RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 NDUFC2-KCTD14E9PQ53 114 aa9.25□□□□□ -0.93
FAM3A-209ENST00000421517 PDZD11Q5EBL8 140 aa9.25□□□□□ -0.93
FAM3A-209ENST00000421517 C6orf226Q5I0X4 101 aa9.25□□□□□ -0.93
FAM3A-209ENST00000421517 C10orf25Q5T742 122 aa9.25□□□□□ -0.93
FAM3A-209ENST00000421517 RPL18AQ02543 176 aaKnown RBP9.24□□□□□ -0.93
FAM3A-209ENST00000421517 Q6ZRP5 223 aa9.24□□□□□ -0.93
FAM3A-209ENST00000421517 CHCHD1Q96BP2 118 aaKnown RBP9.24□□□□□ -0.93
FAM3A-209ENST00000421517 ATP5LO75964 103 aa9.23□□□□□ -0.93
FAM3A-209ENST00000421517 CKS1BP61024 79 aa9.23□□□□□ -0.93
FAM3A-209ENST00000421517 PRR3P79522 188 aaKnown RBP9.23□□□□□ -0.93
FAM3A-209ENST00000421517 C9orf116Q5BN46 136 aaPredicted RBP9.23□□□□□ -0.93
FAM3A-209ENST00000421517 LRP1Q07954 4544 aaKnown RBP9.23□□□□□ -0.93
FAM3A-209ENST00000421517 FLG2Q5D862 2391 aaPredicted RBP9.22□□□□□ -0.93
FAM3A-209ENST00000421517 A0A1W2PNN7 141 aa9.22□□□□□ -0.93
FAM3A-209ENST00000421517 SMIM1B2RUZ4 78 aa9.22□□□□□ -0.93
FAM3A-209ENST00000421517 F8VRH5 84 aa9.22□□□□□ -0.93
FAM3A-209ENST00000421517 J3QL48 77 aa9.22□□□□□ -0.93
FAM3A-209ENST00000421517 IGLC3P0DOY3 106 aa9.22□□□□□ -0.93
FAM3A-209ENST00000421517 LINC00469Q8N7U9 141 aa9.22□□□□□ -0.93
FAM3A-209ENST00000421517 DMBT1Q9UGM3 2413 aaPredicted RBP9.22□□□□□ -0.93
FAM3A-209ENST00000421517 H3BRM9 83 aa9.21□□□□□ -0.94
FAM3A-209ENST00000421517 HNRNPA3P51991 378 aaKnown RBP9.21□□□□□ -0.94
FAM3A-209ENST00000421517 C2orf82Q6UX34 121 aa9.2□□□□□ -0.94
FAM3A-209ENST00000421517 SPINK6Q6UWN8 80 aa9.19□□□□□ -0.94
FAM3A-209ENST00000421517 TOMM7Q9P0U1 55 aa9.19□□□□□ -0.94
FAM3A-209ENST00000421517 SRSF9Q13242 221 aaKnown RBP eCLIP9.18□□□□□ -0.94
FAM3A-209ENST00000421517 CBLN2Q8IUK8 224 aa9.18□□□□□ -0.94
FAM3A-209ENST00000421517 COX7B2Q8TF08 81 aa9.18□□□□□ -0.94
FAM3A-209ENST00000421517 TRAV12-1A0A0B4J245 112 aa9.17□□□□□ -0.94
FAM3A-209ENST00000421517 IGLV5-39A0A0G2JS06 123 aa9.17□□□□□ -0.94
FAM3A-209ENST00000421517 SFTA2Q6UW10 78 aa9.17□□□□□ -0.94
FAM3A-209ENST00000421517 GAGE2EQ4V326 116 aa9.16□□□□□ -0.94
FAM3A-209ENST00000421517 GAGE2DQ9UEU5 116 aa9.16□□□□□ -0.94
FAM3A-209ENST00000421517 TRGC2P03986 189 aa9.14□□□□□ -0.95
FAM3A-209ENST00000421517 ZNF22P17026 224 aaPredicted RBP9.14□□□□□ -0.95
FAM3A-209ENST00000421517 C9orf129Q5T035 196 aaKnown RBP9.14□□□□□ -0.95
FAM3A-209ENST00000421517 BAGE3Q86Y29 109 aa9.14□□□□□ -0.95
FAM3A-209ENST00000421517 COLCA2A8K830 154 aa9.13□□□□□ -0.95
FAM3A-209ENST00000421517 HSBP1O75506 76 aa9.13□□□□□ -0.95
FAM3A-209ENST00000421517 PMCHL1Q16048 86 aa9.13□□□□□ -0.95
FAM3A-209ENST00000421517 PHF5AQ7RTV0 110 aaKnown RBP9.13□□□□□ -0.95
FAM3A-209ENST00000421517 TP73-AS1Q9UF72 201 aa9.13□□□□□ -0.95
FAM3A-209ENST00000421517 PSORS1C2Q9UIG4 136 aa9.13□□□□□ -0.95
FAM3A-209ENST00000421517 PLA2G2DQ9UNK4 145 aa9.13□□□□□ -0.95
FAM3A-209ENST00000421517 SPINK8P0C7L1 97 aa9.12□□□□□ -0.95
FAM3A-209ENST00000421517 NDUFA6P56556 154 aa9.12□□□□□ -0.95
FAM3A-209ENST00000421517 COX17Q14061 63 aa9.12□□□□□ -0.95
FAM3A-209ENST00000421517 SERTAD4-AS1Q5TG53 156 aa9.12□□□□□ -0.95
FAM3A-209ENST00000421517 KRTAP7-1Q8IUC3 87 aa9.12□□□□□ -0.95
FAM3A-209ENST00000421517 IFI27L1Q96BM0 104 aa9.12□□□□□ -0.95
FAM3A-209ENST00000421517 FAM168BA1KXE4 195 aa9.11□□□□□ -0.95
FAM3A-209ENST00000421517 REG3GQ6UW15 175 aa9.11□□□□□ -0.95
FAM3A-209ENST00000421517 LINC01600Q96MT4 127 aa9.11□□□□□ -0.95
FAM3A-209ENST00000421517 CHTOPQ9Y3Y2 248 aaKnown RBP9.11□□□□□ -0.95
FAM3A-209ENST00000421517 M0QXV9 152 aa9.1□□□□□ -0.95
FAM3A-209ENST00000421517 LBHQ53QV2 105 aaPredicted RBP9.1□□□□□ -0.95
FAM3A-209ENST00000421517 C11orf86A6NJI1 115 aa9.09□□□□□ -0.95
FAM3A-209ENST00000421517 MT1HL1P0DM35 61 aa9.09□□□□□ -0.95
FAM3A-209ENST00000421517 FAM19A5Q7Z5A7 132 aaPredicted RBP9.09□□□□□ -0.95
FAM3A-209ENST00000421517 C1orf137Q5JT78 98 aa9.08□□□□□ -0.96
FAM3A-209ENST00000421517 IGLV5-37A0A075B6J1 123 aa9.07□□□□□ -0.96
FAM3A-209ENST00000421517 NUPR1O60356 82 aa9.07□□□□□ -0.96
FAM3A-209ENST00000421517 LEPROTL1O95214 131 aa9.07□□□□□ -0.96
FAM3A-209ENST00000421517 IGLV7-43P04211 117 aa9.07□□□□□ -0.96
FAM3A-209ENST00000421517 TMEM170BQ5T4T1 132 aa9.07□□□□□ -0.96
FAM3A-209ENST00000421517 C22orf24Q9Y442 160 aa9.07□□□□□ -0.96
FAM3A-209ENST00000421517 TMEM223A0PJW6 202 aa9.06□□□□□ -0.96
FAM3A-209ENST00000421517 XAGE1AQ9HD64 81 aa9.06□□□□□ -0.96
FAM3A-209ENST00000421517 SERF1AO75920 110 aa9.05□□□□□ -0.96
FAM3A-209ENST00000421517 LINC00310P59036 64 aa9.05□□□□□ -0.96
FAM3A-209ENST00000421517 UBE2BP63146 152 aa9.05□□□□□ -0.96
FAM3A-209ENST00000421517 FAM19A2Q8N3H0 131 aa9.05□□□□□ -0.96
FAM3A-209ENST00000421517 ZNF625Q96I27 306 aaPredicted RBP9.05□□□□□ -0.96
FAM3A-209ENST00000421517 HSPB8Q9UJY1 196 aa9.05□□□□□ -0.96
FAM3A-209ENST00000421517 TNXBP22105 4242 aa9.04□□□□□ -0.96
FAM3A-209ENST00000421517 MRPL55Q7Z7F7 128 aaKnown RBP9.04□□□□□ -0.96
FAM3A-209ENST00000421517 DIRC1Q969H9 104 aa9.04□□□□□ -0.96
FAM3A-209ENST00000421517 ERG28Q9UKR5 140 aa9.04□□□□□ -0.96
FAM3A-209ENST00000421517 KRTAP11-1Q8IUC1 163 aa9.03□□□□□ -0.96
FAM3A-209ENST00000421517 LINC00587B1AMM8 73 aa9.02□□□□□ -0.97
FAM3A-209ENST00000421517 PLNP26678 52 aa9.02□□□□□ -0.97
FAM3A-209ENST00000421517 KRTAP10-8P60410 259 aa9.02□□□□□ -0.97
FAM3A-209ENST00000421517 HERV-K104P63124 156 aa9.01□□□□□ -0.97
FAM3A-209ENST00000421517 HMCN2Q8NDA2 5059 aa9.01□□□□□ -0.97
FAM3A-209ENST00000421517 H0Y9J4 135 aa9□□□□□ -0.97
FAM3A-209ENST00000421517 RPL24P83731 157 aaKnown RBP9□□□□□ -0.97
FAM3A-209ENST00000421517 ZNF861PO60384 105 aa8.99□□□□□ -0.97
FAM3A-209ENST00000421517 SCO1O75880 301 aa8.99□□□□□ -0.97
FAM3A-209ENST00000421517 PFN2P35080 140 aa8.99□□□□□ -0.97
FAM3A-209ENST00000421517 HIST1H2BKO60814 126 aa8.98□□□□□ -0.97
FAM3A-209ENST00000421517 HIST1H2BJP06899 126 aa8.98□□□□□ -0.97
FAM3A-209ENST00000421517 HIST1H2BOP23527 126 aa8.98□□□□□ -0.97
FAM3A-209ENST00000421517 HIST1H2BBP33778 126 aa8.98□□□□□ -0.97
FAM3A-209ENST00000421517 HIST1H2BDP58876 126 aa8.98□□□□□ -0.97
FAM3A-209ENST00000421517 HIST1H2BCP62807 126 aa8.98□□□□□ -0.97
FAM3A-209ENST00000421517 HIST2H2BEQ16778 126 aa8.98□□□□□ -0.97
FAM3A-209ENST00000421517 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.98□□□□□ -0.97
FAM3A-209ENST00000421517 NKAPP1Q8N9T2 125 aa8.98□□□□□ -0.97
FAM3A-209ENST00000421517 HIST1H2BHQ93079 126 aa8.98□□□□□ -0.97
FAM3A-209ENST00000421517 LINC00167Q96N53 147 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms