RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 H3BRM9 83 aa11.86□□□□□ -0.51
COLCA2-201ENST00000398035 NDUFA6P56556 154 aa11.86□□□□□ -0.51
COLCA2-201ENST00000398035 C10orf25Q5T742 122 aa11.86□□□□□ -0.51
COLCA2-201ENST00000398035 BAGE3Q86Y29 109 aa11.86□□□□□ -0.51
COLCA2-201ENST00000398035 C6orf48Q9UBA6 75 aa11.86□□□□□ -0.51
COLCA2-201ENST00000398035 CXCL5P42830 114 aa11.86□□□□□ -0.51
COLCA2-201ENST00000398035 KRTAP10-4P60372 401 aaPredicted RBP11.86□□□□□ -0.51
COLCA2-201ENST00000398035 PMCHL1Q16048 86 aa11.86□□□□□ -0.51
COLCA2-201ENST00000398035 COLCA2A8K830 154 aa11.84□□□□□ -0.51
COLCA2-201ENST00000398035 HSBP1O75506 76 aa11.84□□□□□ -0.51
COLCA2-201ENST00000398035 C2orf82Q6UX34 121 aa11.84□□□□□ -0.51
COLCA2-201ENST00000398035 SRRM2Q9UQ35 2752 aaKnown RBP11.84□□□□□ -0.51
COLCA2-201ENST00000398035 IGLC3P0DOY3 106 aa11.83□□□□□ -0.52
COLCA2-201ENST00000398035 SMIM1B2RUZ4 78 aa11.82□□□□□ -0.52
COLCA2-201ENST00000398035 NDUFC2-KCTD14E9PQ53 114 aa11.82□□□□□ -0.52
COLCA2-201ENST00000398035 F8VRH5 84 aa11.82□□□□□ -0.52
COLCA2-201ENST00000398035 Q6ZRP5 223 aa11.82□□□□□ -0.52
COLCA2-201ENST00000398035 COX7B2Q8TF08 81 aa11.81□□□□□ -0.52
COLCA2-201ENST00000398035 VPS13BQ7Z7G8 4022 aa11.8□□□□□ -0.52
COLCA2-201ENST00000398035 C9orf116Q5BN46 136 aaPredicted RBP11.8□□□□□ -0.52
COLCA2-201ENST00000398035 GAGE2EQ4V326 116 aa11.79□□□□□ -0.52
COLCA2-201ENST00000398035 GAGE2DQ9UEU5 116 aa11.79□□□□□ -0.52
COLCA2-201ENST00000398035 A0A1W2PNN7 141 aa11.78□□□□□ -0.52
COLCA2-201ENST00000398035 IFI27L1Q96BM0 104 aa11.78□□□□□ -0.52
COLCA2-201ENST00000398035 TRAV12-1A0A0B4J245 112 aa11.77□□□□□ -0.52
COLCA2-201ENST00000398035 SPINK8P0C7L1 97 aa11.77□□□□□ -0.52
COLCA2-201ENST00000398035 CHTOPQ9Y3Y2 248 aaKnown RBP11.77□□□□□ -0.53
COLCA2-201ENST00000398035 ZNF22P17026 224 aaPredicted RBP11.75□□□□□ -0.53
COLCA2-201ENST00000398035 FAM19A2Q8N3H0 131 aa11.75□□□□□ -0.53
COLCA2-201ENST00000398035 IGLV5-39A0A0G2JS06 123 aa11.74□□□□□ -0.53
COLCA2-201ENST00000398035 KRTAP29-1A8MX34 341 aaPredicted RBP11.74□□□□□ -0.53
COLCA2-201ENST00000398035 SERF1AO75920 110 aa11.74□□□□□ -0.53
COLCA2-201ENST00000398035 LEPROTL1O95214 131 aa11.74□□□□□ -0.53
COLCA2-201ENST00000398035 TMEM170BQ5T4T1 132 aa11.74□□□□□ -0.53
COLCA2-201ENST00000398035 OXTP01178 125 aa11.73□□□□□ -0.53
COLCA2-201ENST00000398035 PRR3P79522 188 aaKnown RBP11.73□□□□□ -0.53
COLCA2-201ENST00000398035 SFTA2Q6UW10 78 aa11.73□□□□□ -0.53
COLCA2-201ENST00000398035 C11orf86A6NJI1 115 aa11.72□□□□□ -0.53
COLCA2-201ENST00000398035 HSPB8Q9UJY1 196 aa11.72□□□□□ -0.53
COLCA2-201ENST00000398035 J3QL48 77 aa11.71□□□□□ -0.53
COLCA2-201ENST00000398035 FLG2Q5D862 2391 aaPredicted RBP11.7□□□□□ -0.54
COLCA2-201ENST00000398035 ODF1Q14990 250 aa11.69□□□□□ -0.54
COLCA2-201ENST00000398035 C9orf129Q5T035 196 aaKnown RBP11.69□□□□□ -0.54
COLCA2-201ENST00000398035 HNRNPA3P51991 378 aaKnown RBP11.69□□□□□ -0.54
COLCA2-201ENST00000398035 PHF5AQ7RTV0 110 aaKnown RBP11.69□□□□□ -0.54
COLCA2-201ENST00000398035 FAM19A5Q7Z5A7 132 aaPredicted RBP11.69□□□□□ -0.54
COLCA2-201ENST00000398035 FAM168BA1KXE4 195 aa11.68□□□□□ -0.54
COLCA2-201ENST00000398035 LINC00310P59036 64 aa11.68□□□□□ -0.54
COLCA2-201ENST00000398035 COX17Q14061 63 aa11.67□□□□□ -0.54
COLCA2-201ENST00000398035 SPINK6Q6UWN8 80 aa11.66□□□□□ -0.54
COLCA2-201ENST00000398035 XAGE1AQ9HD64 81 aa11.66□□□□□ -0.54
COLCA2-201ENST00000398035 TMEM223A0PJW6 202 aa11.65□□□□□ -0.54
COLCA2-201ENST00000398035 M0QXV9 152 aa11.65□□□□□ -0.54
COLCA2-201ENST00000398035 NUPR1O60356 82 aa11.65□□□□□ -0.54
COLCA2-201ENST00000398035 HIST1H2BKO60814 126 aa11.65□□□□□ -0.54
COLCA2-201ENST00000398035 HIST1H2BJP06899 126 aa11.65□□□□□ -0.54
COLCA2-201ENST00000398035 HIST1H2BOP23527 126 aa11.65□□□□□ -0.54
COLCA2-201ENST00000398035 HIST1H2BBP33778 126 aa11.65□□□□□ -0.54
COLCA2-201ENST00000398035 HIST1H2BDP58876 126 aa11.65□□□□□ -0.54
COLCA2-201ENST00000398035 HIST1H2BCP62807 126 aa11.65□□□□□ -0.54
COLCA2-201ENST00000398035 HIST2H2BEQ16778 126 aa11.65□□□□□ -0.54
COLCA2-201ENST00000398035 LBHQ53QV2 105 aaPredicted RBP11.65□□□□□ -0.54
COLCA2-201ENST00000398035 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.65□□□□□ -0.54
COLCA2-201ENST00000398035 HIST1H2BHQ93079 126 aa11.65□□□□□ -0.54
COLCA2-201ENST00000398035 HIST1H2BNQ99877 126 aa11.65□□□□□ -0.54
COLCA2-201ENST00000398035 HIST1H2BMQ99879 126 aa11.65□□□□□ -0.54
COLCA2-201ENST00000398035 PSORS1C2Q9UIG4 136 aa11.65□□□□□ -0.54
COLCA2-201ENST00000398035 H0Y8G0 127 aa11.63□□□□□ -0.55
COLCA2-201ENST00000398035 FABP4P15090 132 aa11.63□□□□□ -0.55
COLCA2-201ENST00000398035 PLNP26678 52 aa11.63□□□□□ -0.55
COLCA2-201ENST00000398035 UBE2BP63146 152 aa11.63□□□□□ -0.55
COLCA2-201ENST00000398035 MAP1LC3CQ9BXW4 147 aa11.63□□□□□ -0.55
COLCA2-201ENST00000398035 KRTAP7-1Q8IUC3 87 aa11.62□□□□□ -0.55
COLCA2-201ENST00000398035 TP73-AS1Q9UF72 201 aa11.62□□□□□ -0.55
COLCA2-201ENST00000398035 MYCBP2O75592 4640 aa11.62□□□□□ -0.55
COLCA2-201ENST00000398035 PFN2P35080 140 aa11.61□□□□□ -0.55
COLCA2-201ENST00000398035 SRSF9Q13242 221 aaKnown RBP eCLIP11.61□□□□□ -0.55
COLCA2-201ENST00000398035 C1orf137Q5JT78 98 aa11.61□□□□□ -0.55
COLCA2-201ENST00000398035 ERG28Q9UKR5 140 aa11.61□□□□□ -0.55
COLCA2-201ENST00000398035 PLA2G2DQ9UNK4 145 aa11.61□□□□□ -0.55
COLCA2-201ENST00000398035 C22orf24Q9Y442 160 aa11.61□□□□□ -0.55
COLCA2-201ENST00000398035 DMBT1Q9UGM3 2413 aaPredicted RBP11.61□□□□□ -0.55
COLCA2-201ENST00000398035 SERTAD4-AS1Q5TG53 156 aa11.6□□□□□ -0.55
COLCA2-201ENST00000398035 ZNF625Q96I27 306 aaPredicted RBP11.6□□□□□ -0.55
COLCA2-201ENST00000398035 LINC00587B1AMM8 73 aa11.59□□□□□ -0.55
COLCA2-201ENST00000398035 REG3GQ6UW15 175 aa11.59□□□□□ -0.55
COLCA2-201ENST00000398035 DPM2O94777 84 aa11.58□□□□□ -0.56
COLCA2-201ENST00000398035 MRPL55Q7Z7F7 128 aaKnown RBP11.58□□□□□ -0.56
COLCA2-201ENST00000398035 HERV-K104P63124 156 aa11.57□□□□□ -0.56
COLCA2-201ENST00000398035 LINC00518Q8N0U6 118 aa11.57□□□□□ -0.56
COLCA2-201ENST00000398035 IGLV7-43P04211 117 aa11.56□□□□□ -0.56
COLCA2-201ENST00000398035 HERVK_113P61574 105 aa11.56□□□□□ -0.56
COLCA2-201ENST00000398035 IGKCP01834 107 aa11.55□□□□□ -0.56
COLCA2-201ENST00000398035 RPL24P83731 157 aaKnown RBP11.55□□□□□ -0.56
COLCA2-201ENST00000398035 NKAPP1Q8N9T2 125 aa11.55□□□□□ -0.56
COLCA2-201ENST00000398035 IGLV5-37A0A075B6J1 123 aa11.54□□□□□ -0.56
COLCA2-201ENST00000398035 MYMXA0A1B0GTQ4 84 aa11.54□□□□□ -0.56
COLCA2-201ENST00000398035 LINC00158P58513 81 aa11.54□□□□□ -0.56
COLCA2-201ENST00000398035 COA6Q5JTJ3 125 aaKnown RBP11.54□□□□□ -0.56
COLCA2-201ENST00000398035 PLEKHB2Q96CS7 222 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms