RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 UNQ6190/PRO20217Q6UXQ8 127 aa9.81□□□□□ -0.84
TNFRSF12A-202ENST00000341627 TRBV30A0A0K0K1B3 111 aa9.8□□□□□ -0.84
TNFRSF12A-202ENST00000341627 SMIM1B2RUZ4 78 aa9.8□□□□□ -0.84
TNFRSF12A-202ENST00000341627 PTTG1IPP53801 180 aa9.8□□□□□ -0.84
TNFRSF12A-202ENST00000341627 LINC00310P59036 64 aa9.8□□□□□ -0.84
TNFRSF12A-202ENST00000341627 GAGE2BQ13066 116 aa9.8□□□□□ -0.84
TNFRSF12A-202ENST00000341627 C10orf25Q5T742 122 aa9.8□□□□□ -0.84
TNFRSF12A-202ENST00000341627 C2orf82Q6UX34 121 aa9.8□□□□□ -0.84
TNFRSF12A-202ENST00000341627 C6orf48Q9UBA6 75 aa9.8□□□□□ -0.84
TNFRSF12A-202ENST00000341627 CHTOPQ9Y3Y2 248 aaKnown RBP9.8□□□□□ -0.84
TNFRSF12A-202ENST00000341627 TRAV12-1A0A0B4J245 112 aa9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 HIST1H2BKO60814 126 aa9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 ATP6V1G1O75348 118 aa9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 LEPROTL1O95214 131 aa9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 PLA2G1BP04054 148 aaKnown RBP9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 HIST1H2BJP06899 126 aa9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 HIST1H2BOP23527 126 aa9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 HIST1H2BBP33778 126 aa9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 CXCL5P42830 114 aa9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 HIST1H2BDP58876 126 aa9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 HIST1H2BCP62807 126 aa9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 RPL18AQ02543 176 aaKnown RBP9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 HIST2H2BEQ16778 126 aa9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 HIST1H2BHQ93079 126 aa9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 HIST1H2BNQ99877 126 aa9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 HIST1H2BMQ99879 126 aa9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 PLAC8Q9NZF1 115 aa9.79□□□□□ -0.84
TNFRSF12A-202ENST00000341627 SPINK8P0C7L1 97 aa9.78□□□□□ -0.84
TNFRSF12A-202ENST00000341627 STPG4Q8N801 248 aa9.78□□□□□ -0.84
TNFRSF12A-202ENST00000341627 HSPB8Q9UJY1 196 aa9.78□□□□□ -0.84
TNFRSF12A-202ENST00000341627 TLX1NBP0CAT3 122 aa9.77□□□□□ -0.85
TNFRSF12A-202ENST00000341627 ZNF22P17026 224 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF12A-202ENST00000341627 COX7B2Q8TF08 81 aa9.77□□□□□ -0.85
TNFRSF12A-202ENST00000341627 C11orf86A6NJI1 115 aa9.76□□□□□ -0.85
TNFRSF12A-202ENST00000341627 F8VRH5 84 aa9.76□□□□□ -0.85
TNFRSF12A-202ENST00000341627 NUPR1O60356 82 aa9.76□□□□□ -0.85
TNFRSF12A-202ENST00000341627 TMEM170BQ5T4T1 132 aa9.76□□□□□ -0.85
TNFRSF12A-202ENST00000341627 FLG2Q5D862 2391 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF12A-202ENST00000341627 NDUFC2-KCTD14E9PQ53 114 aa9.74□□□□□ -0.85
TNFRSF12A-202ENST00000341627 FABP4P15090 132 aa9.74□□□□□ -0.85
TNFRSF12A-202ENST00000341627 IGLV5-39A0A0G2JS06 123 aa9.73□□□□□ -0.85
TNFRSF12A-202ENST00000341627 H0Y8G0 127 aa9.73□□□□□ -0.85
TNFRSF12A-202ENST00000341627 Q6ZRP5 223 aa9.73□□□□□ -0.85
TNFRSF12A-202ENST00000341627 C7orf33Q8WU49 177 aa9.73□□□□□ -0.85
TNFRSF12A-202ENST00000341627 RPL37AP61513 92 aaKnown RBP9.72□□□□□ -0.85
TNFRSF12A-202ENST00000341627 GAGE2EQ4V326 116 aa9.72□□□□□ -0.85
TNFRSF12A-202ENST00000341627 C9orf116Q5BN46 136 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF12A-202ENST00000341627 GAGE2DQ9UEU5 116 aa9.72□□□□□ -0.85
TNFRSF12A-202ENST00000341627 DMBT1Q9UGM3 2413 aaPredicted RBP9.71□□□□□ -0.85
TNFRSF12A-202ENST00000341627 KRTAP10-4P60372 401 aaPredicted RBP9.71□□□□□ -0.86
TNFRSF12A-202ENST00000341627 ODF1Q14990 250 aa9.71□□□□□ -0.86
TNFRSF12A-202ENST00000341627 MAP1LC3CQ9BXW4 147 aa9.71□□□□□ -0.86
TNFRSF12A-202ENST00000341627 TMEM223A0PJW6 202 aa9.69□□□□□ -0.86
TNFRSF12A-202ENST00000341627 PLNP26678 52 aa9.69□□□□□ -0.86
TNFRSF12A-202ENST00000341627 COA6Q5JTJ3 125 aaKnown RBP9.69□□□□□ -0.86
TNFRSF12A-202ENST00000341627 SFTA2Q6UW10 78 aa9.69□□□□□ -0.86
TNFRSF12A-202ENST00000341627 A0A1W2PNN7 141 aa9.68□□□□□ -0.86
TNFRSF12A-202ENST00000341627 DPM2O94777 84 aa9.66□□□□□ -0.86
TNFRSF12A-202ENST00000341627 LRP1Q07954 4544 aaKnown RBP9.64□□□□□ -0.87
TNFRSF12A-202ENST00000341627 FAM168BA1KXE4 195 aa9.64□□□□□ -0.87
TNFRSF12A-202ENST00000341627 SYS1-DBNDD2H3BUS1 97 aa9.64□□□□□ -0.87
TNFRSF12A-202ENST00000341627 IGKCP01834 107 aa9.64□□□□□ -0.87
TNFRSF12A-202ENST00000341627 C9orf129Q5T035 196 aaKnown RBP9.64□□□□□ -0.87
TNFRSF12A-202ENST00000341627 FAM19A5Q7Z5A7 132 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF12A-202ENST00000341627 XAGE1AQ9HD64 81 aa9.64□□□□□ -0.87
TNFRSF12A-202ENST00000341627 HERVK_113P61574 105 aa9.63□□□□□ -0.87
TNFRSF12A-202ENST00000341627 PMCHL2Q9BQD1 86 aa9.63□□□□□ -0.87
TNFRSF12A-202ENST00000341627 COX17Q14061 63 aa9.62□□□□□ -0.87
TNFRSF12A-202ENST00000341627 PHF5AQ7RTV0 110 aaKnown RBP9.62□□□□□ -0.87
TNFRSF12A-202ENST00000341627 ZNF625Q96I27 306 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF12A-202ENST00000341627 ERG28Q9UKR5 140 aa9.62□□□□□ -0.87
TNFRSF12A-202ENST00000341627 PFN2P35080 140 aa9.61□□□□□ -0.87
TNFRSF12A-202ENST00000341627 PET117Q6UWS5 81 aa9.61□□□□□ -0.87
TNFRSF12A-202ENST00000341627 FAT3Q8TDW7 4589 aa9.6□□□□□ -0.87
TNFRSF12A-202ENST00000341627 M0QXV9 152 aa9.6□□□□□ -0.87
TNFRSF12A-202ENST00000341627 PRR3P79522 188 aaKnown RBP9.6□□□□□ -0.87
TNFRSF12A-202ENST00000341627 PLEKHB2Q96CS7 222 aa9.6□□□□□ -0.87
TNFRSF12A-202ENST00000341627 LEPROTO15243 131 aa9.59□□□□□ -0.87
TNFRSF12A-202ENST00000341627 PKHD1L1Q86WI1 4243 aa9.58□□□□□ -0.88
TNFRSF12A-202ENST00000341627 MYMXA0A1B0GTQ4 84 aa9.58□□□□□ -0.88
TNFRSF12A-202ENST00000341627 KRTAP29-1A8MX34 341 aaPredicted RBP9.58□□□□□ -0.88
TNFRSF12A-202ENST00000341627 HERV-K104P63124 156 aa9.58□□□□□ -0.88
TNFRSF12A-202ENST00000341627 LINC01545Q5VT33 79 aa9.58□□□□□ -0.88
TNFRSF12A-202ENST00000341627 KRTAP7-1Q8IUC3 87 aa9.58□□□□□ -0.88
TNFRSF12A-202ENST00000341627 NDUFA12Q9UI09 145 aa9.58□□□□□ -0.88
TNFRSF12A-202ENST00000341627 LINC00587B1AMM8 73 aa9.57□□□□□ -0.88
TNFRSF12A-202ENST00000341627 C3orf79P0CE67 100 aa9.57□□□□□ -0.88
TNFRSF12A-202ENST00000341627 HNRNPA3P51991 378 aaKnown RBP9.57□□□□□ -0.88
TNFRSF12A-202ENST00000341627 KRTDAPP60985 99 aa9.57□□□□□ -0.88
TNFRSF12A-202ENST00000341627 LBHQ53QV2 105 aaPredicted RBP9.57□□□□□ -0.88
TNFRSF12A-202ENST00000341627 SERTAD4-AS1Q5TG53 156 aa9.57□□□□□ -0.88
TNFRSF12A-202ENST00000341627 J3QQQ9 107 aa9.56□□□□□ -0.88
TNFRSF12A-202ENST00000341627 S100A6P06703 90 aa9.56□□□□□ -0.88
TNFRSF12A-202ENST00000341627 LGALS3P17931 250 aaKnown RBP9.56□□□□□ -0.88
TNFRSF12A-202ENST00000341627 LINC00158P58513 81 aa9.56□□□□□ -0.88
TNFRSF12A-202ENST00000341627 UBE2BP63146 152 aa9.56□□□□□ -0.88
TNFRSF12A-202ENST00000341627 MEIG1Q5JSS6 88 aa9.56□□□□□ -0.88
TNFRSF12A-202ENST00000341627 PLA2G2DQ9UNK4 145 aa9.56□□□□□ -0.88
TNFRSF12A-202ENST00000341627 C22orf24Q9Y442 160 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms