RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 PKD1L2Q7Z442 2459 aa11.44□□□□□ -0.58
USP42-201ENST00000306177 SPEGQ15772 3267 aa11.43□□□□□ -0.58
USP42-201ENST00000306177 A0A0U1RQV1 116 aa11.43□□□□□ -0.58
USP42-201ENST00000306177 K7ERS5 55 aa11.43□□□□□ -0.58
USP42-201ENST00000306177 UNQ6190/PRO20217Q6UXQ8 127 aa11.43□□□□□ -0.58
USP42-201ENST00000306177 IMUPQ9GZP8 106 aa11.43□□□□□ -0.58
USP42-201ENST00000306177 USP17L23D6RBM5 183 aa11.43□□□□□ -0.58
USP42-201ENST00000306177 LINC00694P0DN24 101 aa11.43□□□□□ -0.58
USP42-201ENST00000306177 EGFEM1PQ0D2K5 195 aa11.43□□□□□ -0.58
USP42-201ENST00000306177 C3orf22Q8N5N4 141 aa11.43□□□□□ -0.58
USP42-201ENST00000306177 MPLKIPQ8TAP9 179 aa11.43□□□□□ -0.58
USP42-201ENST00000306177 AMELXQ99217 191 aa11.43□□□□□ -0.58
USP42-201ENST00000306177 RETNQ9HD89 108 aa11.43□□□□□ -0.58
USP42-201ENST00000306177 LINC00474Q9P2X8 69 aa11.43□□□□□ -0.58
USP42-201ENST00000306177 IGLV4-60A0A075B6I1 120 aa11.42□□□□□ -0.58
USP42-201ENST00000306177 WFDC10BQ8IUB3 73 aa11.42□□□□□ -0.58
USP42-201ENST00000306177 COX6A2Q02221 97 aa11.42□□□□□ -0.58
USP42-201ENST00000306177 V9GYY9 64 aa11.42□□□□□ -0.58
USP42-201ENST00000306177 POLQO75417 2590 aa11.41□□□□□ -0.58
USP42-201ENST00000306177 FAM236DA0A1B0GTK5 79 aa11.4□□□□□ -0.58
USP42-201ENST00000306177 FAM236CP0DP71 79 aa11.4□□□□□ -0.58
USP42-201ENST00000306177 TSPEAR-AS2P59090 65 aa11.4□□□□□ -0.58
USP42-201ENST00000306177 A0A096LNJ9 63 aa11.4□□□□□ -0.58
USP42-201ENST00000306177 LY6G6CO95867 125 aa11.39□□□□□ -0.59
USP42-201ENST00000306177 PLAC8L1A1L4L8 177 aa11.38□□□□□ -0.59
USP42-201ENST00000306177 CASC2Q6XLA1 102 aa11.38□□□□□ -0.59
USP42-201ENST00000306177 Q6ZTC4 211 aa11.38□□□□□ -0.59
USP42-201ENST00000306177 Q6ZSN1 163 aa11.38□□□□□ -0.59
USP42-201ENST00000306177 C9orf116Q5BN46 136 aaPredicted RBP11.37□□□□□ -0.59
USP42-201ENST00000306177 CHD7Q9P2D1 2997 aa11.37□□□□□ -0.59
USP42-201ENST00000306177 RPL28P46779 137 aaKnown RBP11.37□□□□□ -0.59
USP42-201ENST00000306177 NUPR2A6NF83 97 aa11.37□□□□□ -0.59
USP42-201ENST00000306177 SERP2Q8N6R1 65 aa11.36□□□□□ -0.59
USP42-201ENST00000306177 TRBV10-3A0A0K0K1G6 114 aa11.35□□□□□ -0.59
USP42-201ENST00000306177 NTM-AS1Q6ZSK4 140 aa11.35□□□□□ -0.59
USP42-201ENST00000306177 A0A1B0GUV1 79 aa11.34□□□□□ -0.59
USP42-201ENST00000306177 SPINK6Q6UWN8 80 aa11.34□□□□□ -0.59
USP42-201ENST00000306177 FAM19A3Q7Z5A8 133 aa11.34□□□□□ -0.59
USP42-201ENST00000306177 EYSQ5T1H1 3165 aa11.34□□□□□ -0.59
USP42-201ENST00000306177 ADAMTSL4-AS1Q5T5F5 129 aa11.34□□□□□ -0.59
USP42-201ENST00000306177 NDUFC2-KCTD14E9PQ53 114 aa11.34□□□□□ -0.59
USP42-201ENST00000306177 M0QXV9 152 aa11.34□□□□□ -0.59
USP42-201ENST00000306177 WFDC13Q8IUB5 93 aa11.34□□□□□ -0.59
USP42-201ENST00000306177 Q8N814 137 aa11.34□□□□□ -0.59
USP42-201ENST00000306177 XGP55808 180 aa11.33□□□□□ -0.6
USP42-201ENST00000306177 MYO15AQ9UKN7 3530 aa11.33□□□□□ -0.6
USP42-201ENST00000306177 EPG5Q9HCE0 2579 aa11.33□□□□□ -0.6
USP42-201ENST00000306177 TRIOO75962 3097 aa11.33□□□□□ -0.6
USP42-201ENST00000306177 Q6JHZ5 121 aa11.33□□□□□ -0.6
USP42-201ENST00000306177 HRCT1Q6UXD1 115 aa11.32□□□□□ -0.6
USP42-201ENST00000306177 Q8N2B8 174 aa11.32□□□□□ -0.6
USP42-201ENST00000306177 IGLV9-49A0A0B4J1Y8 123 aa11.32□□□□□ -0.6
USP42-201ENST00000306177 NDUFC1O43677 76 aa11.32□□□□□ -0.6
USP42-201ENST00000306177 C6orf223Q8N319 242 aa11.31□□□□□ -0.6
USP42-201ENST00000306177 BPTFQ12830 3046 aa11.31□□□□□ -0.6
USP42-201ENST00000306177 KIF25-AS1Q9Y6Z4 181 aa11.3□□□□□ -0.6
USP42-201ENST00000306177 ACANP16112 2415 aa11.3□□□□□ -0.6
USP42-201ENST00000306177 PRR3P79522 188 aaKnown RBP11.3□□□□□ -0.6
USP42-201ENST00000306177 TET2Q6N021 2002 aaPredicted RBP11.3□□□□□ -0.6
USP42-201ENST00000306177 F8WDY8 70 aa11.29□□□□□ -0.6
USP42-201ENST00000306177 C10orf25Q5T742 122 aa11.29□□□□□ -0.6
USP42-201ENST00000306177 LYPD5Q6UWN5 251 aa11.29□□□□□ -0.6
USP42-201ENST00000306177 ATP5EP56381 51 aaPredicted RBP11.28□□□□□ -0.6
USP42-201ENST00000306177 REG3GQ6UW15 175 aa11.28□□□□□ -0.6
USP42-201ENST00000306177 PRR15LQ9BU68 103 aa11.28□□□□□ -0.6
USP42-201ENST00000306177 A0A087WYN8 130 aa11.28□□□□□ -0.6
USP42-201ENST00000306177 ANKRD17O75179 2603 aaKnown RBP11.28□□□□□ -0.6
USP42-201ENST00000306177 LINC01561Q8N1V8 128 aa11.28□□□□□ -0.6
USP42-201ENST00000306177 COX7CP15954 63 aa11.27□□□□□ -0.61
USP42-201ENST00000306177 SNURFQ9Y675 71 aa11.27□□□□□ -0.61
USP42-201ENST00000306177 C2orf48Q96LS8 159 aa11.27□□□□□ -0.61
USP42-201ENST00000306177 C11orf72Q8NBR9 251 aa11.26□□□□□ -0.61
USP42-201ENST00000306177 AGRNO00468 2067 aa11.25□□□□□ -0.61
USP42-201ENST00000306177 C1orf137Q5JT78 98 aa11.25□□□□□ -0.61
USP42-201ENST00000306177 Q6Q795 121 aa11.25□□□□□ -0.61
USP42-201ENST00000306177 A6NED7 52 aa11.24□□□□□ -0.61
USP42-201ENST00000306177 FAM19A4Q96LR4 140 aa11.23□□□□□ -0.61
USP42-201ENST00000306177 LINC01546A6NGU7 62 aa11.22□□□□□ -0.61
USP42-201ENST00000306177 CCDC179H3BU77 68 aa11.21□□□□□ -0.61
USP42-201ENST00000306177 PRRC2CQ9Y520 2896 aaKnown RBP11.21□□□□□ -0.62
USP42-201ENST00000306177 FAM30AQ9NZY2 134 aa11.2□□□□□ -0.62
USP42-201ENST00000306177 C1orf195Q5TG92 126 aa11.2□□□□□ -0.62
USP42-201ENST00000306177 IGLV5-52A0A0A0MRZ9 124 aa11.2□□□□□ -0.62
USP42-201ENST00000306177 Q8N9L7 120 aa11.19□□□□□ -0.62
USP42-201ENST00000306177 LINC00315P59091 139 aa11.19□□□□□ -0.62
USP42-201ENST00000306177 PCSK5Q92824 1860 aa11.19□□□□□ -0.62
USP42-201ENST00000306177 PRYO14603 147 aa11.19□□□□□ -0.62
USP42-201ENST00000306177 PTPRBP23467 1997 aa11.17□□□□□ -0.62
USP42-201ENST00000306177 IGLV5-39A0A0G2JS06 123 aa11.17□□□□□ -0.62
USP42-201ENST00000306177 Q6ZRU5 148 aa11.17□□□□□ -0.62
USP42-201ENST00000306177 FHL3Q13643 280 aa11.17□□□□□ -0.62
USP42-201ENST00000306177 CELA1Q9UNI1 258 aa11.17□□□□□ -0.62
USP42-201ENST00000306177 TRAV7A0A075B6U4 112 aa11.16□□□□□ -0.62
USP42-201ENST00000306177 PRR4Q16378 134 aa11.16□□□□□ -0.62
USP42-201ENST00000306177 LINC00575Q6W349 94 aa11.15□□□□□ -0.62
USP42-201ENST00000306177 LINC00337Q8N6G1 96 aa11.15□□□□□ -0.63
USP42-201ENST00000306177 SERP1Q9Y6X1 66 aa11.14□□□□□ -0.63
USP42-201ENST00000306177 Q9BRP9 147 aa11.14□□□□□ -0.63
USP42-201ENST00000306177 A0A087WVE0 104 aa11.14□□□□□ -0.63
USP42-201ENST00000306177 IGHV3OR16-9A0A0B4J2B5 98 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms