RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 CFC1P0CG37 223 aa8.41□□□□□ -1.06
USF1-203ENST00000368021 TIMM21Q9BVV7 248 aa8.41□□□□□ -1.06
USF1-203ENST00000368021 MALP21145 153 aa8.4□□□□□ -1.06
USF1-203ENST00000368021 UBE2D4Q9Y2X8 147 aa8.4□□□□□ -1.06
USF1-203ENST00000368021 CSMD3Q7Z407 3707 aa8.4□□□□□ -1.06
USF1-203ENST00000368021 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.4□□□□□ -1.07
USF1-203ENST00000368021 TRBV6-8A0A0A6YYG3 113 aa8.4□□□□□ -1.07
USF1-203ENST00000368021 FAM236AA0A1B0GUQ0 79 aa8.4□□□□□ -1.07
USF1-203ENST00000368021 FAM236BA0A1B0GV22 79 aa8.4□□□□□ -1.07
USF1-203ENST00000368021 IGKV2-29A2NJV5 120 aaPredicted RBP8.4□□□□□ -1.07
USF1-203ENST00000368021 H7C423 109 aa8.4□□□□□ -1.07
USF1-203ENST00000368021 C11orf45Q8TAV5 145 aa8.4□□□□□ -1.07
USF1-203ENST00000368021 STARD9Q9P2P6 4700 aa8.39□□□□□ -1.07
USF1-203ENST00000368021 IGLV4-3A0A075B6K6 122 aa8.39□□□□□ -1.07
USF1-203ENST00000368021 H3BNG1 76 aa8.39□□□□□ -1.07
USF1-203ENST00000368021 COPS9Q8WXC6 57 aa8.39□□□□□ -1.07
USF1-203ENST00000368021 CHCHD5Q9BSY4 110 aa8.39□□□□□ -1.07
USF1-203ENST00000368021 TMEM243Q9BU79 118 aa8.39□□□□□ -1.07
USF1-203ENST00000368021 A0A0J9YY99 117 aa8.38□□□□□ -1.07
USF1-203ENST00000368021 HTN3P15516 51 aa8.38□□□□□ -1.07
USF1-203ENST00000368021 MRPS36P82909 103 aaKnown RBP8.38□□□□□ -1.07
USF1-203ENST00000368021 Q6ZTC4 211 aa8.38□□□□□ -1.07
USF1-203ENST00000368021 TTTY13Q9BZ97 58 aa8.38□□□□□ -1.07
USF1-203ENST00000368021 IGHV3-30P01768 117 aa8.38□□□□□ -1.07
USF1-203ENST00000368021 IGHV3-30-5P0DP03 117 aa8.38□□□□□ -1.07
USF1-203ENST00000368021 C2orf82Q6UX34 121 aa8.38□□□□□ -1.07
USF1-203ENST00000368021 FAM104AQ969W3 186 aa8.38□□□□□ -1.07
USF1-203ENST00000368021 AMELXQ99217 191 aa8.38□□□□□ -1.07
USF1-203ENST00000368021 KMT2CQ8NEZ4 4911 aaKnown RBP8.38□□□□□ -1.07
USF1-203ENST00000368021 ICOSQ9Y6W8 199 aa8.37□□□□□ -1.07
USF1-203ENST00000368021 UBE2L6O14933 153 aa8.36□□□□□ -1.07
USF1-203ENST00000368021 IGHV3-33P01772 117 aa8.36□□□□□ -1.07
USF1-203ENST00000368021 CEMP1Q6PRD7 247 aaPredicted RBP8.36□□□□□ -1.07
USF1-203ENST00000368021 OPRPNQ99935 248 aaPredicted RBP8.36□□□□□ -1.07
USF1-203ENST00000368021 NANOS2P60321 138 aaKnown RBP8.36□□□□□ -1.07
USF1-203ENST00000368021 DGAT2L7PQ6IED9 249 aa8.36□□□□□ -1.07
USF1-203ENST00000368021 A0A096LPF7 62 aa8.35□□□□□ -1.07
USF1-203ENST00000368021 C5orf38Q86SI9 138 aa8.35□□□□□ -1.07
USF1-203ENST00000368021 MUC7Q8TAX7 377 aa8.35□□□□□ -1.07
USF1-203ENST00000368021 TENM2Q9NT68 2774 aa8.35□□□□□ -1.07
USF1-203ENST00000368021 IGLV4-69A0A075B6H9 119 aa8.34□□□□□ -1.07
USF1-203ENST00000368021 DEFB131BA0A096LNP1 70 aa8.34□□□□□ -1.07
USF1-203ENST00000368021 C11orf86A6NJI1 115 aa8.34□□□□□ -1.07
USF1-203ENST00000368021 DPH3Q96FX2 82 aa8.34□□□□□ -1.07
USF1-203ENST00000368021 SDIM1Q6ZPB5 146 aa8.33□□□□□ -1.08
USF1-203ENST00000368021 LOC107984640A0A0U1RRK4 108 aa8.33□□□□□ -1.08
USF1-203ENST00000368021 NDUFC2O95298 119 aa8.33□□□□□ -1.08
USF1-203ENST00000368021 TIRAPP58753 221 aa8.33□□□□□ -1.08
USF1-203ENST00000368021 HIST1H4AP62805 103 aaKnown RBP8.33□□□□□ -1.08
USF1-203ENST00000368021 CDC42SE2Q9NRR3 84 aa8.33□□□□□ -1.08
USF1-203ENST00000368021 TRAV10A0A0B4J240 114 aa8.32□□□□□ -1.08
USF1-203ENST00000368021 A0A1B0GUV1 79 aa8.32□□□□□ -1.08
USF1-203ENST00000368021 INAFM2P0DMQ5 153 aa8.32□□□□□ -1.08
USF1-203ENST00000368021 DAND5Q8N907 189 aa8.32□□□□□ -1.08
USF1-203ENST00000368021 PLECQ15149 4684 aaKnown RBP8.32□□□□□ -1.08
USF1-203ENST00000368021 TEX49A0A1B0GTD5 131 aa8.31□□□□□ -1.08
USF1-203ENST00000368021 Q1RN00 199 aa8.31□□□□□ -1.08
USF1-203ENST00000368021 LELP1Q5T871 98 aa8.31□□□□□ -1.08
USF1-203ENST00000368021 LGALS3P17931 250 aaKnown RBP8.31□□□□□ -1.08
USF1-203ENST00000368021 RNASE13Q5GAN3 156 aaKnown RBP8.31□□□□□ -1.08
USF1-203ENST00000368021 CASC10Q5T4H9 136 aa8.31□□□□□ -1.08
USF1-203ENST00000368021 PLEKHB2Q96CS7 222 aa8.31□□□□□ -1.08
USF1-203ENST00000368021 TRAV13-1A0A0B4J241 112 aa8.3□□□□□ -1.08
USF1-203ENST00000368021 SERP2Q8N6R1 65 aa8.3□□□□□ -1.08
USF1-203ENST00000368021 A0A0J9YXV3 536 aa8.29□□□□□ -1.08
USF1-203ENST00000368021 TINCRA0A1B0GVN0 87 aa8.29□□□□□ -1.08
USF1-203ENST00000368021 C3orf84H3BNL1 204 aa8.29□□□□□ -1.08
USF1-203ENST00000368021 LYPD5Q6UWN5 251 aa8.29□□□□□ -1.08
USF1-203ENST00000368021 FAM19A3Q7Z5A8 133 aa8.29□□□□□ -1.08
USF1-203ENST00000368021 LYSTQ99698 3801 aa8.29□□□□□ -1.08
USF1-203ENST00000368021 IGLV4-60A0A075B6I1 120 aa8.28□□□□□ -1.08
USF1-203ENST00000368021 LST1O00453 97 aa8.28□□□□□ -1.08
USF1-203ENST00000368021 RPL18AQ02543 176 aaKnown RBP8.28□□□□□ -1.08
USF1-203ENST00000368021 ZNF22P17026 224 aaPredicted RBP8.27□□□□□ -1.09
USF1-203ENST00000368021 C2orf48Q96LS8 159 aa8.27□□□□□ -1.09
USF1-203ENST00000368021 V9GYY9 64 aa8.27□□□□□ -1.09
USF1-203ENST00000368021 IGLV5-45A0A087WSX0 123 aa8.26□□□□□ -1.09
USF1-203ENST00000368021 LEPROTO15243 131 aa8.26□□□□□ -1.09
USF1-203ENST00000368021 BCE1O60756 84 aa8.26□□□□□ -1.09
USF1-203ENST00000368021 RYR3Q15413 4870 aa8.26□□□□□ -1.09
USF1-203ENST00000368021 LINC00242Q5T6M2 205 aa8.26□□□□□ -1.09
USF1-203ENST00000368021 TMEM223A0PJW6 202 aa8.25□□□□□ -1.09
USF1-203ENST00000368021 J3QQQ9 107 aa8.25□□□□□ -1.09
USF1-203ENST00000368021 SACSQ9NZJ4 4579 aa8.25□□□□□ -1.09
USF1-203ENST00000368021 SEC61GP60059 68 aa8.24□□□□□ -1.09
USF1-203ENST00000368021 NPC2P61916 151 aa8.24□□□□□ -1.09
USF1-203ENST00000368021 SFTA2Q6UW10 78 aa8.24□□□□□ -1.09
USF1-203ENST00000368021 Q5XG85 94 aa8.24□□□□□ -1.09
USF1-203ENST00000368021 SERP1Q9Y6X1 66 aa8.24□□□□□ -1.09
USF1-203ENST00000368021 ESRGQ1W209 222 aa8.23□□□□□ -1.09
USF1-203ENST00000368021 A0A0J9YXY3 114 aa8.22□□□□□ -1.09
USF1-203ENST00000368021 S100A7L2Q5SY68 101 aa8.22□□□□□ -1.09
USF1-203ENST00000368021 CDKN2A-AS1Q9UH64 79 aa8.22□□□□□ -1.09
USF1-203ENST00000368021 LAMTOR3Q9UHA4 124 aa8.22□□□□□ -1.09
USF1-203ENST00000368021 DYNC2H1Q8NCM8 4307 aaKnown RBP8.22□□□□□ -1.09
USF1-203ENST00000368021 HYDINQ4G0P3 5121 aa8.22□□□□□ -1.09
USF1-203ENST00000368021 LINC00959A0A1B0GUT2 108 aa8.22□□□□□ -1.09
USF1-203ENST00000368021 TRIAP1O43715 76 aa8.22□□□□□ -1.09
USF1-203ENST00000368021 ATP5EP56381 51 aaPredicted RBP8.22□□□□□ -1.09
USF1-203ENST00000368021 COX6A2Q02221 97 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms