□□ -0.22
LMBR1-213ENST00000454132 PLAC8L1A1L4L8 177 aa13.65□□□□□ -0.22
LMBR1-213ENST00000454132 C9orf116Q5BN46 136 aaPredicted RBP13.65□□□□□ -0.22
LMBR1-213ENST00000454132 OBSCN-AS1Q96MR7 158 aa13.65□□□□□ -0.22
LMBR1-213ENST00000454132 UPK3BQ9BT76 320 aa13.65□□□□□ -0.22
LMBR1-213ENST00000454132 IGHV4-31P0DP07 118 aa13.64□□□□□ -0.23
LMBR1-213ENST00000454132 A0A087WZ39 114 aa13.63□□□□□ -0.23
LMBR1-213ENST00000454132 FHL2Q14192 279 aa13.63□□□□□ -0.23
LMBR1-213ENST00000454132 IGLV10-54A0A075B6I4 117 aa13.63□□□□□ -0.23
LMBR1-213ENST00000454132 LINC00959A0A1B0GUT2 108 aa13.63□□□□□ -0.23
LMBR1-213ENST00000454132 GHRHP01286 108 aa13.63□□□□□ -0.23
LMBR1-213ENST00000454132 KRTAP10-9P60411 292 aa13.63□□□□□ -0.23
LMBR1-213ENST00000454132 C4orf26Q17RF5 130 aa13.62□□□□□ -0.23
LMBR1-213ENST00000454132 CCKP06307 115 aa13.62□□□□□ -0.23
LMBR1-213ENST00000454132 J3QLI3 93 aa13.6□□□□□ -0.23
LMBR1-213ENST00000454132 CCL24O00175 119 aa13.6□□□□□ -0.23
LMBR1-213ENST00000454132 Q8N3U1 123 aa13.6□□□□□ -0.23
LMBR1-213ENST00000454132 NANOS2P60321 138 aaKnown RBP13.6□□□□□ -0.23
LMBR1-213ENST00000454132 C5orf47Q569G3 176 aa13.59□□□□□ -0.23
LMBR1-213ENST00000454132 DSCR9P59020 149 aa13.59□□□□□ -0.23
LMBR1-213ENST00000454132 ITPR3Q14573 2671 aa13.58□□□□□ -0.23
LMBR1-213ENST00000454132 C20orf197Q8N268 126 aa13.58□□□□□ -0.24
LMBR1-213ENST00000454132 Q8N814 137 aa13.58□□□□□ -0.24
LMBR1-213ENST00000454132 TMEM86BQ8N661 226 aa13.57□□□□□ -0.24
LMBR1-213ENST00000454132 ESM1Q9NQ30 184 aa13.57□□□□□ -0.24
LMBR1-213ENST00000454132 FLNAP21333 2647 aaKnown RBP13.57□□□□□ -0.24
LMBR1-213ENST00000454132 M0R2N4 97 aa13.57□□□□□ -0.24
LMBR1-213ENST00000454132 FSHBP01225 129 aa13.57□□□□□ -0.24
LMBR1-213ENST00000454132 TMEM258P61165 79 aa13.57□□□□□ -0.24
LMBR1-213ENST00000454132 HRCT1Q6UXD1 115 aa13.57□□□□□ -0.24
LMBR1-213ENST00000454132 C16orf74Q96GX8 76 aa13.57□□□□□ -0.24
LMBR1-213ENST00000454132 Q8NDZ9 215 aa13.56□□□□□ -0.24
LMBR1-213ENST00000454132 SPATA3Q8NHX4 192 aa13.56□□□□□ -0.24
LMBR1-213ENST00000454132 C6orf99Q4VX62 202 aa13.55□□□□□ -0.24
LMBR1-213ENST00000454132 GYPEP15421 78 aa13.55□□□□□ -0.24
LMBR1-213ENST00000454132 LINC00269Q8N2A0 174 aa13.54□□□□□ -0.24
LMBR1-213ENST00000454132 PRB1P04280 392 aa13.53□□□□□ -0.24
LMBR1-213ENST00000454132 LY6G6DO95868 133 aa13.53□□□□□ -0.24
LMBR1-213ENST00000454132 RPS28P62857 69 aaKnown RBP13.52□□□□□ -0.25
LMBR1-213ENST00000454132 HAMPP81172 84 aa13.5□□□□□ -0.25
LMBR1-213ENST00000454132 LAMTOR3Q9UHA4 124 aa13.5□□□□□ -0.25
LMBR1-213ENST00000454132 DEFB4AO15263 64 aa13.49□□□□□ -0.25
LMBR1-213ENST00000454132 WFDC11Q8NEX6 87 aa13.49□□□□□ -0.25
LMBR1-213ENST00000454132 TMEM256-PLSCR3K7ERE1 68 aa13.49□□□□□ -0.25
LMBR1-213ENST00000454132 UBL5Q9BZL1 73 aa13.48□□□□□ -0.25
LMBR1-213ENST00000454132 TRAV25A0A0B4J276 109 aa13.48□□□□□ -0.25
LMBR1-213ENST00000454132 JMJD7-PLA2G4BH0Y9G9 81 aa13.48□□□□□ -0.25
LMBR1-213ENST00000454132 S100A7L2Q5SY68 101 aa13.48□□□□□ -0.25
LMBR1-213ENST00000454132 CSNK1G2-AS1Q8NCQ2 148 aa13.48□□□□□ -0.25
LMBR1-213ENST00000454132 C6orf223Q8N319 242 aa13.47□□□□□ -0.25
LMBR1-213ENST00000454132 BBC3Q96PG8 261 aaPredicted RBP13.47□□□□□ -0.25
LMBR1-213ENST00000454132 SCXQ7RTU7 201 aa13.46□□□□□ -0.25
LMBR1-213ENST00000454132 SNURFQ9Y675 71 aa13.46□□□□□ -0.25
LMBR1-213ENST00000454132 DNAJC9-AS1A6NH13 148 aa13.46□□□□□ -0.25
LMBR1-213ENST00000454132 Q8IZM0 81 aa13.46□□□□□ -0.26
LMBR1-213ENST00000454132 Q5XG85 94 aa13.45□□□□□ -0.26
LMBR1-213ENST00000454132 HIVEP2P31629 2446 aa13.43□□□□□ -0.26
LMBR1-213ENST00000454132 TRAV10A0A0B4J240 114 aa13.43□□□□□ -0.26
LMBR1-213ENST00000454132 ANGP03950 147 aaKnown RBP13.43□□□□□ -0.26
LMBR1-213ENST00000454132 C10orf25Q5T742 122 aa13.43□□□□□ -0.26
LMBR1-213ENST00000454132 C19orf73Q9NVV2 129 aa13.43□□□□□ -0.26
LMBR1-213ENST00000454132 VWFP04275 2813 aa13.43□□□□□ -0.26
LMBR1-213ENST00000454132 LINC00167Q96N53 147 aa13.43□□□□□ -0.26
LMBR1-213ENST00000454132 ZNF843Q8N446 348 aa13.42□□□□□ -0.26
LMBR1-213ENST00000454132 RBM3P98179 157 aaKnown RBP13.42□□□□□ -0.26
LMBR1-213ENST00000454132 KIAA0087Q14695 138 aa13.42□□□□□ -0.26
LMBR1-213ENST00000454132 CHCHD10Q8WYQ3 142 aaPredicted RBP13.42□□□□□ -0.26
LMBR1-213ENST00000454132 UNQ6190/PRO20217Q6UXQ8 127 aa13.41□□□□□ -0.26
LMBR1-213ENST00000454132 LINC01006Q8NI28 216 aa13.41□□□□□ -0.26
LMBR1-213ENST00000454132 LINC00575Q6W349 94 aa13.38□□□□□ -0.27
LMBR1-213ENST00000454132 Q6ZQT0 140 aa13.38□□□□□ -0.27
LMBR1-213ENST00000454132 Q6ZQY7 126 aa13.38□□□□□ -0.27
LMBR1-213ENST00000454132 RMI2Q96E14 147 aa13.38□□□□□ -0.27
LMBR1-213ENST00000454132 LINC01547P58512 204 aaPredicted RBP13.37□□□□□ -0.27
LMBR1-213ENST00000454132 FAM236DA0A1B0GTK5 79 aa13.36□□□□□ -0.27
LMBR1-213ENST00000454132 FAM236CP0DP71 79 aa13.36□□□□□ -0.27
LMBR1-213ENST00000454132 XAGE1AQ9HD64 81 aa13.36□□□□□ -0.27
LMBR1-213ENST00000454132 REG3AQ06141 175 aa13.35□□□□□ -0.27
LMBR1-213ENST00000454132 ATP5EP2Q5VTU8 51 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms