RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 PKIAP61925 76 aa-2.4□□□□□ -2.79
RNU6-540P-201ENST00000384622 YWHAGP61981 247 aaKnown RBP eCLIP-2.4□□□□□ -2.79
RNU6-540P-201ENST00000384622 MED21Q13503 144 aa-2.4□□□□□ -2.79
RNU6-540P-201ENST00000384622 DEFB114Q30KQ6 69 aa-2.4□□□□□ -2.79
RNU6-540P-201ENST00000384622 MRPL54Q6P161 138 aaKnown RBP-2.4□□□□□ -2.79
RNU6-540P-201ENST00000384622 DNAJC9Q8WXX5 260 aa-2.4□□□□□ -2.79
RNU6-540P-201ENST00000384622 DYNLRB1Q9NP97 96 aa-2.4□□□□□ -2.79
RNU6-540P-201ENST00000384622 HPCAL4Q9UM19 191 aa-2.4□□□□□ -2.79
RNU6-540P-201ENST00000384622 LAMTOR2Q9Y2Q5 125 aa-2.4□□□□□ -2.79
RNU6-540P-201ENST00000384622 DUOX1Q9NRD9 1551 aa-2.4□□□□□ -2.79
RNU6-540P-201ENST00000384622 CEP162Q5TB80 1403 aa-2.41□□□□□ -2.79
RNU6-540P-201ENST00000384622 IGHV1-69-2A0A0G2JMI3 117 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 CCDC182A6NF36 153 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 DEFB108AA8MXU0 73 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 B4DEV8 164 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 H0YIV9 168 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 DFFAO00273 331 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 PDCD5O14737 125 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 UQCRQO14949 82 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 ENSAO43768 121 aaKnown RBP-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 MRPL33O75394 65 aaKnown RBP-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 HBZP02008 142 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 CXCL3P19876 107 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 MARCKSP29966 332 aaPredicted RBP-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 IDI1Q13907 227 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 SSX2Q16385 188 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 WHAMMP3Q1A5X7 153 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 FAM133AQ8N9E0 248 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 MNS1Q8NEH6 495 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 CCDC115Q96NT0 180 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 DRC3Q9H069 523 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 OLA1Q9NTK5 396 aaKnown RBP-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 LINC00312Q9Y6C7 94 aa-2.41□□□□□ -2.8
RNU6-540P-201ENST00000384622 EPRSP07814 1512 aaKnown RBP-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 A0A1B0GWA3 101 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 IGLC7A0M8Q6 106 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 SYCE1LA8MT33 242 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 FABP5P3A8MUU1 101 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 EEF1E1-BLOC1S5C9J1V9 151 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 K7EN84 100 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 ATOX1O00244 68 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 CETN3O15182 167 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 CXCL10P02778 98 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 OCMP0CE72 109 aaPredicted RBP-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 SERPINB5P36952 375 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 HSD52Q0P140 79 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 MIR17HGQ75NE6 70 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 MCFD2Q8NI22 146 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 C1orf54Q8WWF1 131 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 SEC62Q99442 399 aaKnown RBP-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 C2orf88Q9BSF0 95 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 GON7Q9BXV9 100 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 PRNDQ9UKY0 176 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 PRELID3BQ9Y3B1 194 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 LINC01558Q9Y6Z2 57 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 IFT140Q96RY7 1462 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 ADCY10Q96PN6 1610 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 SYCP2Q9BX26 1530 aa-2.42□□□□□ -2.8
RNU6-540P-201ENST00000384622 F8WDY8 70 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 H0Y9P7 68 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 MRASO14807 208 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 PPP1R2P9O14990 202 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 TRACP01848 142 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 CCDC175P0C221 793 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 FAM58BPP0C7Q3 252 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 IGLC1P0CG04 106 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 S100A7P31151 101 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 CCL11P51671 97 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 GABARAPL2P60520 117 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 SPCS3P61009 180 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 UBE2G1P62253 170 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 RPS14P62263 151 aaKnown RBP-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 RPL10AP62906 217 aaKnown RBP-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 HPCAP84074 193 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 HIST1H1AQ02539 215 aaPredicted RBP-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 BEX5Q5H9J7 111 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 CENPQQ7L2Z9 268 aaPredicted RBP-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 DEFB107AQ8IZN7 70 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 OR9Q1Q8NGQ5 310 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 FAM45AQ8TCE6 357 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 EFCAB11Q9BUY7 163 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 LINC00470Q9BZP3 86 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 C19orf12Q9NSK7 152 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 ARL2-SNX15V9GYD0 113 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 ABCA6Q8N139 1617 aa-2.43□□□□□ -2.8
RNU6-540P-201ENST00000384622 A6NIN4 97 aa-2.44□□□□□ -2.8
RNU6-540P-201ENST00000384622 ATP6V1G1O75348 118 aa-2.44□□□□□ -2.8
RNU6-540P-201ENST00000384622 RRM2P31350 389 aa-2.44□□□□□ -2.8
RNU6-540P-201ENST00000384622 HBG1P69891 147 aa-2.44□□□□□ -2.8
RNU6-540P-201ENST00000384622 HBG2P69892 147 aa-2.44□□□□□ -2.8
RNU6-540P-201ENST00000384622 SYPL2Q5VXT5 272 aa-2.44□□□□□ -2.8
RNU6-540P-201ENST00000384622 PRNTQ86SH4 94 aa-2.44□□□□□ -2.8
RNU6-540P-201ENST00000384622 FAM228AQ86W67 206 aa-2.44□□□□□ -2.8
RNU6-540P-201ENST00000384622 ZBTB8OSQ8IWT0 167 aa-2.44□□□□□ -2.8
RNU6-540P-201ENST00000384622 HIST3H2BBQ8N257 126 aa-2.44□□□□□ -2.8
RNU6-540P-201ENST00000384622 MORN4Q8NDC4 146 aa-2.44□□□□□ -2.8
RNU6-540P-201ENST00000384622 PPDPFLQ8WWR9 84 aa-2.44□□□□□ -2.8
RNU6-540P-201ENST00000384622 KCNQ1DNQ9H478 68 aa-2.44□□□□□ -2.8
RNU6-540P-201ENST00000384622 TMBIM4Q9HC24 238 aa-2.44□□□□□ -2.8
RNU6-540P-201ENST00000384622 CBLN4Q9NTU7 201 aa-2.44□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms