RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 FAM19A2Q8N3H0 131 aa7.03□□□□□ -1.28
TM9SF4-203ENST00000417389 F8WDY8 70 aa7.02□□□□□ -1.29
TM9SF4-203ENST00000417389 PMVKQ15126 192 aa7.02□□□□□ -1.29
TM9SF4-203ENST00000417389 C6orf226Q5I0X4 101 aa7.02□□□□□ -1.29
TM9SF4-203ENST00000417389 UNQ6190/PRO20217Q6UXQ8 127 aa7.02□□□□□ -1.29
TM9SF4-203ENST00000417389 CST9LQ9H4G1 147 aa7.02□□□□□ -1.29
TM9SF4-203ENST00000417389 CDKN2A-AS1Q9UH64 79 aa7.02□□□□□ -1.29
TM9SF4-203ENST00000417389 NUPR1O60356 82 aa7.01□□□□□ -1.29
TM9SF4-203ENST00000417389 LEPROTL1O95214 131 aa7.01□□□□□ -1.29
TM9SF4-203ENST00000417389 PTTG1IPP53801 180 aa7.01□□□□□ -1.29
TM9SF4-203ENST00000417389 COA6Q5JTJ3 125 aaKnown RBP7.01□□□□□ -1.29
TM9SF4-203ENST00000417389 C10orf25Q5T742 122 aa7.01□□□□□ -1.29
TM9SF4-203ENST00000417389 C2orf82Q6UX34 121 aa7.01□□□□□ -1.29
TM9SF4-203ENST00000417389 LINC01561Q8N1V8 128 aa7.01□□□□□ -1.29
TM9SF4-203ENST00000417389 MRPL35Q9NZE8 188 aaKnown RBP7.01□□□□□ -1.29
TM9SF4-203ENST00000417389 PLAC8Q9NZF1 115 aa7.01□□□□□ -1.29
TM9SF4-203ENST00000417389 HSPB8Q9UJY1 196 aa7.01□□□□□ -1.29
TM9SF4-203ENST00000417389 TINCRA0A1B0GVN0 87 aa7□□□□□ -1.29
TM9SF4-203ENST00000417389 RNF151Q2KHN1 245 aa7□□□□□ -1.29
TM9SF4-203ENST00000417389 GAGE2EQ4V326 116 aa7□□□□□ -1.29
TM9SF4-203ENST00000417389 IFI27L1Q96BM0 104 aa7□□□□□ -1.29
TM9SF4-203ENST00000417389 GAGE2DQ9UEU5 116 aa7□□□□□ -1.29
TM9SF4-203ENST00000417389 H3BRM9 83 aa6.99□□□□□ -1.29
TM9SF4-203ENST00000417389 FAM19A3Q7Z5A8 133 aa6.99□□□□□ -1.29
TM9SF4-203ENST00000417389 C6orf48Q9UBA6 75 aa6.99□□□□□ -1.29
TM9SF4-203ENST00000417389 FLG2Q5D862 2391 aaPredicted RBP6.99□□□□□ -1.29
TM9SF4-203ENST00000417389 VPS13BQ7Z7G8 4022 aa6.98□□□□□ -1.29
TM9SF4-203ENST00000417389 TRBV30A0A0K0K1B3 111 aa6.98□□□□□ -1.29
TM9SF4-203ENST00000417389 SPINK8P0C7L1 97 aa6.98□□□□□ -1.29
TM9SF4-203ENST00000417389 FABP4P15090 132 aa6.98□□□□□ -1.29
TM9SF4-203ENST00000417389 KIAA0087Q14695 138 aa6.98□□□□□ -1.29
TM9SF4-203ENST00000417389 Q8IZM0 81 aa6.98□□□□□ -1.29
TM9SF4-203ENST00000417389 J3QL48 77 aa6.97□□□□□ -1.29
TM9SF4-203ENST00000417389 S100A6P06703 90 aa6.97□□□□□ -1.29
TM9SF4-203ENST00000417389 C9orf116Q5BN46 136 aaPredicted RBP6.97□□□□□ -1.29
TM9SF4-203ENST00000417389 TRAV12-1A0A0B4J245 112 aa6.96□□□□□ -1.3
TM9SF4-203ENST00000417389 H0Y8G0 127 aa6.96□□□□□ -1.3
TM9SF4-203ENST00000417389 IGLC3P0DOY3 106 aa6.96□□□□□ -1.3
TM9SF4-203ENST00000417389 Q6ZRP5 223 aa6.96□□□□□ -1.3
TM9SF4-203ENST00000417389 COX7B2Q8TF08 81 aa6.96□□□□□ -1.3
TM9SF4-203ENST00000417389 MAP1LC3CQ9BXW4 147 aa6.96□□□□□ -1.3
TM9SF4-203ENST00000417389 CHTOPQ9Y3Y2 248 aaKnown RBP6.96□□□□□ -1.3
TM9SF4-203ENST00000417389 A0A1W2PNN7 141 aa6.95□□□□□ -1.3
TM9SF4-203ENST00000417389 SMIM1B2RUZ4 78 aa6.95□□□□□ -1.3
TM9SF4-203ENST00000417389 NDUFC2-KCTD14E9PQ53 114 aa6.95□□□□□ -1.3
TM9SF4-203ENST00000417389 F8VRH5 84 aa6.95□□□□□ -1.3
TM9SF4-203ENST00000417389 CXCL5P42830 114 aa6.95□□□□□ -1.3
TM9SF4-203ENST00000417389 FAM19A5Q7Z5A7 132 aaPredicted RBP6.95□□□□□ -1.3
TM9SF4-203ENST00000417389 DMBT1Q9UGM3 2413 aaPredicted RBP6.95□□□□□ -1.3
TM9SF4-203ENST00000417389 IGLV5-45A0A087WSX0 123 aa6.94□□□□□ -1.3
TM9SF4-203ENST00000417389 TLX1NBP0CAT3 122 aa6.94□□□□□ -1.3
TM9SF4-203ENST00000417389 S100A2P29034 98 aa6.94□□□□□ -1.3
TM9SF4-203ENST00000417389 TMEM170BQ5T4T1 132 aa6.94□□□□□ -1.3
TM9SF4-203ENST00000417389 C11orf86A6NJI1 115 aa6.93□□□□□ -1.3
TM9SF4-203ENST00000417389 KRTAP10-4P60372 401 aaPredicted RBP6.93□□□□□ -1.3
TM9SF4-203ENST00000417389 ODF1Q14990 250 aa6.93□□□□□ -1.3
TM9SF4-203ENST00000417389 FAM168BA1KXE4 195 aa6.92□□□□□ -1.3
TM9SF4-203ENST00000417389 ZNF22P17026 224 aaPredicted RBP6.92□□□□□ -1.3
TM9SF4-203ENST00000417389 PRR3P79522 188 aaKnown RBP6.92□□□□□ -1.3
TM9SF4-203ENST00000417389 PHF5AQ7RTV0 110 aaKnown RBP6.92□□□□□ -1.3
TM9SF4-203ENST00000417389 HIST3H2BBQ8N257 126 aa6.92□□□□□ -1.3
TM9SF4-203ENST00000417389 MYCBP2O75592 4640 aa6.92□□□□□ -1.3
TM9SF4-203ENST00000417389 SYS1-DBNDD2H3BUS1 97 aa6.91□□□□□ -1.3
TM9SF4-203ENST00000417389 PLNP26678 52 aa6.91□□□□□ -1.3
TM9SF4-203ENST00000417389 HNRNPA3P51991 378 aaKnown RBP6.91□□□□□ -1.3
TM9SF4-203ENST00000417389 UBE2BP63146 152 aa6.91□□□□□ -1.3
TM9SF4-203ENST00000417389 XAGE1AQ9HD64 81 aa6.91□□□□□ -1.3
TM9SF4-203ENST00000417389 M0QXV9 152 aa6.9□□□□□ -1.3
TM9SF4-203ENST00000417389 DPM2O94777 84 aa6.9□□□□□ -1.3
TM9SF4-203ENST00000417389 KRTDAPP60985 99 aa6.9□□□□□ -1.3
TM9SF4-203ENST00000417389 SNRPEP62304 92 aaKnown RBP6.9□□□□□ -1.3
TM9SF4-203ENST00000417389 PET117Q6UWS5 81 aa6.9□□□□□ -1.3
TM9SF4-203ENST00000417389 HIST1H2BLQ99880 126 aa6.9□□□□□ -1.3
TM9SF4-203ENST00000417389 C20orf202A1L168 122 aa6.89□□□□□ -1.31
TM9SF4-203ENST00000417389 C3orf79P0CE67 100 aa6.89□□□□□ -1.31
TM9SF4-203ENST00000417389 C9orf129Q5T035 196 aaKnown RBP6.89□□□□□ -1.31
TM9SF4-203ENST00000417389 PMCHL2Q9BQD1 86 aa6.89□□□□□ -1.31
TM9SF4-203ENST00000417389 C5orf52A6NGY3 159 aa6.88□□□□□ -1.31
TM9SF4-203ENST00000417389 IGKCP01834 107 aa6.88□□□□□ -1.31
TM9SF4-203ENST00000417389 PFN2P35080 140 aa6.88□□□□□ -1.31
TM9SF4-203ENST00000417389 C1orf137Q5JT78 98 aa6.88□□□□□ -1.31
TM9SF4-203ENST00000417389 ZNF625Q96I27 306 aaPredicted RBP6.88□□□□□ -1.31
TM9SF4-203ENST00000417389 TMA7Q9Y2S6 64 aaKnown RBP6.88□□□□□ -1.31
TM9SF4-203ENST00000417389 IGLV5-39A0A0G2JS06 123 aa6.87□□□□□ -1.31
TM9SF4-203ENST00000417389 KRTAP29-1A8MX34 341 aaPredicted RBP6.87□□□□□ -1.31
TM9SF4-203ENST00000417389 HERVK_113P61574 105 aa6.87□□□□□ -1.31
TM9SF4-203ENST00000417389 LINC01545Q5VT33 79 aa6.87□□□□□ -1.31
TM9SF4-203ENST00000417389 PSORS1C2Q9UIG4 136 aa6.87□□□□□ -1.31
TM9SF4-203ENST00000417389 TMEM223A0PJW6 202 aa6.86□□□□□ -1.31
TM9SF4-203ENST00000417389 OXTP01178 125 aa6.86□□□□□ -1.31
TM9SF4-203ENST00000417389 LBHQ53QV2 105 aaPredicted RBP6.85□□□□□ -1.31
TM9SF4-203ENST00000417389 SERTAD4-AS1Q5TG53 156 aa6.85□□□□□ -1.31
TM9SF4-203ENST00000417389 SFTA2Q6UW10 78 aa6.85□□□□□ -1.31
TM9SF4-203ENST00000417389 AKR1D1P51857 326 aa6.84□□□□□ -1.31
TM9SF4-203ENST00000417389 NKAPP1Q8N9T2 125 aa6.84□□□□□ -1.31
TM9SF4-203ENST00000417389 ERG28Q9UKR5 140 aa6.84□□□□□ -1.31
TM9SF4-203ENST00000417389 C22orf24Q9Y442 160 aa6.84□□□□□ -1.31
TM9SF4-203ENST00000417389 A0A0U1RRA0 63 aa6.83□□□□□ -1.32
TM9SF4-203ENST00000417389 LINC00158P58513 81 aa6.83□□□□□ -1.32
TM9SF4-203ENST00000417389 REG3GQ6UW15 175 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms