RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 SNRPD2P62316 118 aaKnown RBP-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 RPL31P62899 125 aaKnown RBP-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 PLGLB1Q02325 96 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 STK4Q13043 487 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 Q3ZCU0 254 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 TAS2R42Q7RTR8 314 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 SLC51BQ86UW2 128 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 IFT20Q8IY31 132 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 SYCE1Q8N0S2 351 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 KCNRGQ8N5I3 272 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 OR51A7Q8NH64 312 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 FER1L6-AS2Q96M78 137 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 KAAG1Q9UBP8 84 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 SAR1BQ9Y6B6 198 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 TMEM56-RWDD3S4R434 201 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 ARL2-SNX15V9GYD0 113 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 TRPM2O94759 1503 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 DLC1Q96QB1 1528 aa-3□□□□□ -2.89
RNU4-88P-201ENST00000411220 ANKARQ7Z5J8 1434 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 MYH4Q9Y623 1939 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 UNC13AQ9UPW8 1703 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 A0A096LNI7 61 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 TMEM213A2RRL7 107 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 CHP2O43745 196 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 CALUO43852 315 aaPredicted RBP-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 SCGB1D1O95968 90 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 FTH1P02794 183 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 IFNW1P05000 195 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 CXCL1P09341 107 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 COX5BP10606 129 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 CXCL3P19876 107 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 DDTP30046 118 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 POLR2FP61218 127 aaKnown RBP-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 FAM9BQ8IZU0 186 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 FAM45AQ8TCE6 357 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 ISOC2Q96AB3 205 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 SEC11CQ9BY50 192 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 EXO5Q9H790 373 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 CHCHD3Q9NX63 227 aaKnown RBP-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 ABRACLQ9P1F3 81 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 CHMP2BQ9UQN3 213 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 CCNB3Q8WWL7 1395 aa-3.01□□□□□ -2.89
RNU4-88P-201ENST00000411220 RAPGEF2Q9Y4G8 1499 aa-3.02□□□□□ -2.89
RNU4-88P-201ENST00000411220 IL5P05113 134 aa-3.02□□□□□ -2.89
RNU4-88P-201ENST00000411220 MYL2P10916 166 aa-3.02□□□□□ -2.89
RNU4-88P-201ENST00000411220 RPL35P42766 123 aaKnown RBP-3.02□□□□□ -2.89
RNU4-88P-201ENST00000411220 STX4Q12846 297 aa-3.02□□□□□ -2.89
RNU4-88P-201ENST00000411220 TRAM1Q15629 374 aa-3.02□□□□□ -2.89
RNU4-88P-201ENST00000411220 HBMQ6B0K9 141 aa-3.02□□□□□ -2.89
RNU4-88P-201ENST00000411220 ACBD7Q8N6N7 88 aa-3.02□□□□□ -2.89
RNU4-88P-201ENST00000411220 ATP6V1E2Q96A05 226 aa-3.02□□□□□ -2.89
RNU4-88P-201ENST00000411220 CCDC43Q96MW1 224 aaKnown RBP-3.02□□□□□ -2.89
RNU4-88P-201ENST00000411220 MPHOSPH6Q99547 160 aaKnown RBP-3.02□□□□□ -2.89
RNU4-88P-201ENST00000411220 PRTFDC1Q9NRG1 225 aa-3.02□□□□□ -2.89
RNU4-88P-201ENST00000411220 HPCAL4Q9UM19 191 aa-3.02□□□□□ -2.89
RNU4-88P-201ENST00000411220 ADGBQ8N7X0 1667 aa-3.02□□□□□ -2.89
RNU4-88P-201ENST00000411220 TRBV27A0A0K0K1C4 114 aa-3.03□□□□□ -2.89
RNU4-88P-201ENST00000411220 IL10P22301 178 aa-3.03□□□□□ -2.89
RNU4-88P-201ENST00000411220 RRM2P31350 389 aa-3.03□□□□□ -2.89
RNU4-88P-201ENST00000411220 RSU1Q15404 277 aa-3.03□□□□□ -2.89
RNU4-88P-201ENST00000411220 DEFB121Q5J5C9 76 aa-3.03□□□□□ -2.89
RNU4-88P-201ENST00000411220 RESP18Q5W5W9 173 aa-3.03□□□□□ -2.89
RNU4-88P-201ENST00000411220 ATP6V1C2Q8NEY4 427 aa-3.03□□□□□ -2.89
RNU4-88P-201ENST00000411220 OR8D1Q8WZ84 308 aa-3.03□□□□□ -2.89
RNU4-88P-201ENST00000411220 GRPEL1Q9HAV7 217 aa-3.03□□□□□ -2.89
RNU4-88P-201ENST00000411220 TCOF1Q13428 1488 aaKnown RBP-3.03□□□□□ -2.9
RNU4-88P-201ENST00000411220 IFT140Q96RY7 1462 aa-3.03□□□□□ -2.9
RNU4-88P-201ENST00000411220 CRYM-AS1A6NIL9 109 aa-3.04□□□□□ -2.9
RNU4-88P-201ENST00000411220 ARPC3O15145 178 aa-3.04□□□□□ -2.9
RNU4-88P-201ENST00000411220 TIMM8AO60220 97 aaPredicted RBP-3.04□□□□□ -2.9
RNU4-88P-201ENST00000411220 CST8O60676 142 aa-3.04□□□□□ -2.9
RNU4-88P-201ENST00000411220 DPM2O94777 84 aa-3.04□□□□□ -2.9
RNU4-88P-201ENST00000411220 IFNA7P01567 189 aa-3.04□□□□□ -2.9
RNU4-88P-201ENST00000411220 PCBD1P61457 104 aa-3.04□□□□□ -2.9
RNU4-88P-201ENST00000411220 HBBP68871 147 aa-3.04□□□□□ -2.9
RNU4-88P-201ENST00000411220 SPANXN1Q5VSR9 72 aa-3.04□□□□□ -2.9
RNU4-88P-201ENST00000411220 DEFB124Q8NES8 71 aa-3.04□□□□□ -2.9
RNU4-88P-201ENST00000411220 C20orf78Q9BR46 151 aa-3.04□□□□□ -2.9
RNU4-88P-201ENST00000411220 BEX2Q9BXY8 128 aa-3.04□□□□□ -2.9
RNU4-88P-201ENST00000411220 PFDN4Q9NQP4 134 aa-3.04□□□□□ -2.9
RNU4-88P-201ENST00000411220 STX8Q9UNK0 236 aa-3.04□□□□□ -2.9
RNU4-88P-201ENST00000411220 LAMTOR2Q9Y2Q5 125 aa-3.04□□□□□ -2.9
RNU4-88P-201ENST00000411220 CCDC144AA2RUR9 1427 aa-3.04□□□□□ -2.9
RNU4-88P-201ENST00000411220 J3QLW9 94 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 FABP7O15540 132 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 TSPAN19P0C672 248 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 SMIM17P0DL12 118 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 FABP2P12104 132 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 CCL2P13500 99 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 GAP43P17677 238 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 MYL6P60660 151 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 DSTNP60981 165 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 LSM3P62310 102 aaKnown RBP-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 HIST1H1AQ02539 215 aaPredicted RBP-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 SMIM21Q3B7S5 101 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 LINC01545Q5VT33 79 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 OR9Q1Q8NGQ5 310 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 ATP6V0E2Q8NHE4 81 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 SMIM12Q96EX1 92 aa-3.05□□□□□ -2.9
RNU4-88P-201ENST00000411220 CHMP4AQ9BY43 222 aa-3.05□□□□□ -2.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms