RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 Q9BRP9 147 aa10.64□□□□□ -0.71
SCN3B-201ENST00000299333 C2orf16Q68DN1 1984 aa10.64□□□□□ -0.71
SCN3B-201ENST00000299333 SSBP3-AS1Q7Z2R9 100 aa10.64□□□□□ -0.71
SCN3B-201ENST00000299333 FAM19A4Q96LR4 140 aa10.64□□□□□ -0.71
SCN3B-201ENST00000299333 ALPK3Q96L96 1907 aa10.64□□□□□ -0.71
SCN3B-201ENST00000299333 SBSPONQ8IVN8 264 aa10.63□□□□□ -0.71
SCN3B-201ENST00000299333 PRLHP81277 87 aa10.63□□□□□ -0.71
SCN3B-201ENST00000299333 LINC00474Q9P2X8 69 aa10.62□□□□□ -0.71
SCN3B-201ENST00000299333 SMIM29Q86T20 159 aa10.62□□□□□ -0.71
SCN3B-201ENST00000299333 IGLV1-40P01703 118 aa10.62□□□□□ -0.71
SCN3B-201ENST00000299333 C2CD3Q4AC94 2353 aa10.62□□□□□ -0.71
SCN3B-201ENST00000299333 LINC00336Q6ZUF6 198 aa10.61□□□□□ -0.71
SCN3B-201ENST00000299333 LINC00337Q8N6G1 96 aa10.6□□□□□ -0.71
SCN3B-201ENST00000299333 PRRC2AP48634 2157 aaKnown RBP10.6□□□□□ -0.71
SCN3B-201ENST00000299333 INAFM1C9JVW0 142 aa10.59□□□□□ -0.71
SCN3B-201ENST00000299333 HIVEP2P31629 2446 aa10.59□□□□□ -0.71
SCN3B-201ENST00000299333 SPG11Q96JI7 2443 aa10.59□□□□□ -0.71
SCN3B-201ENST00000299333 SMCPP49901 116 aaPredicted RBP10.59□□□□□ -0.71
SCN3B-201ENST00000299333 C11orf71Q6IPW1 123 aa10.58□□□□□ -0.72
SCN3B-201ENST00000299333 PCNX3Q9H6A9 2034 aa10.58□□□□□ -0.72
SCN3B-201ENST00000299333 H3BS24 57 aa10.58□□□□□ -0.72
SCN3B-201ENST00000299333 A8MUN3 132 aa10.58□□□□□ -0.72
SCN3B-201ENST00000299333 KTN1-AS1Q86SY8 53 aa10.57□□□□□ -0.72
SCN3B-201ENST00000299333 NUP210LQ5VU65 1888 aa10.57□□□□□ -0.72
SCN3B-201ENST00000299333 LCA10Q71F78 164 aa10.57□□□□□ -0.72
SCN3B-201ENST00000299333 Q6ZSN1 163 aa10.56□□□□□ -0.72
SCN3B-201ENST00000299333 LINC01006Q8NI28 216 aa10.56□□□□□ -0.72
SCN3B-201ENST00000299333 IGLV8-61A0A075B6I0 122 aa10.56□□□□□ -0.72
SCN3B-201ENST00000299333 FSHBP01225 129 aa10.56□□□□□ -0.72
SCN3B-201ENST00000299333 CSPG4Q6UVK1 2322 aa10.56□□□□□ -0.72
SCN3B-201ENST00000299333 ODF3L2Q3SX64 289 aa10.55□□□□□ -0.72
SCN3B-201ENST00000299333 TECTAO75443 2155 aa10.55□□□□□ -0.72
SCN3B-201ENST00000299333 C7orf65Q6ZTY9 151 aa10.54□□□□□ -0.72
SCN3B-201ENST00000299333 ANKHD1Q8IWZ3 2542 aaKnown RBP10.54□□□□□ -0.72
SCN3B-201ENST00000299333 FHL2Q14192 279 aa10.53□□□□□ -0.72
SCN3B-201ENST00000299333 OTOGLQ3ZCN5 2332 aa10.53□□□□□ -0.72
SCN3B-201ENST00000299333 SPATA3Q8NHX4 192 aa10.52□□□□□ -0.72
SCN3B-201ENST00000299333 COX8CQ7Z4L0 72 aa10.52□□□□□ -0.73
SCN3B-201ENST00000299333 BCE1O60756 84 aa10.51□□□□□ -0.73
SCN3B-201ENST00000299333 SONP18583 2426 aaKnown RBP10.51□□□□□ -0.73
SCN3B-201ENST00000299333 ACYP2P14621 99 aa10.51□□□□□ -0.73
SCN3B-201ENST00000299333 ZFHX2Q9C0A1 2572 aaPredicted RBP10.51□□□□□ -0.73
SCN3B-201ENST00000299333 MUC22E2RYF6 1773 aaPredicted RBP10.51□□□□□ -0.73
SCN3B-201ENST00000299333 PRO0461Q9UI25 63 aa10.51□□□□□ -0.73
SCN3B-201ENST00000299333 EML5Q05BV3 1969 aa10.51□□□□□ -0.73
SCN3B-201ENST00000299333 LINC01556Q5JQF7 62 aa10.5□□□□□ -0.73
SCN3B-201ENST00000299333 Q8N2B8 174 aa10.5□□□□□ -0.73
SCN3B-201ENST00000299333 IGKV2D-30A0A075B6S6 120 aa10.49□□□□□ -0.73
SCN3B-201ENST00000299333 IGKV2-30P06310 120 aa10.49□□□□□ -0.73
SCN3B-201ENST00000299333 LY6G6CO95867 125 aa10.49□□□□□ -0.73
SCN3B-201ENST00000299333 PTPN13Q12923 2485 aa10.49□□□□□ -0.73
SCN3B-201ENST00000299333 Q6ZTC4 211 aa10.49□□□□□ -0.73
SCN3B-201ENST00000299333 KIAA0087Q14695 138 aa10.48□□□□□ -0.73
SCN3B-201ENST00000299333 C2orf48Q96LS8 159 aa10.47□□□□□ -0.73
SCN3B-201ENST00000299333 CYP4F30PQ9H0H9 118 aa10.46□□□□□ -0.73
SCN3B-201ENST00000299333 C6orf48Q9UBA6 75 aa10.46□□□□□ -0.74
SCN3B-201ENST00000299333 FAM218AQ96MZ4 157 aa10.46□□□□□ -0.74
SCN3B-201ENST00000299333 Q6ZRU5 148 aa10.45□□□□□ -0.74
SCN3B-201ENST00000299333 TM2D3Q9BRN9 247 aa10.45□□□□□ -0.74
SCN3B-201ENST00000299333 A0A1B0GUV1 79 aa10.44□□□□□ -0.74
SCN3B-201ENST00000299333 ATG2AQ2TAZ0 1938 aa10.44□□□□□ -0.74
SCN3B-201ENST00000299333 NOTCH2Q04721 2471 aa10.44□□□□□ -0.74
SCN3B-201ENST00000299333 ACACBO00763 2458 aa10.42□□□□□ -0.74
SCN3B-201ENST00000299333 SMCR5Q8TEV8 140 aa10.42□□□□□ -0.74
SCN3B-201ENST00000299333 DSCAMO60469 2012 aa10.42□□□□□ -0.74
SCN3B-201ENST00000299333 IGLV5-39A0A0G2JS06 123 aa10.42□□□□□ -0.74
SCN3B-201ENST00000299333 BRI3O95415 125 aa10.42□□□□□ -0.74
SCN3B-201ENST00000299333 LY6G6DO95868 133 aa10.42□□□□□ -0.74
SCN3B-201ENST00000299333 AVPP01185 164 aa10.42□□□□□ -0.74
SCN3B-201ENST00000299333 C10orf142B7Z368 130 aa10.4□□□□□ -0.74
SCN3B-201ENST00000299333 NAV3Q8IVL0 2385 aa10.4□□□□□ -0.74
SCN3B-201ENST00000299333 LINC01546A6NGU7 62 aa10.4□□□□□ -0.74
SCN3B-201ENST00000299333 C22orf24Q9Y442 160 aa10.39□□□□□ -0.75
SCN3B-201ENST00000299333 IGLV5-52A0A0A0MRZ9 124 aa10.39□□□□□ -0.75
SCN3B-201ENST00000299333 KIF25-AS1Q9Y6Z4 181 aa10.39□□□□□ -0.75
SCN3B-201ENST00000299333 TP53AIP1Q9HCN2 124 aa10.38□□□□□ -0.75
SCN3B-201ENST00000299333 CACNA1AO00555 2505 aa10.38□□□□□ -0.75
SCN3B-201ENST00000299333 AGRNO00468 2067 aa10.38□□□□□ -0.75
SCN3B-201ENST00000299333 DOPEY1Q5JWR5 2465 aa10.38□□□□□ -0.75
SCN3B-201ENST00000299333 IGLV1-51P01701 117 aa10.38□□□□□ -0.75
SCN3B-201ENST00000299333 LYPD5Q6UWN5 251 aa10.38□□□□□ -0.75
SCN3B-201ENST00000299333 Q6ZQT0 140 aa10.37□□□□□ -0.75
SCN3B-201ENST00000299333 NHLRC4P0CG21 123 aaPredicted RBP10.37□□□□□ -0.75
SCN3B-201ENST00000299333 BDP1A6H8Y1 2624 aa10.37□□□□□ -0.75
SCN3B-201ENST00000299333 LINC01600Q96MT4 127 aa10.37□□□□□ -0.75
SCN3B-201ENST00000299333 MUC4Q99102 2169 aa10.35□□□□□ -0.75
SCN3B-201ENST00000299333 NUPR2A6NF83 97 aa10.35□□□□□ -0.75
SCN3B-201ENST00000299333 CRIPTQ9P021 101 aa10.35□□□□□ -0.75
SCN3B-201ENST00000299333 LOC101927531A0A1B0GV80 90 aa10.35□□□□□ -0.75
SCN3B-201ENST00000299333 HIVEP3Q5T1R4 2406 aa10.35□□□□□ -0.75
SCN3B-201ENST00000299333 UQCR11O14957 56 aa10.33□□□□□ -0.76
SCN3B-201ENST00000299333 COA5Q86WW8 74 aa10.33□□□□□ -0.76
SCN3B-201ENST00000299333 IGHV3OR16-9A0A0B4J2B5 98 aa10.33□□□□□ -0.76
SCN3B-201ENST00000299333 H3BPC8 53 aa10.33□□□□□ -0.76
SCN3B-201ENST00000299333 TRAV22A0A0B4J277 110 aa10.32□□□□□ -0.76
SCN3B-201ENST00000299333 C11orf72Q8NBR9 251 aa10.32□□□□□ -0.76
SCN3B-201ENST00000299333 MYO18BQ8IUG5 2567 aa10.32□□□□□ -0.76
SCN3B-201ENST00000299333 WIPF1O43516 503 aa10.31□□□□□ -0.76
SCN3B-201ENST00000299333 CDSNQ15517 529 aa10.31□□□□□ -0.76
SCN3B-201ENST00000299333 LOC110117498A0A087WWA1 95 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms