RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 DNAJC9-AS1A6NH13 148 aa10.17□□□□□ -0.78
RTF1-201ENST00000389629 C3orf84H3BNL1 204 aa10.17□□□□□ -0.78
RTF1-201ENST00000389629 Q8N814 137 aa10.17□□□□□ -0.78
RTF1-201ENST00000389629 NTM-AS1Q6ZSK4 140 aa10.17□□□□□ -0.78
RTF1-201ENST00000389629 LRRK2Q5S007 2527 aa10.17□□□□□ -0.78
RTF1-201ENST00000389629 UBE2BP63146 152 aa10.16□□□□□ -0.78
RTF1-201ENST00000389629 ZNF462Q96JM2 2506 aa10.16□□□□□ -0.78
RTF1-201ENST00000389629 SMIM26A0A096LP01 95 aa10.16□□□□□ -0.78
RTF1-201ENST00000389629 ETDCA0A1B0GVM5 59 aa10.16□□□□□ -0.78
RTF1-201ENST00000389629 TRAV7A0A075B6U4 112 aa10.16□□□□□ -0.78
RTF1-201ENST00000389629 C1orf158Q8N1D5 194 aa10.16□□□□□ -0.78
RTF1-201ENST00000389629 H3BQ85 93 aa10.15□□□□□ -0.78
RTF1-201ENST00000389629 KLK9Q2XQG4 91 aa10.15□□□□□ -0.78
RTF1-201ENST00000389629 SERP1Q9Y6X1 66 aa10.15□□□□□ -0.78
RTF1-201ENST00000389629 USP34Q70CQ2 3546 aa10.15□□□□□ -0.78
RTF1-201ENST00000389629 IGLV5-39A0A0G2JS06 123 aa10.15□□□□□ -0.78
RTF1-201ENST00000389629 PRR4Q16378 134 aa10.15□□□□□ -0.78
RTF1-201ENST00000389629 APOC4P55056 127 aa10.15□□□□□ -0.79
RTF1-201ENST00000389629 PRORYQ9H606 182 aa10.15□□□□□ -0.79
RTF1-201ENST00000389629 A8MTW9 85 aa10.14□□□□□ -0.79
RTF1-201ENST00000389629 BEAN1Q3B7T3 259 aa10.14□□□□□ -0.79
RTF1-201ENST00000389629 RMI2Q96E14 147 aa10.14□□□□□ -0.79
RTF1-201ENST00000389629 LRCOL1A6NCL2 159 aa10.14□□□□□ -0.79
RTF1-201ENST00000389629 V9GYY9 64 aa10.14□□□□□ -0.79
RTF1-201ENST00000389629 BBC3Q96PG8 261 aaPredicted RBP10.13□□□□□ -0.79
RTF1-201ENST00000389629 MIFP14174 115 aa10.13□□□□□ -0.79
RTF1-201ENST00000389629 Q8N3U1 123 aa10.13□□□□□ -0.79
RTF1-201ENST00000389629 A0A087WZ39 114 aa10.12□□□□□ -0.79
RTF1-201ENST00000389629 NDUFC1O43677 76 aa10.11□□□□□ -0.79
RTF1-201ENST00000389629 ZFYVE26Q68DK2 2539 aa10.11□□□□□ -0.79
RTF1-201ENST00000389629 MP68P56378 58 aa10.11□□□□□ -0.79
RTF1-201ENST00000389629 C11orf72Q8NBR9 251 aa10.11□□□□□ -0.79
RTF1-201ENST00000389629 ZNF843Q8N446 348 aa10.11□□□□□ -0.79
RTF1-201ENST00000389629 C1orf195Q5TG92 126 aa10.1□□□□□ -0.79
RTF1-201ENST00000389629 FAM19A3Q7Z5A8 133 aa10.1□□□□□ -0.79
RTF1-201ENST00000389629 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.1□□□□□ -0.79
RTF1-201ENST00000389629 CD164L2Q6UWJ8 174 aa10.1□□□□□ -0.79
RTF1-201ENST00000389629 SPART-AS1P0CW21 52 aa10.1□□□□□ -0.79
RTF1-201ENST00000389629 Q8IZM0 81 aa10.1□□□□□ -0.79
RTF1-201ENST00000389629 DEFB121Q5J5C9 76 aa10.09□□□□□ -0.79
RTF1-201ENST00000389629 CELA1Q9UNI1 258 aa10.09□□□□□ -0.79
RTF1-201ENST00000389629 PLA2G2AP14555 144 aa10.09□□□□□ -0.79
RTF1-201ENST00000389629 RPS28P62857 69 aaKnown RBP10.09□□□□□ -0.79
RTF1-201ENST00000389629 UNQ6190/PRO20217Q6UXQ8 127 aa10.09□□□□□ -0.79
RTF1-201ENST00000389629 SPTSSBQ8NFR3 76 aa10.09□□□□□ -0.79
RTF1-201ENST00000389629 BOD1L1Q8NFC6 3051 aa10.08□□□□□ -0.8
RTF1-201ENST00000389629 DOPEY1Q5JWR5 2465 aa10.07□□□□□ -0.8
RTF1-201ENST00000389629 ANKRD17O75179 2603 aaKnown RBP10.07□□□□□ -0.8
RTF1-201ENST00000389629 IGLV5-45A0A087WSX0 123 aa10.07□□□□□ -0.8
RTF1-201ENST00000389629 PSCAO43653 123 aa10.06□□□□□ -0.8
RTF1-201ENST00000389629 Q6ZVQ6 151 aa10.06□□□□□ -0.8
RTF1-201ENST00000389629 COL6A3P12111 3177 aa10.06□□□□□ -0.8
RTF1-201ENST00000389629 CDK2AP2O75956 126 aa10.06□□□□□ -0.8
RTF1-201ENST00000389629 ATP5EP56381 51 aaPredicted RBP10.05□□□□□ -0.8
RTF1-201ENST00000389629 LINC01547P58512 204 aaPredicted RBP10.05□□□□□ -0.8
RTF1-201ENST00000389629 MAP1AP78559 2803 aaPredicted RBP10.05□□□□□ -0.8
RTF1-201ENST00000389629 LINC00482Q8N8I6 264 aa10.05□□□□□ -0.8
RTF1-201ENST00000389629 FAM30AQ9NZY2 134 aa10.05□□□□□ -0.8
RTF1-201ENST00000389629 CYSRT1A8MQ03 144 aa10.04□□□□□ -0.8
RTF1-201ENST00000389629 IGKV2-28A0A075B6P5 120 aa10.04□□□□□ -0.8
RTF1-201ENST00000389629 ZNF73O43830 326 aaPredicted RBP10.04□□□□□ -0.8
RTF1-201ENST00000389629 IGKV2D-28P01615 120 aa10.04□□□□□ -0.8
RTF1-201ENST00000389629 ACANP16112 2415 aa10.03□□□□□ -0.8
RTF1-201ENST00000389629 TRBV10-3A0A0K0K1G6 114 aa10.03□□□□□ -0.8
RTF1-201ENST00000389629 FHL2Q14192 279 aa10.02□□□□□ -0.8
RTF1-201ENST00000389629 C9orf66Q5T8R8 295 aa10.02□□□□□ -0.81
RTF1-201ENST00000389629 Q8N9L7 120 aa10.02□□□□□ -0.81
RTF1-201ENST00000389629 NDUFS5O43920 106 aa10.02□□□□□ -0.81
RTF1-201ENST00000389629 TRBV7-6A0A0J9YX20 115 aa10.01□□□□□ -0.81
RTF1-201ENST00000389629 COX17Q14061 63 aa10.01□□□□□ -0.81
RTF1-201ENST00000389629 IGHV3OR16-9A0A0B4J2B5 98 aa10.01□□□□□ -0.81
RTF1-201ENST00000389629 LINC01006Q8NI28 216 aa10.01□□□□□ -0.81
RTF1-201ENST00000389629 C6orf223Q8N319 242 aa10□□□□□ -0.81
RTF1-201ENST00000389629 PRO0628Q9UI54 55 aa10□□□□□ -0.81
RTF1-201ENST00000389629 LINC01561Q8N1V8 128 aa10□□□□□ -0.81
RTF1-201ENST00000389629 TMEM254Q8TBM7 123 aa10□□□□□ -0.81
RTF1-201ENST00000389629 KRTAP10-9P60411 292 aa9.99□□□□□ -0.81
RTF1-201ENST00000389629 ADGRG4Q8IZF6 3080 aa9.99□□□□□ -0.81
RTF1-201ENST00000389629 LINC00575Q6W349 94 aa9.99□□□□□ -0.81
RTF1-201ENST00000389629 NANOS2P60321 138 aaKnown RBP9.99□□□□□ -0.81
RTF1-201ENST00000389629 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.99□□□□□ -0.81
RTF1-201ENST00000389629 LYRM9A8MSI8 78 aa9.98□□□□□ -0.81
RTF1-201ENST00000389629 WFDC10BQ8IUB3 73 aa9.98□□□□□ -0.81
RTF1-201ENST00000389629 PRYO14603 147 aa9.97□□□□□ -0.81
RTF1-201ENST00000389629 WFDC13Q8IUB5 93 aa9.97□□□□□ -0.81
RTF1-201ENST00000389629 KALRNO60229 2985 aa9.96□□□□□ -0.81
RTF1-201ENST00000389629 AKAP13Q12802 2813 aa9.96□□□□□ -0.81
RTF1-201ENST00000389629 UBE2DNLQ8IWF7 75 aa9.96□□□□□ -0.81
RTF1-201ENST00000389629 MUC7Q8TAX7 377 aa9.96□□□□□ -0.81
RTF1-201ENST00000389629 EPG5Q9HCE0 2579 aa9.96□□□□□ -0.82
RTF1-201ENST00000389629 CENPEQ02224 2701 aa9.95□□□□□ -0.82
RTF1-201ENST00000389629 TRAV10A0A0B4J240 114 aa9.95□□□□□ -0.82
RTF1-201ENST00000389629 ZNF292O60281 2723 aa9.95□□□□□ -0.82
RTF1-201ENST00000389629 A0A096LNI7 61 aa9.95□□□□□ -0.82
RTF1-201ENST00000389629 F8P00451 2351 aa9.95□□□□□ -0.82
RTF1-201ENST00000389629 PSPHP1O15172 72 aa9.95□□□□□ -0.82
RTF1-201ENST00000389629 C9orf129Q5T035 196 aaKnown RBP9.95□□□□□ -0.82
RTF1-201ENST00000389629 HIGD2AQ9BW72 106 aa9.94□□□□□ -0.82
RTF1-201ENST00000389629 M0R378 163 aa9.94□□□□□ -0.82
RTF1-201ENST00000389629 H0Y9J4 135 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms