RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 COX6A2Q02221 97 aa11.16□□□□□ -0.62
GTF3C4-201ENST00000372146 MUC7Q8TAX7 377 aa11.15□□□□□ -0.62
GTF3C4-201ENST00000372146 BDP1A6H8Y1 2624 aa11.15□□□□□ -0.62
GTF3C4-201ENST00000372146 K7EQG2 157 aa11.15□□□□□ -0.62
GTF3C4-201ENST00000372146 U3KQA8 63 aa11.15□□□□□ -0.62
GTF3C4-201ENST00000372146 LINC01548A6NM66 108 aa11.15□□□□□ -0.62
GTF3C4-201ENST00000372146 IGLV2-18A0A075B6J9 118 aa11.15□□□□□ -0.62
GTF3C4-201ENST00000372146 TRAV10A0A0B4J240 114 aa11.15□□□□□ -0.63
GTF3C4-201ENST00000372146 Q6ZTC4 211 aa11.15□□□□□ -0.63
GTF3C4-201ENST00000372146 C6orf48Q9UBA6 75 aa11.14□□□□□ -0.63
GTF3C4-201ENST00000372146 TSPEAR-AS2P59090 65 aa11.13□□□□□ -0.63
GTF3C4-201ENST00000372146 CR1P17927 2039 aa11.13□□□□□ -0.63
GTF3C4-201ENST00000372146 DEFB114Q30KQ6 69 aa11.13□□□□□ -0.63
GTF3C4-201ENST00000372146 A0A087WSZ3 146 aa11.13□□□□□ -0.63
GTF3C4-201ENST00000372146 CDC42SE2Q9NRR3 84 aa11.13□□□□□ -0.63
GTF3C4-201ENST00000372146 IGIPA6NJ69 53 aa11.12□□□□□ -0.63
GTF3C4-201ENST00000372146 M0R2N4 97 aa11.12□□□□□ -0.63
GTF3C4-201ENST00000372146 KPRPQ5T749 579 aaPredicted RBP11.12□□□□□ -0.63
GTF3C4-201ENST00000372146 LELP1Q5T871 98 aa11.12□□□□□ -0.63
GTF3C4-201ENST00000372146 A8MTW9 85 aa11.11□□□□□ -0.63
GTF3C4-201ENST00000372146 MUC6Q6W4X9 2439 aa11.11□□□□□ -0.63
GTF3C4-201ENST00000372146 EIF4EBP1Q13541 118 aaPredicted RBP11.1□□□□□ -0.63
GTF3C4-201ENST00000372146 PRR9Q5T870 116 aa11.1□□□□□ -0.63
GTF3C4-201ENST00000372146 FSHBP01225 129 aa11.09□□□□□ -0.63
GTF3C4-201ENST00000372146 UNQ6190/PRO20217Q6UXQ8 127 aa11.09□□□□□ -0.63
GTF3C4-201ENST00000372146 FSTL3O95633 263 aa11.09□□□□□ -0.63
GTF3C4-201ENST00000372146 POLR2KP53803 58 aaKnown RBP11.09□□□□□ -0.63
GTF3C4-201ENST00000372146 SMIM1B2RUZ4 78 aa11.08□□□□□ -0.64
GTF3C4-201ENST00000372146 DAZAP2Q15038 168 aaPredicted RBP11.08□□□□□ -0.64
GTF3C4-201ENST00000372146 NOTCH2Q04721 2471 aa11.08□□□□□ -0.64
GTF3C4-201ENST00000372146 PIEZO2Q9H5I5 2752 aa11.07□□□□□ -0.64
GTF3C4-201ENST00000372146 ZNF702PQ9H963 129 aa11.07□□□□□ -0.64
GTF3C4-201ENST00000372146 LINC00310P59036 64 aa11.07□□□□□ -0.64
GTF3C4-201ENST00000372146 SPTBN4Q9H254 2564 aa11.07□□□□□ -0.64
GTF3C4-201ENST00000372146 EP400Q96L91 3159 aa11.06□□□□□ -0.64
GTF3C4-201ENST00000372146 LINC00482Q8N8I6 264 aa11.06□□□□□ -0.64
GTF3C4-201ENST00000372146 LINC00242Q5T6M2 205 aa11.06□□□□□ -0.64
GTF3C4-201ENST00000372146 CNFNQ9BYD5 112 aa11.06□□□□□ -0.64
GTF3C4-201ENST00000372146 BRWD1-AS2P59051 145 aa11.05□□□□□ -0.64
GTF3C4-201ENST00000372146 CD164Q04900 197 aa11.05□□□□□ -0.64
GTF3C4-201ENST00000372146 NCOR2Q9Y618 2525 aa11.05□□□□□ -0.64
GTF3C4-201ENST00000372146 ODF3BA8MYP8 253 aa11.05□□□□□ -0.64
GTF3C4-201ENST00000372146 J3QKU1 62 aa11.05□□□□□ -0.64
GTF3C4-201ENST00000372146 LTBP2Q14767 1821 aa11.04□□□□□ -0.64
GTF3C4-201ENST00000372146 SETD2Q9BYW2 2564 aaPredicted RBP11.03□□□□□ -0.64
GTF3C4-201ENST00000372146 TP53AIP1Q9HCN2 124 aa11.03□□□□□ -0.64
GTF3C4-201ENST00000372146 KLLNB2CW77 178 aa11.03□□□□□ -0.64
GTF3C4-201ENST00000372146 C11orf21Q9P2W6 132 aa11.03□□□□□ -0.64
GTF3C4-201ENST00000372146 ZNF580Q9UK33 172 aa11.03□□□□□ -0.64
GTF3C4-201ENST00000372146 C1orf229Q6ZS94 237 aaPredicted RBP11.02□□□□□ -0.65
GTF3C4-201ENST00000372146 C6orf223Q8N319 242 aa11.02□□□□□ -0.65
GTF3C4-201ENST00000372146 Q6ZPA2 131 aa11.01□□□□□ -0.65
GTF3C4-201ENST00000372146 ZFHX2Q9C0A1 2572 aaPredicted RBP11.01□□□□□ -0.65
GTF3C4-201ENST00000372146 COL4A3Q01955 1670 aa11.01□□□□□ -0.65
GTF3C4-201ENST00000372146 EDN2P20800 178 aa11□□□□□ -0.65
GTF3C4-201ENST00000372146 LINC01561Q8N1V8 128 aa11□□□□□ -0.65
GTF3C4-201ENST00000372146 LINC00574Q9H8X3 128 aa10.99□□□□□ -0.65
GTF3C4-201ENST00000372146 EGFEM1PQ0D2K5 195 aa10.99□□□□□ -0.65
GTF3C4-201ENST00000372146 FAM19A4Q96LR4 140 aa10.99□□□□□ -0.65
GTF3C4-201ENST00000372146 LINC01556Q5JQF7 62 aa10.99□□□□□ -0.65
GTF3C4-201ENST00000372146 URB1-AS1Q96HZ7 61 aa10.98□□□□□ -0.65
GTF3C4-201ENST00000372146 GOLGB1Q14789 3259 aaKnown RBP10.98□□□□□ -0.65
GTF3C4-201ENST00000372146 PLA2G2CQ5R387 149 aa10.98□□□□□ -0.65
GTF3C4-201ENST00000372146 KTN1-AS1Q86SY8 53 aa10.97□□□□□ -0.65
GTF3C4-201ENST00000372146 CHCHD7Q9BUK0 85 aa10.96□□□□□ -0.65
GTF3C4-201ENST00000372146 MTORP42345 2549 aa10.96□□□□□ -0.66
GTF3C4-201ENST00000372146 LINC00337Q8N6G1 96 aa10.96□□□□□ -0.66
GTF3C4-201ENST00000372146 C2orf48Q96LS8 159 aa10.96□□□□□ -0.66
GTF3C4-201ENST00000372146 TM2D3Q9BRN9 247 aa10.96□□□□□ -0.66
GTF3C4-201ENST00000372146 ADORA2A-AS1P86434 159 aa10.95□□□□□ -0.66
GTF3C4-201ENST00000372146 Q6YL49 198 aa10.94□□□□□ -0.66
GTF3C4-201ENST00000372146 CRIPTQ9P021 101 aa10.94□□□□□ -0.66
GTF3C4-201ENST00000372146 SPATA3Q8NHX4 192 aa10.93□□□□□ -0.66
GTF3C4-201ENST00000372146 FHL2Q14192 279 aa10.93□□□□□ -0.66
GTF3C4-201ENST00000372146 C10orf99Q6UWK7 81 aa10.93□□□□□ -0.66
GTF3C4-201ENST00000372146 AMELXQ99217 191 aa10.92□□□□□ -0.66
GTF3C4-201ENST00000372146 F8WDY8 70 aa10.92□□□□□ -0.66
GTF3C4-201ENST00000372146 LY6G6CO95867 125 aa10.92□□□□□ -0.66
GTF3C4-201ENST00000372146 MRGPRG-AS1Q2M3A8 158 aa10.92□□□□□ -0.66
GTF3C4-201ENST00000372146 IGLV4-60A0A075B6I1 120 aa10.92□□□□□ -0.66
GTF3C4-201ENST00000372146 IGLV5-52A0A0A0MRZ9 124 aa10.9□□□□□ -0.66
GTF3C4-201ENST00000372146 KIAA0087Q14695 138 aa10.89□□□□□ -0.67
GTF3C4-201ENST00000372146 LINC01600Q96MT4 127 aa10.89□□□□□ -0.67
GTF3C4-201ENST00000372146 TRAV22A0A0B4J277 110 aa10.89□□□□□ -0.67
GTF3C4-201ENST00000372146 PIP4P1Q86T03 277 aa10.89□□□□□ -0.67
GTF3C4-201ENST00000372146 BCE1O60756 84 aa10.89□□□□□ -0.67
GTF3C4-201ENST00000372146 CYP4F30PQ9H0H9 118 aa10.88□□□□□ -0.67
GTF3C4-201ENST00000372146 C18orf65Q6ZTR6 163 aa10.88□□□□□ -0.67
GTF3C4-201ENST00000372146 A8MUN3 132 aa10.88□□□□□ -0.67
GTF3C4-201ENST00000372146 IGFL2Q6UWQ7 119 aa10.87□□□□□ -0.67
GTF3C4-201ENST00000372146 COL4A4P53420 1690 aaPredicted RBP10.85□□□□□ -0.67
GTF3C4-201ENST00000372146 H3BPC8 53 aa10.85□□□□□ -0.67
GTF3C4-201ENST00000372146 SMCPP49901 116 aaPredicted RBP10.85□□□□□ -0.67
GTF3C4-201ENST00000372146 ANKRD17O75179 2603 aaKnown RBP10.85□□□□□ -0.67
GTF3C4-201ENST00000372146 COA5Q86WW8 74 aa10.85□□□□□ -0.67
GTF3C4-201ENST00000372146 PSMG3-AS1Q96PY0 264 aa10.85□□□□□ -0.67
GTF3C4-201ENST00000372146 NUPR2A6NF83 97 aa10.85□□□□□ -0.67
GTF3C4-201ENST00000372146 UQCR11O14957 56 aa10.84□□□□□ -0.67
GTF3C4-201ENST00000372146 LINC00336Q6ZUF6 198 aa10.84□□□□□ -0.67
GTF3C4-201ENST00000372146 APLNQ9ULZ1 77 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 1193.1 ms