RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 PRYO14603 147 aa17.03■□□□□ 0.32
RAPGEF1-203ENST00000372195 EGFEM1PQ0D2K5 195 aa17.01■□□□□ 0.31
RAPGEF1-203ENST00000372195 Q8N3U1 123 aa17.01■□□□□ 0.31
RAPGEF1-203ENST00000372195 LINC01547P58512 204 aaPredicted RBP17.01■□□□□ 0.31
RAPGEF1-203ENST00000372195 LINC00575Q6W349 94 aa17.01■□□□□ 0.31
RAPGEF1-203ENST00000372195 Q6ZVQ6 151 aa16.99■□□□□ 0.31
RAPGEF1-203ENST00000372195 LINC00474Q9P2X8 69 aa16.98■□□□□ 0.31
RAPGEF1-203ENST00000372195 PMAIP1Q13794 54 aa16.98■□□□□ 0.31
RAPGEF1-203ENST00000372195 BEAN1Q3B7T3 259 aa16.97■□□□□ 0.31
RAPGEF1-203ENST00000372195 C10orf142B7Z368 130 aa16.97■□□□□ 0.31
RAPGEF1-203ENST00000372195 PTPN13Q12923 2485 aa16.96■□□□□ 0.31
RAPGEF1-203ENST00000372195 Q9BRP9 147 aa16.96■□□□□ 0.3
RAPGEF1-203ENST00000372195 LINC01556Q5JQF7 62 aa16.95■□□□□ 0.3
RAPGEF1-203ENST00000372195 NAV3Q8IVL0 2385 aa16.95■□□□□ 0.3
RAPGEF1-203ENST00000372195 PRRC2AP48634 2157 aaKnown RBP16.95■□□□□ 0.3
RAPGEF1-203ENST00000372195 CUL9Q8IWT3 2517 aa16.94■□□□□ 0.3
RAPGEF1-203ENST00000372195 LINC00846Q9NV44 126 aa16.93■□□□□ 0.3
RAPGEF1-203ENST00000372195 TRBV7-6A0A0J9YX20 115 aa16.93■□□□□ 0.3
RAPGEF1-203ENST00000372195 HIVEP3Q5T1R4 2406 aa16.93■□□□□ 0.3
RAPGEF1-203ENST00000372195 COL5A1P20908 1838 aaPredicted RBP16.92■□□□□ 0.3
RAPGEF1-203ENST00000372195 IGLV5-52A0A0A0MRZ9 124 aa16.92■□□□□ 0.3
RAPGEF1-203ENST00000372195 ADAMTS20P59510 1910 aa16.91■□□□□ 0.3
RAPGEF1-203ENST00000372195 X6R8D5 127 aa16.91■□□□□ 0.3
RAPGEF1-203ENST00000372195 LYPD5Q6UWN5 251 aa16.9■□□□□ 0.3
RAPGEF1-203ENST00000372195 A0A087WSZ3 146 aa16.9■□□□□ 0.3
RAPGEF1-203ENST00000372195 TRBV7-7A0A0K0K1E9 115 aa16.9■□□□□ 0.3
RAPGEF1-203ENST00000372195 COX8CQ7Z4L0 72 aa16.9■□□□□ 0.3
RAPGEF1-203ENST00000372195 SPINK1P00995 79 aa16.89■□□□□ 0.29
RAPGEF1-203ENST00000372195 MUC7Q8TAX7 377 aa16.89■□□□□ 0.29
RAPGEF1-203ENST00000372195 Q6ZRU5 148 aa16.88■□□□□ 0.29
RAPGEF1-203ENST00000372195 CDIP1Q9H305 208 aa16.88■□□□□ 0.29
RAPGEF1-203ENST00000372195 Q9UF83 564 aa16.88■□□□□ 0.29
RAPGEF1-203ENST00000372195 LINC00337Q8N6G1 96 aa16.87■□□□□ 0.29
RAPGEF1-203ENST00000372195 CSDC2Q9Y534 153 aaKnown RBP16.87■□□□□ 0.29
RAPGEF1-203ENST00000372195 PRLHP81277 87 aa16.87■□□□□ 0.29
RAPGEF1-203ENST00000372195 SBSPONQ8IVN8 264 aa16.86■□□□□ 0.29
RAPGEF1-203ENST00000372195 TTC28Q96AY4 2481 aa16.86■□□□□ 0.29
RAPGEF1-203ENST00000372195 EP400Q96L91 3159 aa16.86■□□□□ 0.29
RAPGEF1-203ENST00000372195 H0Y9P7 68 aa16.85■□□□□ 0.29
RAPGEF1-203ENST00000372195 AGRNO00468 2067 aa16.84■□□□□ 0.29
RAPGEF1-203ENST00000372195 NUPR2A6NF83 97 aa16.84■□□□□ 0.29
RAPGEF1-203ENST00000372195 CRYGAP11844 174 aa16.83■□□□□ 0.29
RAPGEF1-203ENST00000372195 ACACBO00763 2458 aa16.83■□□□□ 0.28
RAPGEF1-203ENST00000372195 C16orf95Q9H693 158 aa16.81■□□□□ 0.28
RAPGEF1-203ENST00000372195 SONP18583 2426 aaKnown RBP16.81■□□□□ 0.28
RAPGEF1-203ENST00000372195 NOTCH2Q04721 2471 aa16.8■□□□□ 0.28
RAPGEF1-203ENST00000372195 TMEM254Q8TBM7 123 aa16.78■□□□□ 0.28
RAPGEF1-203ENST00000372195 A0A1B0GUV1 79 aa16.77■□□□□ 0.28
RAPGEF1-203ENST00000372195 KIF25-AS1Q9Y6Z4 181 aa16.77■□□□□ 0.27
RAPGEF1-203ENST00000372195 TET2Q6N021 2002 aaPredicted RBP16.76■□□□□ 0.27
RAPGEF1-203ENST00000372195 HCG22E2RYF7 251 aa16.74■□□□□ 0.27
RAPGEF1-203ENST00000372195 PIEZO2Q9H5I5 2752 aa16.74■□□□□ 0.27
RAPGEF1-203ENST00000372195 Q8N2B8 174 aa16.73■□□□□ 0.27
RAPGEF1-203ENST00000372195 C11orf72Q8NBR9 251 aa16.72■□□□□ 0.27
RAPGEF1-203ENST00000372195 SMIM29Q86T20 159 aa16.72■□□□□ 0.27
RAPGEF1-203ENST00000372195 C22orf24Q9Y442 160 aa16.72■□□□□ 0.27
RAPGEF1-203ENST00000372195 SMCPP49901 116 aaPredicted RBP16.71■□□□□ 0.27
RAPGEF1-203ENST00000372195 KIAA0087Q14695 138 aa16.71■□□□□ 0.27
RAPGEF1-203ENST00000372195 C2orf48Q96LS8 159 aa16.69■□□□□ 0.26
RAPGEF1-203ENST00000372195 SMCR5Q8TEV8 140 aa16.69■□□□□ 0.26
RAPGEF1-203ENST00000372195 FAM218AQ96MZ4 157 aa16.65■□□□□ 0.26
RAPGEF1-203ENST00000372195 LINC01546A6NGU7 62 aa16.65■□□□□ 0.26
RAPGEF1-203ENST00000372195 C1orf134Q5TEV5 83 aa16.63■□□□□ 0.25
RAPGEF1-203ENST00000372195 LINC00315P59091 139 aa16.63■□□□□ 0.25
RAPGEF1-203ENST00000372195 SPATA3Q8NHX4 192 aa16.63■□□□□ 0.25
RAPGEF1-203ENST00000372195 ATRXP46100 2492 aa16.62■□□□□ 0.25
RAPGEF1-203ENST00000372195 C4orf26Q17RF5 130 aa16.62■□□□□ 0.25
RAPGEF1-203ENST00000372195 C2CD3Q4AC94 2353 aa16.62■□□□□ 0.25
RAPGEF1-203ENST00000372195 IGLV5-39A0A0G2JS06 123 aa16.61■□□□□ 0.25
RAPGEF1-203ENST00000372195 C1orf64Q8NEQ6 169 aa16.61■□□□□ 0.25
RAPGEF1-203ENST00000372195 GOLGB1Q14789 3259 aaKnown RBP16.59■□□□□ 0.25
RAPGEF1-203ENST00000372195 FHL3Q13643 280 aa16.59■□□□□ 0.25
RAPGEF1-203ENST00000372195 CXCL6P80162 114 aa16.58■□□□□ 0.25
RAPGEF1-203ENST00000372195 FAM19A4Q96LR4 140 aa16.58■□□□□ 0.25
RAPGEF1-203ENST00000372195 LINC01561Q8N1V8 128 aa16.58■□□□□ 0.24
RAPGEF1-203ENST00000372195 WDR87Q6ZQQ6 2873 aa16.57■□□□□ 0.24
RAPGEF1-203ENST00000372195 C6orf48Q9UBA6 75 aa16.57■□□□□ 0.24
RAPGEF1-203ENST00000372195 IGKV2D-30A0A075B6S6 120 aa16.56■□□□□ 0.24
RAPGEF1-203ENST00000372195 IGKV2-30P06310 120 aa16.56■□□□□ 0.24
RAPGEF1-203ENST00000372195 IGHV3OR16-9A0A0B4J2B5 98 aa16.56■□□□□ 0.24
RAPGEF1-203ENST00000372195 NAV2Q8IVL1 2488 aa16.55■□□□□ 0.24
RAPGEF1-203ENST00000372195 F8WDY8 70 aa16.54■□□□□ 0.24
RAPGEF1-203ENST00000372195 ABCA2Q9BZC7 2435 aa16.54■□□□□ 0.24
RAPGEF1-203ENST00000372195 LINC00167Q96N53 147 aa16.53■□□□□ 0.24
RAPGEF1-203ENST00000372195 PTPRBP23467 1997 aa16.53■□□□□ 0.24
RAPGEF1-203ENST00000372195 PRO0461Q9UI25 63 aa16.52■□□□□ 0.24
RAPGEF1-203ENST00000372195 COL27A1Q8IZC6 1860 aaPredicted RBP16.5■□□□□ 0.23
RAPGEF1-203ENST00000372195 CCDC168Q8NDH2 2452 aa16.5■□□□□ 0.23
RAPGEF1-203ENST00000372195 hDV103S1A0JD37 113 aa16.49■□□□□ 0.23
RAPGEF1-203ENST00000372195 MOBPQ13875 183 aa16.48■□□□□ 0.23
RAPGEF1-203ENST00000372195 C7orf65Q6ZTY9 151 aa16.48■□□□□ 0.23
RAPGEF1-203ENST00000372195 IGF2RP11717 2491 aa16.47■□□□□ 0.23
RAPGEF1-203ENST00000372195 MDFIQ99750 246 aa16.46■□□□□ 0.23
RAPGEF1-203ENST00000372195 CACNA1AO00555 2505 aa16.46■□□□□ 0.23
RAPGEF1-203ENST00000372195 SPACA4Q8TDM5 124 aa16.46■□□□□ 0.22
RAPGEF1-203ENST00000372195 CHTF8P0CG12 524 aa16.45■□□□□ 0.22
RAPGEF1-203ENST00000372195 PHF5AQ7RTV0 110 aaKnown RBP16.45■□□□□ 0.22
RAPGEF1-203ENST00000372195 RPL37AP61513 92 aaKnown RBP16.42■□□□□ 0.22
RAPGEF1-203ENST00000372195 ST20-AS1Q8NBB2 130 aa16.42■□□□□ 0.22
RAPGEF1-203ENST00000372195 SPAG11AQ6PDA7 123 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms