RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 A0A1W2PNN7 141 aa8.67□□□□□ -1.02
SEC13-204ENST00000397099 RAB5BP61020 215 aa8.67□□□□□ -1.02
SEC13-204ENST00000397099 PMVKQ15126 192 aa8.67□□□□□ -1.02
SEC13-204ENST00000397099 ZC2HC1BQ5TFG8 222 aa8.67□□□□□ -1.02
SEC13-204ENST00000397099 REG3GQ6UW15 175 aa8.67□□□□□ -1.02
SEC13-204ENST00000397099 LINC00614P0C842 121 aa8.66□□□□□ -1.02
SEC13-204ENST00000397099 ODF1Q14990 250 aa8.66□□□□□ -1.02
SEC13-204ENST00000397099 LINC00469Q8N7U9 141 aa8.66□□□□□ -1.02
SEC13-204ENST00000397099 CST9LQ9H4G1 147 aa8.66□□□□□ -1.02
SEC13-204ENST00000397099 TOMM7Q9P0U1 55 aa8.66□□□□□ -1.02
SEC13-204ENST00000397099 CDKN2A-AS1Q9UH64 79 aa8.66□□□□□ -1.02
SEC13-204ENST00000397099 IGLV5-45A0A087WSX0 123 aa8.65□□□□□ -1.02
SEC13-204ENST00000397099 F8VRH5 84 aa8.65□□□□□ -1.02
SEC13-204ENST00000397099 PDZD11Q5EBL8 140 aa8.65□□□□□ -1.02
SEC13-204ENST00000397099 H3BRM9 83 aa8.64□□□□□ -1.03
SEC13-204ENST00000397099 GAGE2EQ4V326 116 aa8.64□□□□□ -1.03
SEC13-204ENST00000397099 C2orf82Q6UX34 121 aa8.64□□□□□ -1.03
SEC13-204ENST00000397099 GAGE2DQ9UEU5 116 aa8.64□□□□□ -1.03
SEC13-204ENST00000397099 HBDP02042 147 aa8.63□□□□□ -1.03
SEC13-204ENST00000397099 SRSF9Q13242 221 aaKnown RBP eCLIP8.63□□□□□ -1.03
SEC13-204ENST00000397099 C18orf32Q8TCD1 76 aa8.63□□□□□ -1.03
SEC13-204ENST00000397099 LINC01600Q96MT4 127 aa8.63□□□□□ -1.03
SEC13-204ENST00000397099 PSORS1C2Q9UIG4 136 aa8.63□□□□□ -1.03
SEC13-204ENST00000397099 SMIM1B2RUZ4 78 aa8.62□□□□□ -1.03
SEC13-204ENST00000397099 ATP5LO75964 103 aa8.62□□□□□ -1.03
SEC13-204ENST00000397099 MT1HL1P0DM35 61 aa8.62□□□□□ -1.03
SEC13-204ENST00000397099 PHF5AQ7RTV0 110 aaKnown RBP8.61□□□□□ -1.03
SEC13-204ENST00000397099 COX7B2Q8TF08 81 aa8.61□□□□□ -1.03
SEC13-204ENST00000397099 TNXBP22105 4242 aa8.6□□□□□ -1.03
SEC13-204ENST00000397099 M0QXV9 152 aa8.6□□□□□ -1.03
SEC13-204ENST00000397099 FAM19A5Q7Z5A7 132 aaPredicted RBP8.6□□□□□ -1.03
SEC13-204ENST00000397099 C1orf137Q5JT78 98 aa8.59□□□□□ -1.03
SEC13-204ENST00000397099 FAM168BA1KXE4 195 aa8.58□□□□□ -1.04
SEC13-204ENST00000397099 IGLC3P0DOY3 106 aa8.58□□□□□ -1.04
SEC13-204ENST00000397099 UBE2BP63146 152 aa8.58□□□□□ -1.04
SEC13-204ENST00000397099 LBHQ53QV2 105 aaPredicted RBP8.58□□□□□ -1.04
SEC13-204ENST00000397099 SFTA2Q6UW10 78 aa8.58□□□□□ -1.04
SEC13-204ENST00000397099 DIRC1Q969H9 104 aa8.58□□□□□ -1.04
SEC13-204ENST00000397099 CHCHD1Q96BP2 118 aaKnown RBP8.58□□□□□ -1.04
SEC13-204ENST00000397099 HMCN2Q8NDA2 5059 aa8.58□□□□□ -1.04
SEC13-204ENST00000397099 NDUFA6P56556 154 aa8.57□□□□□ -1.04
SEC13-204ENST00000397099 C9orf129Q5T035 196 aaKnown RBP8.57□□□□□ -1.04
SEC13-204ENST00000397099 YPEL4Q96NS1 127 aa8.57□□□□□ -1.04
SEC13-204ENST00000397099 TP73-AS1Q9UF72 201 aa8.57□□□□□ -1.04
SEC13-204ENST00000397099 A0A096LNJ9 63 aa8.56□□□□□ -1.04
SEC13-204ENST00000397099 IGLV7-43P04211 117 aa8.56□□□□□ -1.04
SEC13-204ENST00000397099 URB1-AS1Q96HZ7 61 aa8.56□□□□□ -1.04
SEC13-204ENST00000397099 SPINK8P0C7L1 97 aa8.55□□□□□ -1.04
SEC13-204ENST00000397099 IGLV5-39A0A0G2JS06 123 aa8.54□□□□□ -1.04
SEC13-204ENST00000397099 NUPR1O60356 82 aa8.54□□□□□ -1.04
SEC13-204ENST00000397099 COX17Q14061 63 aa8.53□□□□□ -1.04
SEC13-204ENST00000397099 BAGE3Q86Y29 109 aa8.53□□□□□ -1.04
SEC13-204ENST00000397099 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
SEC13-204ENST00000397099 XAGE1AQ9HD64 81 aa8.53□□□□□ -1.04
SEC13-204ENST00000397099 C22orf24Q9Y442 160 aa8.53□□□□□ -1.04
SEC13-204ENST00000397099 TRAV12-1A0A0B4J245 112 aa8.52□□□□□ -1.05
SEC13-204ENST00000397099 ZNF22P17026 224 aaPredicted RBP8.52□□□□□ -1.05
SEC13-204ENST00000397099 KRTAP10-8P60410 259 aa8.52□□□□□ -1.05
SEC13-204ENST00000397099 PMCHL1Q16048 86 aa8.52□□□□□ -1.05
SEC13-204ENST00000397099 H0Y9J4 135 aa8.51□□□□□ -1.05
SEC13-204ENST00000397099 MRPL55Q7Z7F7 128 aaKnown RBP8.51□□□□□ -1.05
SEC13-204ENST00000397099 HSBP1O75506 76 aa8.5□□□□□ -1.05
SEC13-204ENST00000397099 TMEM170BQ5T4T1 132 aa8.5□□□□□ -1.05
SEC13-204ENST00000397099 IFI27L1Q96BM0 104 aa8.5□□□□□ -1.05
SEC13-204ENST00000397099 CHTOPQ9Y3Y2 248 aaKnown RBP8.5□□□□□ -1.05
SEC13-204ENST00000397099 IGLV5-37A0A075B6J1 123 aa8.49□□□□□ -1.05
SEC13-204ENST00000397099 CBLN2Q8IUK8 224 aa8.49□□□□□ -1.05
SEC13-204ENST00000397099 C11orf86A6NJI1 115 aa8.48□□□□□ -1.05
SEC13-204ENST00000397099 NKAPP1Q8N9T2 125 aa8.48□□□□□ -1.05
SEC13-204ENST00000397099 ZNF861PO60384 105 aa8.47□□□□□ -1.05
SEC13-204ENST00000397099 KRTAP11-1Q8IUC1 163 aa8.47□□□□□ -1.05
SEC13-204ENST00000397099 ERG28Q9UKR5 140 aa8.47□□□□□ -1.05
SEC13-204ENST00000397099 IGLV1-50A0A075B6I6 118 aa8.46□□□□□ -1.06
SEC13-204ENST00000397099 TRGC2P03986 189 aa8.46□□□□□ -1.06
SEC13-204ENST00000397099 RPL24P83731 157 aaKnown RBP8.46□□□□□ -1.06
SEC13-204ENST00000397099 PFN2P35080 140 aa8.45□□□□□ -1.06
SEC13-204ENST00000397099 RPL13AP40429 203 aaKnown RBP8.45□□□□□ -1.06
SEC13-204ENST00000397099 RPL28P46779 137 aaKnown RBP8.45□□□□□ -1.06
SEC13-204ENST00000397099 TMEM223A0PJW6 202 aa8.44□□□□□ -1.06
SEC13-204ENST00000397099 LINC00587B1AMM8 73 aa8.44□□□□□ -1.06
SEC13-204ENST00000397099 BCE1O60756 84 aa8.44□□□□□ -1.06
SEC13-204ENST00000397099 LINC00167Q96N53 147 aa8.44□□□□□ -1.06
SEC13-204ENST00000397099 LEPROTL1O95214 131 aa8.43□□□□□ -1.06
SEC13-204ENST00000397099 SLC7A5P1Q8MH63 180 aa8.43□□□□□ -1.06
SEC13-204ENST00000397099 ZNF625Q96I27 306 aaPredicted RBP8.43□□□□□ -1.06
SEC13-204ENST00000397099 HSPB8Q9UJY1 196 aa8.43□□□□□ -1.06
SEC13-204ENST00000397099 UBR4Q5T4S7 5183 aa8.43□□□□□ -1.06
SEC13-204ENST00000397099 HERV-K104P63124 156 aa8.42□□□□□ -1.06
SEC13-204ENST00000397099 SND1-IT1Q9HBX3 110 aa8.42□□□□□ -1.06
SEC13-204ENST00000397099 PLNP26678 52 aa8.41□□□□□ -1.06
SEC13-204ENST00000397099 FAM19A2Q8N3H0 131 aa8.41□□□□□ -1.06
SEC13-204ENST00000397099 COLCA2A8K830 154 aa8.4□□□□□ -1.06
SEC13-204ENST00000397099 ATP6V1G1O75348 118 aa8.4□□□□□ -1.06
SEC13-204ENST00000397099 SERF1AO75920 110 aa8.4□□□□□ -1.06
SEC13-204ENST00000397099 RPL37AP8A6NKH3 93 aa8.39□□□□□ -1.07
SEC13-204ENST00000397099 KRTAP1-4P0C5Y4 121 aa8.39□□□□□ -1.07
SEC13-204ENST00000397099 VPREB1P12018 145 aa8.39□□□□□ -1.07
SEC13-204ENST00000397099 LINC00158P58513 81 aa8.39□□□□□ -1.07
SEC13-204ENST00000397099 GAGE10A6NGK3 116 aa8.38□□□□□ -1.07
SEC13-204ENST00000397099 PRR26Q8N8Z3 221 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms