RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 Q6ZSN1 163 aa10.56□□□□□ -0.72
LMX1B-201ENST00000355497 IGKV2D-30A0A075B6S6 120 aa10.55□□□□□ -0.72
LMX1B-201ENST00000355497 IGKV2-30P06310 120 aa10.55□□□□□ -0.72
LMX1B-201ENST00000355497 LYPD5Q6UWN5 251 aa10.55□□□□□ -0.72
LMX1B-201ENST00000355497 COX8CQ7Z4L0 72 aa10.55□□□□□ -0.72
LMX1B-201ENST00000355497 C1orf134Q5TEV5 83 aa10.54□□□□□ -0.72
LMX1B-201ENST00000355497 PRO0628Q9UI54 55 aa10.54□□□□□ -0.72
LMX1B-201ENST00000355497 VPREB1P12018 145 aa10.53□□□□□ -0.72
LMX1B-201ENST00000355497 A8MTW9 85 aa10.53□□□□□ -0.72
LMX1B-201ENST00000355497 SMR3AQ99954 134 aa10.53□□□□□ -0.72
LMX1B-201ENST00000355497 C16orf95Q9H693 158 aa10.53□□□□□ -0.72
LMX1B-201ENST00000355497 Q6ZRU5 148 aa10.52□□□□□ -0.72
LMX1B-201ENST00000355497 FREM1Q5H8C1 2179 aa10.52□□□□□ -0.73
LMX1B-201ENST00000355497 Q8N2B8 174 aa10.52□□□□□ -0.73
LMX1B-201ENST00000355497 A0A096LNJ9 63 aa10.52□□□□□ -0.73
LMX1B-201ENST00000355497 SPINT4Q6UDR6 99 aa10.52□□□□□ -0.73
LMX1B-201ENST00000355497 SMIM29Q86T20 159 aa10.51□□□□□ -0.73
LMX1B-201ENST00000355497 SMCR5Q8TEV8 140 aa10.51□□□□□ -0.73
LMX1B-201ENST00000355497 LTBP2Q14767 1821 aa10.51□□□□□ -0.73
LMX1B-201ENST00000355497 CDSNQ15517 529 aa10.5□□□□□ -0.73
LMX1B-201ENST00000355497 MED12LQ86YW9 2145 aa10.49□□□□□ -0.73
LMX1B-201ENST00000355497 ACYP2P14621 99 aa10.49□□□□□ -0.73
LMX1B-201ENST00000355497 LINC00337Q8N6G1 96 aa10.49□□□□□ -0.73
LMX1B-201ENST00000355497 C22orf24Q9Y442 160 aa10.49□□□□□ -0.73
LMX1B-201ENST00000355497 DSCAMO60469 2012 aa10.48□□□□□ -0.73
LMX1B-201ENST00000355497 FAM208BQ5VWN6 2430 aa10.46□□□□□ -0.73
LMX1B-201ENST00000355497 KIAA0087Q14695 138 aa10.46□□□□□ -0.73
LMX1B-201ENST00000355497 TANC2Q9HCD6 1990 aa10.46□□□□□ -0.74
LMX1B-201ENST00000355497 TP53AIP1Q9HCN2 124 aa10.45□□□□□ -0.74
LMX1B-201ENST00000355497 SPATA3Q8NHX4 192 aa10.45□□□□□ -0.74
LMX1B-201ENST00000355497 CDIP1Q9H305 208 aa10.44□□□□□ -0.74
LMX1B-201ENST00000355497 C6orf48Q9UBA6 75 aa10.43□□□□□ -0.74
LMX1B-201ENST00000355497 KRTAP10-9P60411 292 aa10.43□□□□□ -0.74
LMX1B-201ENST00000355497 ATG2AQ2TAZ0 1938 aa10.43□□□□□ -0.74
LMX1B-201ENST00000355497 COL4A4P53420 1690 aaPredicted RBP10.43□□□□□ -0.74
LMX1B-201ENST00000355497 C8orf87E5RJ46 101 aa10.42□□□□□ -0.74
LMX1B-201ENST00000355497 ZFHX2Q9C0A1 2572 aaPredicted RBP10.41□□□□□ -0.74
LMX1B-201ENST00000355497 PTPRQQ9UMZ3 2332 aa10.41□□□□□ -0.74
LMX1B-201ENST00000355497 TECTAO75443 2155 aa10.4□□□□□ -0.74
LMX1B-201ENST00000355497 IGLV5-39A0A0G2JS06 123 aa10.4□□□□□ -0.74
LMX1B-201ENST00000355497 C4orf26Q17RF5 130 aa10.39□□□□□ -0.75
LMX1B-201ENST00000355497 ATP11AUNQ6ZP68 121 aa10.39□□□□□ -0.75
LMX1B-201ENST00000355497 PRR14LQ5THK1 2151 aa10.39□□□□□ -0.75
LMX1B-201ENST00000355497 HCFC1P51610 2035 aa10.39□□□□□ -0.75
LMX1B-201ENST00000355497 BCE1O60756 84 aa10.38□□□□□ -0.75
LMX1B-201ENST00000355497 LINC01546A6NGU7 62 aa10.38□□□□□ -0.75
LMX1B-201ENST00000355497 SPACA4Q8TDM5 124 aa10.38□□□□□ -0.75
LMX1B-201ENST00000355497 MOBPQ13875 183 aa10.37□□□□□ -0.75
LMX1B-201ENST00000355497 KIF25-AS1Q9Y6Z4 181 aa10.36□□□□□ -0.75
LMX1B-201ENST00000355497 LINC00167Q96N53 147 aa10.35□□□□□ -0.75
LMX1B-201ENST00000355497 FHL3Q13643 280 aa10.35□□□□□ -0.75
LMX1B-201ENST00000355497 NHLRC4P0CG21 123 aaPredicted RBP10.35□□□□□ -0.75
LMX1B-201ENST00000355497 C11orf72Q8NBR9 251 aa10.34□□□□□ -0.75
LMX1B-201ENST00000355497 PRO3102Q9H379 93 aa10.34□□□□□ -0.75
LMX1B-201ENST00000355497 A0A1B0GW54 56 aa10.34□□□□□ -0.75
LMX1B-201ENST00000355497 ANKHD1Q8IWZ3 2542 aaKnown RBP10.34□□□□□ -0.75
LMX1B-201ENST00000355497 ARHGAP32A7KAX9 2087 aa10.34□□□□□ -0.75
LMX1B-201ENST00000355497 IGLV8-61A0A075B6I0 122 aa10.34□□□□□ -0.75
LMX1B-201ENST00000355497 SORL1Q92673 2214 aa10.33□□□□□ -0.76
LMX1B-201ENST00000355497 H3BPC8 53 aa10.33□□□□□ -0.76
LMX1B-201ENST00000355497 PCNX3Q9H6A9 2034 aa10.33□□□□□ -0.76
LMX1B-201ENST00000355497 EML5Q05BV3 1969 aa10.33□□□□□ -0.76
LMX1B-201ENST00000355497 WNK1Q9H4A3 2382 aa10.33□□□□□ -0.76
LMX1B-201ENST00000355497 ELOF1P60002 83 aaKnown RBP10.32□□□□□ -0.76
LMX1B-201ENST00000355497 PCDH15Q96QU1 1955 aa10.32□□□□□ -0.76
LMX1B-201ENST00000355497 IGHV3OR16-9A0A0B4J2B5 98 aa10.32□□□□□ -0.76
LMX1B-201ENST00000355497 PLXNB1O43157 2135 aa10.31□□□□□ -0.76
LMX1B-201ENST00000355497 MUC22E2RYF6 1773 aaPredicted RBP10.3□□□□□ -0.76
LMX1B-201ENST00000355497 SSBP3-AS1Q7Z2R9 100 aa10.3□□□□□ -0.76
LMX1B-201ENST00000355497 MDFIQ99750 246 aa10.3□□□□□ -0.76
LMX1B-201ENST00000355497 Q6ZQT0 140 aa10.29□□□□□ -0.76
LMX1B-201ENST00000355497 PRRC2AP48634 2157 aaKnown RBP10.29□□□□□ -0.76
LMX1B-201ENST00000355497 FAM218AQ96MZ4 157 aa10.28□□□□□ -0.76
LMX1B-201ENST00000355497 MUC6Q6W4X9 2439 aa10.28□□□□□ -0.76
LMX1B-201ENST00000355497 A0A1W2PPR1 153 aa10.28□□□□□ -0.76
LMX1B-201ENST00000355497 LOC110117498A0A087WWA1 95 aa10.28□□□□□ -0.76
LMX1B-201ENST00000355497 RPS28P62857 69 aaKnown RBP10.28□□□□□ -0.76
LMX1B-201ENST00000355497 RAI1Q7Z5J4 1906 aaPredicted RBP10.28□□□□□ -0.76
LMX1B-201ENST00000355497 SMCPP49901 116 aaPredicted RBP10.27□□□□□ -0.76
LMX1B-201ENST00000355497 LINC00313P59037 77 aa10.27□□□□□ -0.76
LMX1B-201ENST00000355497 Q8NBF4 154 aa10.27□□□□□ -0.77
LMX1B-201ENST00000355497 LINC00476Q8WZB0 136 aa10.27□□□□□ -0.77
LMX1B-201ENST00000355497 CEP192Q8TEP8 1941 aa10.25□□□□□ -0.77
LMX1B-201ENST00000355497 IGLV5-45A0A087WSX0 123 aa10.25□□□□□ -0.77
LMX1B-201ENST00000355497 TRAV22A0A0B4J277 110 aa10.25□□□□□ -0.77
LMX1B-201ENST00000355497 Q6ZRX8 168 aa10.25□□□□□ -0.77
LMX1B-201ENST00000355497 FAM19A4Q96LR4 140 aa10.24□□□□□ -0.77
LMX1B-201ENST00000355497 LINC00315P59091 139 aa10.24□□□□□ -0.77
LMX1B-201ENST00000355497 PHF5AQ7RTV0 110 aaKnown RBP10.23□□□□□ -0.77
LMX1B-201ENST00000355497 EXPH5Q8NEV8 1989 aa10.21□□□□□ -0.77
LMX1B-201ENST00000355497 EPM2AB3EWF7 344 aa10.21□□□□□ -0.78
LMX1B-201ENST00000355497 PRO0461Q9UI25 63 aa10.21□□□□□ -0.78
LMX1B-201ENST00000355497 H3BNG1 76 aa10.2□□□□□ -0.78
LMX1B-201ENST00000355497 LRP4O75096 1905 aa10.2□□□□□ -0.78
LMX1B-201ENST00000355497 RPL37AP61513 92 aaKnown RBP10.2□□□□□ -0.78
LMX1B-201ENST00000355497 TM2D3Q9BRN9 247 aa10.2□□□□□ -0.78
LMX1B-201ENST00000355497 OTOGLQ3ZCN5 2332 aa10.19□□□□□ -0.78
LMX1B-201ENST00000355497 TYMSOSQ8TAI1 123 aa10.19□□□□□ -0.78
LMX1B-201ENST00000355497 C10orf142B7Z368 130 aa10.19□□□□□ -0.78
LMX1B-201ENST00000355497 CSPG4Q6UVK1 2322 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms