RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 PHF5AQ7RTV0 110 aaKnown RBP8.54□□□□□ -1.04
LTBR-202ENST00000440421 LINC00469Q8N7U9 141 aa8.54□□□□□ -1.04
LTBR-202ENST00000440421 URB1-AS1Q96HZ7 61 aa8.54□□□□□ -1.04
LTBR-202ENST00000440421 CST9LQ9H4G1 147 aa8.54□□□□□ -1.04
LTBR-202ENST00000440421 LINC00614P0C842 121 aa8.53□□□□□ -1.04
LTBR-202ENST00000440421 PMVKQ15126 192 aa8.53□□□□□ -1.04
LTBR-202ENST00000440421 PMCHL1Q16048 86 aa8.53□□□□□ -1.04
LTBR-202ENST00000440421 Q8IZM0 81 aa8.53□□□□□ -1.04
LTBR-202ENST00000440421 TINCRA0A1B0GVN0 87 aa8.52□□□□□ -1.05
LTBR-202ENST00000440421 NDUFA6P56556 154 aa8.52□□□□□ -1.05
LTBR-202ENST00000440421 FAM19A5Q7Z5A7 132 aaPredicted RBP8.52□□□□□ -1.05
LTBR-202ENST00000440421 YPEL4Q96NS1 127 aa8.52□□□□□ -1.05
LTBR-202ENST00000440421 LRP1Q07954 4544 aaKnown RBP8.52□□□□□ -1.05
LTBR-202ENST00000440421 A0A096LNJ9 63 aa8.51□□□□□ -1.05
LTBR-202ENST00000440421 NDUFC2-KCTD14E9PQ53 114 aa8.51□□□□□ -1.05
LTBR-202ENST00000440421 SMIM1B2RUZ4 78 aa8.5□□□□□ -1.05
LTBR-202ENST00000440421 HBDP02042 147 aa8.5□□□□□ -1.05
LTBR-202ENST00000440421 CBLN2Q8IUK8 224 aa8.5□□□□□ -1.05
LTBR-202ENST00000440421 IGLV5-45A0A087WSX0 123 aa8.49□□□□□ -1.05
LTBR-202ENST00000440421 SPINK8P0C7L1 97 aa8.49□□□□□ -1.05
LTBR-202ENST00000440421 RAB5BP61020 215 aa8.49□□□□□ -1.05
LTBR-202ENST00000440421 C9orf129Q5T035 196 aaKnown RBP8.49□□□□□ -1.05
LTBR-202ENST00000440421 SLC7A5P1Q8MH63 180 aa8.49□□□□□ -1.05
LTBR-202ENST00000440421 PSORS1C2Q9UIG4 136 aa8.49□□□□□ -1.05
LTBR-202ENST00000440421 FAT3Q8TDW7 4589 aa8.48□□□□□ -1.05
LTBR-202ENST00000440421 F8VRH5 84 aa8.48□□□□□ -1.05
LTBR-202ENST00000440421 PDZD11Q5EBL8 140 aa8.48□□□□□ -1.05
LTBR-202ENST00000440421 KRTAP7-1Q8IUC3 87 aa8.48□□□□□ -1.05
LTBR-202ENST00000440421 COX7B2Q8TF08 81 aa8.48□□□□□ -1.05
LTBR-202ENST00000440421 MT1HL1P0DM35 61 aa8.47□□□□□ -1.05
LTBR-202ENST00000440421 CXCL5P42830 114 aa8.47□□□□□ -1.05
LTBR-202ENST00000440421 C1orf137Q5JT78 98 aa8.47□□□□□ -1.05
LTBR-202ENST00000440421 SPINK6Q6UWN8 80 aa8.47□□□□□ -1.05
LTBR-202ENST00000440421 H3BRM9 83 aa8.46□□□□□ -1.06
LTBR-202ENST00000440421 M0QXV9 152 aa8.46□□□□□ -1.06
LTBR-202ENST00000440421 IGLC3P0DOY3 106 aa8.46□□□□□ -1.06
LTBR-202ENST00000440421 SRSF9Q13242 221 aaKnown RBP eCLIP8.46□□□□□ -1.06
LTBR-202ENST00000440421 KRTAP11-1Q8IUC1 163 aa8.46□□□□□ -1.06
LTBR-202ENST00000440421 XAGE1AQ9HD64 81 aa8.46□□□□□ -1.06
LTBR-202ENST00000440421 ATP5LO75964 103 aa8.45□□□□□ -1.06
LTBR-202ENST00000440421 ZNF22P17026 224 aaPredicted RBP8.44□□□□□ -1.06
LTBR-202ENST00000440421 UBE2BP63146 152 aa8.44□□□□□ -1.06
LTBR-202ENST00000440421 SERTAD4-AS1Q5TG53 156 aa8.44□□□□□ -1.06
LTBR-202ENST00000440421 BAGE3Q86Y29 109 aa8.44□□□□□ -1.06
LTBR-202ENST00000440421 REG3GQ6UW15 175 aa8.43□□□□□ -1.06
LTBR-202ENST00000440421 CHCHD1Q96BP2 118 aaKnown RBP8.43□□□□□ -1.06
LTBR-202ENST00000440421 TRGC2P03986 189 aa8.42□□□□□ -1.06
LTBR-202ENST00000440421 LINC01600Q96MT4 127 aa8.42□□□□□ -1.06
LTBR-202ENST00000440421 C11orf86A6NJI1 115 aa8.41□□□□□ -1.06
LTBR-202ENST00000440421 IGLV7-43P04211 117 aa8.41□□□□□ -1.06
LTBR-202ENST00000440421 TMEM170BQ5T4T1 132 aa8.41□□□□□ -1.06
LTBR-202ENST00000440421 IGLV5-39A0A0G2JS06 123 aa8.4□□□□□ -1.06
LTBR-202ENST00000440421 CHTOPQ9Y3Y2 248 aaKnown RBP8.4□□□□□ -1.06
LTBR-202ENST00000440421 C22orf24Q9Y442 160 aa8.4□□□□□ -1.06
LTBR-202ENST00000440421 HSBP1O75506 76 aa8.39□□□□□ -1.07
LTBR-202ENST00000440421 FAM19A2Q8N3H0 131 aa8.39□□□□□ -1.07
LTBR-202ENST00000440421 IFI27L1Q96BM0 104 aa8.39□□□□□ -1.07
LTBR-202ENST00000440421 PFN2P35080 140 aa8.38□□□□□ -1.07
LTBR-202ENST00000440421 ODF1Q14990 250 aa8.37□□□□□ -1.07
LTBR-202ENST00000440421 LBHQ53QV2 105 aaPredicted RBP8.37□□□□□ -1.07
LTBR-202ENST00000440421 PLA2G2DQ9UNK4 145 aa8.37□□□□□ -1.07
LTBR-202ENST00000440421 MRPL55Q7Z7F7 128 aaKnown RBP8.36□□□□□ -1.07
LTBR-202ENST00000440421 DIRC1Q969H9 104 aa8.36□□□□□ -1.07
LTBR-202ENST00000440421 ZNF625Q96I27 306 aaPredicted RBP8.36□□□□□ -1.07
LTBR-202ENST00000440421 TRAV12-1A0A0B4J245 112 aa8.35□□□□□ -1.07
LTBR-202ENST00000440421 COLCA2A8K830 154 aa8.35□□□□□ -1.07
LTBR-202ENST00000440421 H0Y8G0 127 aa8.35□□□□□ -1.07
LTBR-202ENST00000440421 SERF1AO75920 110 aa8.35□□□□□ -1.07
LTBR-202ENST00000440421 KRTAP10-8P60410 259 aa8.35□□□□□ -1.07
LTBR-202ENST00000440421 GAGE10A6NGK3 116 aa8.34□□□□□ -1.07
LTBR-202ENST00000440421 H0Y9J4 135 aa8.34□□□□□ -1.07
LTBR-202ENST00000440421 LINC00310P59036 64 aa8.34□□□□□ -1.07
LTBR-202ENST00000440421 TP73-AS1Q9UF72 201 aa8.34□□□□□ -1.07
LTBR-202ENST00000440421 ERG28Q9UKR5 140 aa8.34□□□□□ -1.07
LTBR-202ENST00000440421 TMEM223A0PJW6 202 aa8.33□□□□□ -1.08
LTBR-202ENST00000440421 RPL37AP8A6NKH3 93 aa8.33□□□□□ -1.08
LTBR-202ENST00000440421 NUPR1O60356 82 aa8.32□□□□□ -1.08
LTBR-202ENST00000440421 NKAPP1Q8N9T2 125 aa8.32□□□□□ -1.08
LTBR-202ENST00000440421 LINC00167Q96N53 147 aa8.32□□□□□ -1.08
LTBR-202ENST00000440421 SCO1O75880 301 aa8.31□□□□□ -1.08
LTBR-202ENST00000440421 LEPROTL1O95214 131 aa8.31□□□□□ -1.08
LTBR-202ENST00000440421 SND1-IT1Q9HBX3 110 aa8.31□□□□□ -1.08
LTBR-202ENST00000440421 IGLV5-37A0A075B6J1 123 aa8.3□□□□□ -1.08
LTBR-202ENST00000440421 FABP4P15090 132 aa8.3□□□□□ -1.08
LTBR-202ENST00000440421 COX17Q14061 63 aa8.3□□□□□ -1.08
LTBR-202ENST00000440421 SFTA2Q6UW10 78 aa8.3□□□□□ -1.08
LTBR-202ENST00000440421 PRR26Q8N8Z3 221 aa8.3□□□□□ -1.08
LTBR-202ENST00000440421 A0A0U1RRA0 63 aa8.29□□□□□ -1.08
LTBR-202ENST00000440421 ZNF861PO60384 105 aa8.29□□□□□ -1.08
LTBR-202ENST00000440421 LINC00158P58513 81 aa8.29□□□□□ -1.08
LTBR-202ENST00000440421 HMCN2Q8NDA2 5059 aa8.29□□□□□ -1.08
LTBR-202ENST00000440421 TNXBP22105 4242 aa8.28□□□□□ -1.08
LTBR-202ENST00000440421 HSPB8Q9UJY1 196 aa8.28□□□□□ -1.08
LTBR-202ENST00000440421 IGKV2-28A0A075B6P5 120 aa8.27□□□□□ -1.09
LTBR-202ENST00000440421 BCE1O60756 84 aa8.27□□□□□ -1.09
LTBR-202ENST00000440421 IGKV2D-28P01615 120 aa8.27□□□□□ -1.09
LTBR-202ENST00000440421 VPREB1P12018 145 aa8.27□□□□□ -1.09
LTBR-202ENST00000440421 KRTAP1-4P0C5Y4 121 aa8.26□□□□□ -1.09
LTBR-202ENST00000440421 RPL24P83731 157 aaKnown RBP8.26□□□□□ -1.09
LTBR-202ENST00000440421 Q8NDZ9 215 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms