RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 MIAQ16674 131 aa11.73□□□□□ -0.53
PTPRC-206ENST00000413409 ICOSQ9Y6W8 199 aa11.73□□□□□ -0.53
PTPRC-206ENST00000413409 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.72□□□□□ -0.53
PTPRC-206ENST00000413409 A0A0B4J2C4 111 aa11.72□□□□□ -0.53
PTPRC-206ENST00000413409 RBX1P62877 108 aa11.72□□□□□ -0.53
PTPRC-206ENST00000413409 MRPL23Q16540 153 aaKnown RBP11.72□□□□□ -0.53
PTPRC-206ENST00000413409 UBR4Q5T4S7 5183 aa11.72□□□□□ -0.53
PTPRC-206ENST00000413409 IFITM1P13164 125 aa11.71□□□□□ -0.53
PTPRC-206ENST00000413409 HERV-K104P63124 156 aa11.71□□□□□ -0.53
PTPRC-206ENST00000413409 ZNF625Q96I27 306 aaPredicted RBP11.71□□□□□ -0.53
PTPRC-206ENST00000413409 PGPEP1Q9NXJ5 209 aa11.71□□□□□ -0.53
PTPRC-206ENST00000413409 IGHV3OR16-9A0A0B4J2B5 98 aa11.7□□□□□ -0.54
PTPRC-206ENST00000413409 CFC1BP0CG36 223 aa11.7□□□□□ -0.54
PTPRC-206ENST00000413409 CFC1P0CG37 223 aa11.7□□□□□ -0.54
PTPRC-206ENST00000413409 NANOS2P60321 138 aaKnown RBP11.7□□□□□ -0.54
PTPRC-206ENST00000413409 MUSTN1Q8IVN3 82 aa11.7□□□□□ -0.54
PTPRC-206ENST00000413409 APLNQ9ULZ1 77 aa11.7□□□□□ -0.54
PTPRC-206ENST00000413409 DMBT1Q9UGM3 2413 aaPredicted RBP11.69□□□□□ -0.54
PTPRC-206ENST00000413409 LINC00959A0A1B0GUT2 108 aa11.69□□□□□ -0.54
PTPRC-206ENST00000413409 A4D1N5 150 aa11.69□□□□□ -0.54
PTPRC-206ENST00000413409 APOMO95445 188 aa11.69□□□□□ -0.54
PTPRC-206ENST00000413409 TSPAN13O95857 204 aa11.69□□□□□ -0.54
PTPRC-206ENST00000413409 CIRBPQ14011 172 aaKnown RBP11.69□□□□□ -0.54
PTPRC-206ENST00000413409 LYRM7Q5U5X0 104 aa11.69□□□□□ -0.54
PTPRC-206ENST00000413409 LINC01561Q8N1V8 128 aa11.69□□□□□ -0.54
PTPRC-206ENST00000413409 Q9H8V8 135 aa11.69□□□□□ -0.54
PTPRC-206ENST00000413409 A0A087WZ39 114 aa11.68□□□□□ -0.54
PTPRC-206ENST00000413409 A0A096LPF7 62 aa11.68□□□□□ -0.54
PTPRC-206ENST00000413409 TMEM262E9PQX1 116 aa11.68□□□□□ -0.54
PTPRC-206ENST00000413409 H3BNG1 76 aa11.68□□□□□ -0.54
PTPRC-206ENST00000413409 LELP1Q5T871 98 aa11.68□□□□□ -0.54
PTPRC-206ENST00000413409 PPDPFQ9H3Y8 114 aa11.68□□□□□ -0.54
PTPRC-206ENST00000413409 SS18Q15532 418 aa11.67□□□□□ -0.54
PTPRC-206ENST00000413409 ADAMTSL4-AS1Q5T5F5 129 aa11.67□□□□□ -0.54
PTPRC-206ENST00000413409 COPS9Q8WXC6 57 aa11.67□□□□□ -0.54
PTPRC-206ENST00000413409 PRO1854Q9UHT4 67 aa11.67□□□□□ -0.54
PTPRC-206ENST00000413409 DNAH5Q8TE73 4624 aa11.66□□□□□ -0.54
PTPRC-206ENST00000413409 HTN3P15516 51 aa11.66□□□□□ -0.54
PTPRC-206ENST00000413409 SFTA2Q6UW10 78 aa11.66□□□□□ -0.54
PTPRC-206ENST00000413409 COX7B2Q8TF08 81 aa11.66□□□□□ -0.54
PTPRC-206ENST00000413409 IGKV3OR2-268A0A0C4DH90 116 aa11.65□□□□□ -0.54
PTPRC-206ENST00000413409 EIF4EBP3O60516 100 aaPredicted RBP11.63□□□□□ -0.55
PTPRC-206ENST00000413409 C11orf45Q8TAV5 145 aa11.63□□□□□ -0.55
PTPRC-206ENST00000413409 IGHV3-33P01772 117 aa11.62□□□□□ -0.55
PTPRC-206ENST00000413409 PRSS2P07478 247 aa11.62□□□□□ -0.55
PTPRC-206ENST00000413409 M0R2N4 97 aa11.61□□□□□ -0.55
PTPRC-206ENST00000413409 MEIG1Q5JSS6 88 aa11.61□□□□□ -0.55
PTPRC-206ENST00000413409 CDK2AP2O75956 126 aa11.6□□□□□ -0.55
PTPRC-206ENST00000413409 Q8N1X5 172 aa11.6□□□□□ -0.55
PTPRC-206ENST00000413409 ERG28Q9UKR5 140 aa11.6□□□□□ -0.55
PTPRC-206ENST00000413409 CD164L2Q6UWJ8 174 aa11.6□□□□□ -0.55
PTPRC-206ENST00000413409 LINC00308Q8TCZ7 52 aa11.6□□□□□ -0.55
PTPRC-206ENST00000413409 ANGP03950 147 aaKnown RBP11.59□□□□□ -0.55
PTPRC-206ENST00000413409 XCL1P47992 114 aa11.59□□□□□ -0.55
PTPRC-206ENST00000413409 REG3AQ06141 175 aa11.59□□□□□ -0.55
PTPRC-206ENST00000413409 Q6ZTC4 211 aa11.59□□□□□ -0.55
PTPRC-206ENST00000413409 C5orf38Q86SI9 138 aa11.59□□□□□ -0.55
PTPRC-206ENST00000413409 Q8IZM0 81 aa11.59□□□□□ -0.55
PTPRC-206ENST00000413409 LINC00269Q8N2A0 174 aa11.59□□□□□ -0.55
PTPRC-206ENST00000413409 TRBV20-1A0A075B6N2 111 aa11.58□□□□□ -0.56
PTPRC-206ENST00000413409 CLPSL2Q6UWE3 100 aa11.58□□□□□ -0.56
PTPRC-206ENST00000413409 TOMM7Q9P0U1 55 aa11.58□□□□□ -0.56
PTPRC-206ENST00000413409 LOC107984156A0A0G2JMH3 177 aa11.57□□□□□ -0.56
PTPRC-206ENST00000413409 IBA57-AS1B1ANH7 110 aa11.57□□□□□ -0.56
PTPRC-206ENST00000413409 LYPD5Q6UWN5 251 aa11.57□□□□□ -0.56
PTPRC-206ENST00000413409 ARL17AQ8IVW1 177 aa11.57□□□□□ -0.56
PTPRC-206ENST00000413409 CHCHD10Q8WYQ3 142 aaPredicted RBP11.57□□□□□ -0.56
PTPRC-206ENST00000413409 F8W1H4 67 aa11.56□□□□□ -0.56
PTPRC-206ENST00000413409 COX7A2LO14548 114 aa11.56□□□□□ -0.56
PTPRC-206ENST00000413409 DAND5Q8N907 189 aa11.56□□□□□ -0.56
PTPRC-206ENST00000413409 PRR34Q9NV39 138 aa11.56□□□□□ -0.56
PTPRC-206ENST00000413409 H3BMG7 143 aa11.55□□□□□ -0.56
PTPRC-206ENST00000413409 CXCL5P42830 114 aa11.55□□□□□ -0.56
PTPRC-206ENST00000413409 NPC2P61916 151 aa11.55□□□□□ -0.56
PTPRC-206ENST00000413409 TRBV30A0A0K0K1B3 111 aa11.54□□□□□ -0.56
PTPRC-206ENST00000413409 Q1RN00 199 aa11.54□□□□□ -0.56
PTPRC-206ENST00000413409 SOSTDC1Q6X4U4 206 aa11.54□□□□□ -0.56
PTPRC-206ENST00000413409 Q8N3U1 123 aa11.54□□□□□ -0.56
PTPRC-206ENST00000413409 PRO0461Q9UI25 63 aa11.54□□□□□ -0.56
PTPRC-206ENST00000413409 MYCBP2O75592 4640 aa11.53□□□□□ -0.56
PTPRC-206ENST00000413409 SRRM2Q9UQ35 2752 aaKnown RBP11.52□□□□□ -0.57
PTPRC-206ENST00000413409 PSMB2P49721 201 aa11.52□□□□□ -0.57
PTPRC-206ENST00000413409 FOXI1Q12951 378 aa11.52□□□□□ -0.57
PTPRC-206ENST00000413409 OCIAD2Q56VL3 154 aa11.52□□□□□ -0.57
PTPRC-206ENST00000413409 DEFB131BA0A096LNP1 70 aa11.51□□□□□ -0.57
PTPRC-206ENST00000413409 RPL13AP40429 203 aaKnown RBP11.51□□□□□ -0.57
PTPRC-206ENST00000413409 C6orf226Q5I0X4 101 aa11.51□□□□□ -0.57
PTPRC-206ENST00000413409 A0A0U1RRA0 63 aa11.5□□□□□ -0.57
PTPRC-206ENST00000413409 C16orf90A8MZG2 172 aa11.5□□□□□ -0.57
PTPRC-206ENST00000413409 K7ERU9 68 aa11.5□□□□□ -0.57
PTPRC-206ENST00000413409 TCL1BO95988 128 aa11.5□□□□□ -0.57
PTPRC-206ENST00000413409 SCGB1C2P0DMR2 95 aa11.5□□□□□ -0.57
PTPRC-206ENST00000413409 Q6ZR54 194 aa11.5□□□□□ -0.57
PTPRC-206ENST00000413409 MIR7-3HGQ8N6C7 128 aa11.5□□□□□ -0.57
PTPRC-206ENST00000413409 TRAV8-4A0A0B4J246 113 aa11.49□□□□□ -0.57
PTPRC-206ENST00000413409 H7C2G1 150 aa11.49□□□□□ -0.57
PTPRC-206ENST00000413409 TRIAP1O43715 76 aa11.49□□□□□ -0.57
PTPRC-206ENST00000413409 KIAA0087Q14695 138 aa11.49□□□□□ -0.57
PTPRC-206ENST00000413409 CFAP161Q6P656 301 aa11.49□□□□□ -0.57
PTPRC-206ENST00000413409 TRAV10A0A0B4J240 114 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms