RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 BBC3Q96PG8 261 aaPredicted RBP12.19□□□□□ -0.46
TRIM9-201ENST00000298355 LINC00208Q96KT6 92 aa12.19□□□□□ -0.46
TRIM9-201ENST00000298355 IGLV5-45A0A087WSX0 123 aa12.19□□□□□ -0.46
TRIM9-201ENST00000298355 IGKV2-28A0A075B6P5 120 aa12.18□□□□□ -0.46
TRIM9-201ENST00000298355 IGKV2D-28P01615 120 aa12.18□□□□□ -0.46
TRIM9-201ENST00000298355 HIGD2AQ9BW72 106 aa12.18□□□□□ -0.46
TRIM9-201ENST00000298355 CYSRT1A8MQ03 144 aa12.18□□□□□ -0.46
TRIM9-201ENST00000298355 WFDC10AQ9H1F0 79 aa12.18□□□□□ -0.46
TRIM9-201ENST00000298355 UNQ6190/PRO20217Q6UXQ8 127 aa12.18□□□□□ -0.46
TRIM9-201ENST00000298355 PLAC8L1A1L4L8 177 aa12.17□□□□□ -0.46
TRIM9-201ENST00000298355 Q6YL49 198 aa12.16□□□□□ -0.46
TRIM9-201ENST00000298355 LINC01561Q8N1V8 128 aa12.15□□□□□ -0.46
TRIM9-201ENST00000298355 BRI3O95415 125 aa12.14□□□□□ -0.47
TRIM9-201ENST00000298355 LINC00336Q6ZUF6 198 aa12.14□□□□□ -0.47
TRIM9-201ENST00000298355 TRAV10A0A0B4J240 114 aa12.13□□□□□ -0.47
TRIM9-201ENST00000298355 A8MTW9 85 aa12.13□□□□□ -0.47
TRIM9-201ENST00000298355 SYCNQ0VAF6 134 aa12.13□□□□□ -0.47
TRIM9-201ENST00000298355 Q8N9L7 120 aa12.13□□□□□ -0.47
TRIM9-201ENST00000298355 C19orf84I3L1E1 186 aa12.12□□□□□ -0.47
TRIM9-201ENST00000298355 C18orf65Q6ZTR6 163 aa12.11□□□□□ -0.47
TRIM9-201ENST00000298355 WIPF1O43516 503 aa12.11□□□□□ -0.47
TRIM9-201ENST00000298355 C1orf137Q5JT78 98 aa12.11□□□□□ -0.47
TRIM9-201ENST00000298355 PTPN13Q12923 2485 aa12.11□□□□□ -0.47
TRIM9-201ENST00000298355 DNAH12Q6ZR08 3092 aa12.11□□□□□ -0.47
TRIM9-201ENST00000298355 SPATA3Q8NHX4 192 aa12.1□□□□□ -0.47
TRIM9-201ENST00000298355 ZNF702PQ9H963 129 aa12.1□□□□□ -0.47
TRIM9-201ENST00000298355 A0A096LNI7 61 aa12.1□□□□□ -0.47
TRIM9-201ENST00000298355 TM2D3Q9BRN9 247 aa12.09□□□□□ -0.47
TRIM9-201ENST00000298355 Q6ZQT0 140 aa12.08□□□□□ -0.48
TRIM9-201ENST00000298355 ODF3L2Q3SX64 289 aa12.07□□□□□ -0.48
TRIM9-201ENST00000298355 UTRNP46939 3433 aa12.07□□□□□ -0.48
TRIM9-201ENST00000298355 C11orf45Q8TAV5 145 aa12.07□□□□□ -0.48
TRIM9-201ENST00000298355 ZNF706Q9Y5V0 76 aaPredicted RBP12.07□□□□□ -0.48
TRIM9-201ENST00000298355 LIMD2Q9BT23 127 aa12.06□□□□□ -0.48
TRIM9-201ENST00000298355 LELP1Q5T871 98 aa12.06□□□□□ -0.48
TRIM9-201ENST00000298355 F8WDY8 70 aa12.06□□□□□ -0.48
TRIM9-201ENST00000298355 COL4A2P08572 1712 aa12.05□□□□□ -0.48
TRIM9-201ENST00000298355 IGHV3OR16-9A0A0B4J2B5 98 aa12.05□□□□□ -0.48
TRIM9-201ENST00000298355 LINC00482Q8N8I6 264 aa12.05□□□□□ -0.48
TRIM9-201ENST00000298355 NAV2Q8IVL1 2488 aa12.05□□□□□ -0.48
TRIM9-201ENST00000298355 IGKV2-24A0A0C4DH68 120 aa12.04□□□□□ -0.48
TRIM9-201ENST00000298355 LINC00474Q9P2X8 69 aa12.04□□□□□ -0.48
TRIM9-201ENST00000298355 LOC110117498A0A087WWA1 95 aa12.04□□□□□ -0.48
TRIM9-201ENST00000298355 DNAJC9-AS1A6NH13 148 aa12.04□□□□□ -0.48
TRIM9-201ENST00000298355 C7orf33Q8WU49 177 aa12.04□□□□□ -0.48
TRIM9-201ENST00000298355 RPL37AP8A6NKH3 93 aa12.04□□□□□ -0.48
TRIM9-201ENST00000298355 SMIM29Q86T20 159 aa12.04□□□□□ -0.48
TRIM9-201ENST00000298355 LINC01006Q8NI28 216 aa12.03□□□□□ -0.48
TRIM9-201ENST00000298355 hDV103S1A0JD37 113 aa12.03□□□□□ -0.48
TRIM9-201ENST00000298355 HIVEP2P31629 2446 aa12.03□□□□□ -0.48
TRIM9-201ENST00000298355 EGFEM1PQ0D2K5 195 aa12.02□□□□□ -0.48
TRIM9-201ENST00000298355 C10orf25Q5T742 122 aa12.02□□□□□ -0.48
TRIM9-201ENST00000298355 CEP295Q9C0D2 2601 aa12.02□□□□□ -0.49
TRIM9-201ENST00000298355 A0A1B0GUV1 79 aa12.02□□□□□ -0.49
TRIM9-201ENST00000298355 EIF4EBP3O60516 100 aaPredicted RBP12.02□□□□□ -0.49
TRIM9-201ENST00000298355 Q9UF83 564 aa12.02□□□□□ -0.49
TRIM9-201ENST00000298355 C11orf72Q8NBR9 251 aa12.01□□□□□ -0.49
TRIM9-201ENST00000298355 CCDC168Q8NDH2 2452 aa12.01□□□□□ -0.49
TRIM9-201ENST00000298355 C2orf48Q96LS8 159 aa12□□□□□ -0.49
TRIM9-201ENST00000298355 HCG22E2RYF7 251 aa12□□□□□ -0.49
TRIM9-201ENST00000298355 C6orf223Q8N319 242 aa12□□□□□ -0.49
TRIM9-201ENST00000298355 KLKP1Q107X0 134 aa12□□□□□ -0.49
TRIM9-201ENST00000298355 H0Y9P7 68 aa12□□□□□ -0.49
TRIM9-201ENST00000298355 CEP350Q5VT06 3117 aa12□□□□□ -0.49
TRIM9-201ENST00000298355 H7BZZ5 65 aa11.97□□□□□ -0.49
TRIM9-201ENST00000298355 LINC01600Q96MT4 127 aa11.97□□□□□ -0.49
TRIM9-201ENST00000298355 KPRPQ5T749 579 aaPredicted RBP11.96□□□□□ -0.49
TRIM9-201ENST00000298355 IGHV4-31P0DP07 118 aa11.96□□□□□ -0.5
TRIM9-201ENST00000298355 CDSNQ15517 529 aa11.95□□□□□ -0.5
TRIM9-201ENST00000298355 SONP18583 2426 aaKnown RBP11.95□□□□□ -0.5
TRIM9-201ENST00000298355 ERC2-IT1O76042 136 aa11.94□□□□□ -0.5
TRIM9-201ENST00000298355 AVPP01185 164 aa11.94□□□□□ -0.5
TRIM9-201ENST00000298355 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.94□□□□□ -0.5
TRIM9-201ENST00000298355 ANKRD11Q6UB99 2663 aaPredicted RBP11.93□□□□□ -0.5
TRIM9-201ENST00000298355 BPTFQ12830 3046 aa11.93□□□□□ -0.5
TRIM9-201ENST00000298355 PCOTHQ58A44 107 aa11.93□□□□□ -0.5
TRIM9-201ENST00000298355 DEFB131BA0A096LNP1 70 aa11.92□□□□□ -0.5
TRIM9-201ENST00000298355 MYO9AB2RTY4 2548 aa11.91□□□□□ -0.5
TRIM9-201ENST00000298355 DEFB116Q30KQ4 102 aa11.9□□□□□ -0.5
TRIM9-201ENST00000298355 HIVEP3Q5T1R4 2406 aa11.9□□□□□ -0.5
TRIM9-201ENST00000298355 A0A087WSZ3 146 aa11.88□□□□□ -0.51
TRIM9-201ENST00000298355 C1orf64Q8NEQ6 169 aa11.87□□□□□ -0.51
TRIM9-201ENST00000298355 CD164Q04900 197 aa11.86□□□□□ -0.51
TRIM9-201ENST00000298355 IGHV4-30-4P0DP06 118 aa11.86□□□□□ -0.51
TRIM9-201ENST00000298355 MYO18BQ8IUG5 2567 aa11.86□□□□□ -0.51
TRIM9-201ENST00000298355 KIAA0087Q14695 138 aa11.86□□□□□ -0.51
TRIM9-201ENST00000298355 KLK9Q2XQG4 91 aa11.85□□□□□ -0.51
TRIM9-201ENST00000298355 LY6G6DO95868 133 aa11.84□□□□□ -0.51
TRIM9-201ENST00000298355 A8MUN3 132 aa11.84□□□□□ -0.51
TRIM9-201ENST00000298355 A0A1B0GW54 56 aa11.83□□□□□ -0.52
TRIM9-201ENST00000298355 ELOF1P60002 83 aaKnown RBP11.82□□□□□ -0.52
TRIM9-201ENST00000298355 PLA2G2AP14555 144 aa11.82□□□□□ -0.52
TRIM9-201ENST00000298355 C9orf129Q5T035 196 aaKnown RBP11.82□□□□□ -0.52
TRIM9-201ENST00000298355 A0A1W2PPR1 153 aa11.81□□□□□ -0.52
TRIM9-201ENST00000298355 REG3GQ6UW15 175 aa11.8□□□□□ -0.52
TRIM9-201ENST00000298355 ABCA2Q9BZC7 2435 aa11.8□□□□□ -0.52
TRIM9-201ENST00000298355 SPINK6Q6UWN8 80 aa11.78□□□□□ -0.52
TRIM9-201ENST00000298355 IGLV1-51P01701 117 aa11.78□□□□□ -0.52
TRIM9-201ENST00000298355 Q6ZRU5 148 aa11.78□□□□□ -0.52
TRIM9-201ENST00000298355 SPTBN4Q9H254 2564 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms