RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 MIR7-3HGQ8N6C7 128 aa13.24□□□□□ -0.29
BRAF-201ENST00000288602 C9JAW5 83 aa13.24□□□□□ -0.29
BRAF-201ENST00000288602 MRPL23Q16540 153 aaKnown RBP13.24□□□□□ -0.29
BRAF-201ENST00000288602 CARD19Q96LW7 228 aa13.24□□□□□ -0.29
BRAF-201ENST00000288602 BAHCC1Q9P281 2608 aa13.24□□□□□ -0.29
BRAF-201ENST00000288602 NOTCH1P46531 2555 aa13.24□□□□□ -0.29
BRAF-201ENST00000288602 PFN2P35080 140 aa13.23□□□□□ -0.29
BRAF-201ENST00000288602 LINC00158P58513 81 aa13.22□□□□□ -0.29
BRAF-201ENST00000288602 C6orf226Q5I0X4 101 aa13.22□□□□□ -0.29
BRAF-201ENST00000288602 CLEC2BQ92478 149 aa13.22□□□□□ -0.29
BRAF-201ENST00000288602 XGP55808 180 aa13.22□□□□□ -0.29
BRAF-201ENST00000288602 REG3AQ06141 175 aa13.22□□□□□ -0.29
BRAF-201ENST00000288602 PPDPFLQ8WWR9 84 aa13.22□□□□□ -0.29
BRAF-201ENST00000288602 EGFEM1PQ0D2K5 195 aa13.21□□□□□ -0.29
BRAF-201ENST00000288602 C2orf82Q6UX34 121 aa13.21□□□□□ -0.29
BRAF-201ENST00000288602 SHISA2Q6UWI4 295 aa13.21□□□□□ -0.29
BRAF-201ENST00000288602 TEN1Q86WV5 123 aa13.2□□□□□ -0.3
BRAF-201ENST00000288602 SLC25A20O43772 301 aa13.2□□□□□ -0.3
BRAF-201ENST00000288602 ATXN8Q156A1 80 aa13.2□□□□□ -0.3
BRAF-201ENST00000288602 CHCHD10Q8WYQ3 142 aaPredicted RBP13.2□□□□□ -0.3
BRAF-201ENST00000288602 DNAH3Q8TD57 4116 aa13.18□□□□□ -0.3
BRAF-201ENST00000288602 LINC01620Q4KN68 170 aa13.18□□□□□ -0.3
BRAF-201ENST00000288602 Q6ZTC4 211 aa13.18□□□□□ -0.3
BRAF-201ENST00000288602 COPS9Q8WXC6 57 aa13.18□□□□□ -0.3
BRAF-201ENST00000288602 LELP1Q5T871 98 aa13.17□□□□□ -0.3
BRAF-201ENST00000288602 ANKRD29Q8N6D5 301 aa13.17□□□□□ -0.3
BRAF-201ENST00000288602 PRB2P02812 416 aaPredicted RBP13.17□□□□□ -0.3
BRAF-201ENST00000288602 COX6CP09669 75 aa13.17□□□□□ -0.3
BRAF-201ENST00000288602 CD164L2Q6UWJ8 174 aa13.16□□□□□ -0.3
BRAF-201ENST00000288602 LYPD5Q6UWN5 251 aa13.16□□□□□ -0.3
BRAF-201ENST00000288602 SND1-IT1Q9HBX3 110 aa13.15□□□□□ -0.3
BRAF-201ENST00000288602 KLK12Q9UKR0 248 aa13.15□□□□□ -0.3
BRAF-201ENST00000288602 COX7A2LO14548 114 aa13.15□□□□□ -0.3
BRAF-201ENST00000288602 CCL18P55774 89 aa13.15□□□□□ -0.3
BRAF-201ENST00000288602 IBA57-AS1B1ANH7 110 aa13.14□□□□□ -0.31
BRAF-201ENST00000288602 Q8IZM0 81 aa13.14□□□□□ -0.31
BRAF-201ENST00000288602 IGKV2-28A0A075B6P5 120 aa13.14□□□□□ -0.31
BRAF-201ENST00000288602 IGKV2D-28P01615 120 aa13.14□□□□□ -0.31
BRAF-201ENST00000288602 MALP21145 153 aa13.14□□□□□ -0.31
BRAF-201ENST00000288602 A0A0J9YWU9 116 aa13.13□□□□□ -0.31
BRAF-201ENST00000288602 LINC00337Q8N6G1 96 aa13.13□□□□□ -0.31
BRAF-201ENST00000288602 KPRPQ5T749 579 aaPredicted RBP13.13□□□□□ -0.31
BRAF-201ENST00000288602 KIAA0087Q14695 138 aa13.12□□□□□ -0.31
BRAF-201ENST00000288602 NBEAL1Q6ZS30 2694 aa13.11□□□□□ -0.31
BRAF-201ENST00000288602 NANOS2P60321 138 aaKnown RBP13.11□□□□□ -0.31
BRAF-201ENST00000288602 LST1O00453 97 aa13.11□□□□□ -0.31
BRAF-201ENST00000288602 LINC00526Q96FQ7 95 aa13.11□□□□□ -0.31
BRAF-201ENST00000288602 C9orf116Q5BN46 136 aaPredicted RBP13.1□□□□□ -0.31
BRAF-201ENST00000288602 WFDC10BQ8IUB3 73 aa13.1□□□□□ -0.31
BRAF-201ENST00000288602 ENHOQ6UWT2 76 aa13.09□□□□□ -0.31
BRAF-201ENST00000288602 TRBV10-2A0A0K0K1G8 114 aa13.08□□□□□ -0.31
BRAF-201ENST00000288602 CRPP02741 224 aa13.08□□□□□ -0.32
BRAF-201ENST00000288602 CFAP161Q6P656 301 aa13.08□□□□□ -0.32
BRAF-201ENST00000288602 C6orf223Q8N319 242 aa13.08□□□□□ -0.32
BRAF-201ENST00000288602 NTN5Q8WTR8 489 aaPredicted RBP13.08□□□□□ -0.32
BRAF-201ENST00000288602 LINC01561Q8N1V8 128 aa13.06□□□□□ -0.32
BRAF-201ENST00000288602 ANAPC13Q9BS18 74 aa13.06□□□□□ -0.32
BRAF-201ENST00000288602 TRAV13-2A0A0B4J235 113 aa13.06□□□□□ -0.32
BRAF-201ENST00000288602 TEX49A0A1B0GTD5 131 aa13.06□□□□□ -0.32
BRAF-201ENST00000288602 UBE2WQ96B02 151 aa13.06□□□□□ -0.32
BRAF-201ENST00000288602 PPDPFQ9H3Y8 114 aa13.06□□□□□ -0.32
BRAF-201ENST00000288602 PRR34Q9NV39 138 aa13.06□□□□□ -0.32
BRAF-201ENST00000288602 SVIPQ8NHG7 77 aa13.04□□□□□ -0.32
BRAF-201ENST00000288602 FAM218AQ96MZ4 157 aa13.04□□□□□ -0.32
BRAF-201ENST00000288602 PRR3P79522 188 aaKnown RBP13.04□□□□□ -0.32
BRAF-201ENST00000288602 C10orf25Q5T742 122 aa13.04□□□□□ -0.32
BRAF-201ENST00000288602 C11orf45Q8TAV5 145 aa13.04□□□□□ -0.32
BRAF-201ENST00000288602 ESRGQ1W209 222 aa13.03□□□□□ -0.32
BRAF-201ENST00000288602 DEFB131BA0A096LNP1 70 aa13.03□□□□□ -0.32
BRAF-201ENST00000288602 MRAPQ8TCY5 172 aa13.03□□□□□ -0.32
BRAF-201ENST00000288602 OR13C6PQ8NH95 151 aa13.02□□□□□ -0.32
BRAF-201ENST00000288602 SMIM11BQ8TCY0 68 aa13.02□□□□□ -0.32
BRAF-201ENST00000288602 M0QXV9 152 aa13.02□□□□□ -0.33
BRAF-201ENST00000288602 UNQ6190/PRO20217Q6UXQ8 127 aa13.02□□□□□ -0.33
BRAF-201ENST00000288602 H3BNG1 76 aa13.01□□□□□ -0.33
BRAF-201ENST00000288602 SPAG11BQ08648 103 aa13.01□□□□□ -0.33
BRAF-201ENST00000288602 RPL28P46779 137 aaKnown RBP13□□□□□ -0.33
BRAF-201ENST00000288602 TRAV8-4A0A0B4J246 113 aa13□□□□□ -0.33
BRAF-201ENST00000288602 CXCL5P42830 114 aa12.99□□□□□ -0.33
BRAF-201ENST00000288602 DEFB121Q5J5C9 76 aa12.99□□□□□ -0.33
BRAF-201ENST00000288602 SS18L2Q9UHA2 77 aa12.99□□□□□ -0.33
BRAF-201ENST00000288602 KLK5Q9Y337 293 aaPredicted RBP12.98□□□□□ -0.33
BRAF-201ENST00000288602 MGAM2Q2M2H8 2515 aa12.98□□□□□ -0.33
BRAF-201ENST00000288602 H3BT86 120 aa12.97□□□□□ -0.33
BRAF-201ENST00000288602 SNCGO76070 127 aa12.97□□□□□ -0.33
BRAF-201ENST00000288602 GAGE2BQ13066 116 aa12.97□□□□□ -0.33
BRAF-201ENST00000288602 GAGE2EQ4V326 116 aa12.97□□□□□ -0.33
BRAF-201ENST00000288602 LINC01600Q96MT4 127 aa12.97□□□□□ -0.33
BRAF-201ENST00000288602 Q9HAA7 133 aa12.97□□□□□ -0.33
BRAF-201ENST00000288602 GAGE2DQ9UEU5 116 aa12.97□□□□□ -0.33
BRAF-201ENST00000288602 Q8NDZ9 215 aa12.96□□□□□ -0.33
BRAF-201ENST00000288602 NHLRC4P0CG21 123 aaPredicted RBP12.96□□□□□ -0.34
BRAF-201ENST00000288602 K7EIL1 84 aa12.95□□□□□ -0.34
BRAF-201ENST00000288602 COX17Q14061 63 aa12.95□□□□□ -0.34
BRAF-201ENST00000288602 A0A087WYN8 130 aa12.94□□□□□ -0.34
BRAF-201ENST00000288602 HUWE1Q7Z6Z7 4374 aaKnown RBP12.94□□□□□ -0.34
BRAF-201ENST00000288602 B5MCH6 92 aa12.94□□□□□ -0.34
BRAF-201ENST00000288602 HIGD2BQ4VC39 106 aa12.93□□□□□ -0.34
BRAF-201ENST00000288602 NDUFV3P56181 108 aaKnown RBP12.92□□□□□ -0.34
BRAF-201ENST00000288602 NCR3O14931 201 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms