RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 URB1-AS1Q96HZ7 61 aa14.93□□□□□ -0.02
PFDN2-201ENST00000368010 YPEL4Q96NS1 127 aa14.93□□□□□ -0.02
PFDN2-201ENST00000368010 TINCRA0A1B0GVN0 87 aa14.92□□□□□ -0.02
PFDN2-201ENST00000368010 C6orf226Q5I0X4 101 aa14.92□□□□□ -0.02
PFDN2-201ENST00000368010 LRP1Q07954 4544 aaKnown RBP14.91□□□□□ -0.02
PFDN2-201ENST00000368010 A0A096LNJ9 63 aa14.9□□□□□ -0.02
PFDN2-201ENST00000368010 HBDP02042 147 aa14.9□□□□□ -0.02
PFDN2-201ENST00000368010 RAB5BP61020 215 aa14.9□□□□□ -0.02
PFDN2-201ENST00000368010 GAGE2EQ4V326 116 aa14.9□□□□□ -0.02
PFDN2-201ENST00000368010 GAGE2DQ9UEU5 116 aa14.9□□□□□ -0.02
PFDN2-201ENST00000368010 NDUFC2-KCTD14E9PQ53 114 aa14.89□□□□□ -0.03
PFDN2-201ENST00000368010 FAT3Q8TDW7 4589 aa14.88□□□□□ -0.03
PFDN2-201ENST00000368010 IGLV5-45A0A087WSX0 123 aa14.88□□□□□ -0.03
PFDN2-201ENST00000368010 SMIM1B2RUZ4 78 aa14.87□□□□□ -0.03
PFDN2-201ENST00000368010 CBLN2Q8IUK8 224 aa14.87□□□□□ -0.03
PFDN2-201ENST00000368010 PMCHL1Q16048 86 aa14.86□□□□□ -0.03
PFDN2-201ENST00000368010 CXCL5P42830 114 aa14.85□□□□□ -0.03
PFDN2-201ENST00000368010 NDUFA6P56556 154 aa14.85□□□□□ -0.03
PFDN2-201ENST00000368010 PDZD11Q5EBL8 140 aa14.85□□□□□ -0.03
PFDN2-201ENST00000368010 PHF5AQ7RTV0 110 aaKnown RBP14.85□□□□□ -0.03
PFDN2-201ENST00000368010 FAM168BA1KXE4 195 aa14.84□□□□□ -0.03
PFDN2-201ENST00000368010 F8VRH5 84 aa14.84□□□□□ -0.03
PFDN2-201ENST00000368010 SLC7A5P1Q8MH63 180 aa14.84□□□□□ -0.03
PFDN2-201ENST00000368010 H3BRM9 83 aa14.82□□□□□ -0.04
PFDN2-201ENST00000368010 ATP5LO75964 103 aa14.82□□□□□ -0.04
PFDN2-201ENST00000368010 FAM19A5Q7Z5A7 132 aaPredicted RBP14.82□□□□□ -0.04
PFDN2-201ENST00000368010 COX7B2Q8TF08 81 aa14.82□□□□□ -0.04
PFDN2-201ENST00000368010 SPINK8P0C7L1 97 aa14.81□□□□□ -0.04
PFDN2-201ENST00000368010 IGLC3P0DOY3 106 aa14.81□□□□□ -0.04
PFDN2-201ENST00000368010 LCE2DQ5TA82 110 aaPredicted RBP14.8□□□□□ -0.04
PFDN2-201ENST00000368010 CHCHD1Q96BP2 118 aaKnown RBP14.8□□□□□ -0.04
PFDN2-201ENST00000368010 C9orf129Q5T035 196 aaKnown RBP14.79□□□□□ -0.04
PFDN2-201ENST00000368010 SPINK6Q6UWN8 80 aa14.79□□□□□ -0.04
PFDN2-201ENST00000368010 PSORS1C2Q9UIG4 136 aa14.79□□□□□ -0.04
PFDN2-201ENST00000368010 M0QXV9 152 aa14.76□□□□□ -0.05
PFDN2-201ENST00000368010 BAGE3Q86Y29 109 aa14.76□□□□□ -0.05
PFDN2-201ENST00000368010 ZNF22P17026 224 aaPredicted RBP14.75□□□□□ -0.05
PFDN2-201ENST00000368010 KRTAP7-1Q8IUC3 87 aa14.75□□□□□ -0.05
PFDN2-201ENST00000368010 SRSF9Q13242 221 aaKnown RBP eCLIP14.74□□□□□ -0.05
PFDN2-201ENST00000368010 C1orf137Q5JT78 98 aa14.74□□□□□ -0.05
PFDN2-201ENST00000368010 XAGE1AQ9HD64 81 aa14.74□□□□□ -0.05
PFDN2-201ENST00000368010 TRGC2P03986 189 aa14.73□□□□□ -0.05
PFDN2-201ENST00000368010 HSBP1O75506 76 aa14.72□□□□□ -0.05
PFDN2-201ENST00000368010 IGLV5-39A0A0G2JS06 123 aa14.71□□□□□ -0.05
PFDN2-201ENST00000368010 MT1HL1P0DM35 61 aa14.71□□□□□ -0.05
PFDN2-201ENST00000368010 UBE2BP63146 152 aa14.71□□□□□ -0.05
PFDN2-201ENST00000368010 REG3GQ6UW15 175 aa14.71□□□□□ -0.05
PFDN2-201ENST00000368010 C11orf86A6NJI1 115 aa14.7□□□□□ -0.06
PFDN2-201ENST00000368010 CHTOPQ9Y3Y2 248 aaKnown RBP14.7□□□□□ -0.06
PFDN2-201ENST00000368010 TMEM170BQ5T4T1 132 aa14.69□□□□□ -0.06
PFDN2-201ENST00000368010 SERTAD4-AS1Q5TG53 156 aa14.69□□□□□ -0.06
PFDN2-201ENST00000368010 KRTAP11-1Q8IUC1 163 aa14.69□□□□□ -0.06
PFDN2-201ENST00000368010 IFI27L1Q96BM0 104 aa14.69□□□□□ -0.06
PFDN2-201ENST00000368010 LINC01600Q96MT4 127 aa14.67□□□□□ -0.06
PFDN2-201ENST00000368010 TRAV12-1A0A0B4J245 112 aa14.66□□□□□ -0.06
PFDN2-201ENST00000368010 IGLV7-43P04211 117 aa14.66□□□□□ -0.06
PFDN2-201ENST00000368010 FAM19A2Q8N3H0 131 aa14.66□□□□□ -0.06
PFDN2-201ENST00000368010 C22orf24Q9Y442 160 aa14.65□□□□□ -0.06
PFDN2-201ENST00000368010 COLCA2A8K830 154 aa14.64□□□□□ -0.07
PFDN2-201ENST00000368010 LBHQ53QV2 105 aaPredicted RBP14.64□□□□□ -0.07
PFDN2-201ENST00000368010 SERF1AO75920 110 aa14.62□□□□□ -0.07
PFDN2-201ENST00000368010 ODF1Q14990 250 aa14.62□□□□□ -0.07
PFDN2-201ENST00000368010 SFTA2Q6UW10 78 aa14.61□□□□□ -0.07
PFDN2-201ENST00000368010 TP73-AS1Q9UF72 201 aa14.61□□□□□ -0.07
PFDN2-201ENST00000368010 PFN2P35080 140 aa14.6□□□□□ -0.07
PFDN2-201ENST00000368010 MRPL55Q7Z7F7 128 aaKnown RBP14.6□□□□□ -0.07
PFDN2-201ENST00000368010 DIRC1Q969H9 104 aa14.6□□□□□ -0.07
PFDN2-201ENST00000368010 LINC00310P59036 64 aa14.59□□□□□ -0.07
PFDN2-201ENST00000368010 ERG28Q9UKR5 140 aa14.59□□□□□ -0.07
PFDN2-201ENST00000368010 PLA2G2DQ9UNK4 145 aa14.59□□□□□ -0.07
PFDN2-201ENST00000368010 TMEM223A0PJW6 202 aa14.58□□□□□ -0.08
PFDN2-201ENST00000368010 LEPROTL1O95214 131 aa14.58□□□□□ -0.08
PFDN2-201ENST00000368010 COX17Q14061 63 aa14.56□□□□□ -0.08
PFDN2-201ENST00000368010 ZNF625Q96I27 306 aaPredicted RBP14.56□□□□□ -0.08
PFDN2-201ENST00000368010 H0Y8G0 127 aa14.55□□□□□ -0.08
PFDN2-201ENST00000368010 NUPR1O60356 82 aa14.55□□□□□ -0.08
PFDN2-201ENST00000368010 H0Y9J4 135 aa14.54□□□□□ -0.08
PFDN2-201ENST00000368010 TNXBP22105 4242 aa14.54□□□□□ -0.08
PFDN2-201ENST00000368010 HMCN2Q8NDA2 5059 aa14.53□□□□□ -0.08
PFDN2-201ENST00000368010 IGLV5-37A0A075B6J1 123 aa14.53□□□□□ -0.08
PFDN2-201ENST00000368010 KRTAP10-8P60410 259 aa14.53□□□□□ -0.08
PFDN2-201ENST00000368010 NKAPP1Q8N9T2 125 aa14.53□□□□□ -0.08
PFDN2-201ENST00000368010 HSPB8Q9UJY1 196 aa14.53□□□□□ -0.08
PFDN2-201ENST00000368010 SND1-IT1Q9HBX3 110 aa14.52□□□□□ -0.09
PFDN2-201ENST00000368010 SCO1O75880 301 aa14.51□□□□□ -0.09
PFDN2-201ENST00000368010 LINC00167Q96N53 147 aa14.51□□□□□ -0.09
PFDN2-201ENST00000368010 GAGE10A6NGK3 116 aa14.5□□□□□ -0.09
PFDN2-201ENST00000368010 FABP4P15090 132 aa14.49□□□□□ -0.09
PFDN2-201ENST00000368010 RPL37AP8A6NKH3 93 aa14.48□□□□□ -0.09
PFDN2-201ENST00000368010 ZNF861PO60384 105 aa14.47□□□□□ -0.09
PFDN2-201ENST00000368010 BCE1O60756 84 aa14.46□□□□□ -0.09
PFDN2-201ENST00000368010 PLNP26678 52 aa14.46□□□□□ -0.09
PFDN2-201ENST00000368010 LINC00158P58513 81 aa14.46□□□□□ -0.09
PFDN2-201ENST00000368010 RPL24P83731 157 aaKnown RBP14.46□□□□□ -0.09
PFDN2-201ENST00000368010 VPREB1P12018 145 aa14.45□□□□□ -0.1
PFDN2-201ENST00000368010 A0A0U1RRA0 63 aa14.43□□□□□ -0.1
PFDN2-201ENST00000368010 HIST1H2BKO60814 126 aa14.43□□□□□ -0.1
PFDN2-201ENST00000368010 HIST1H2BJP06899 126 aa14.43□□□□□ -0.1
PFDN2-201ENST00000368010 HIST1H2BOP23527 126 aa14.43□□□□□ -0.1
PFDN2-201ENST00000368010 HIST1H2BBP33778 126 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms