RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 H0YGX0 51 aa10.56□□□□□ -0.72
DDX56-201ENST00000258772 PAX4O43316 350 aa10.56□□□□□ -0.72
DDX56-201ENST00000258772 LINC00482Q8N8I6 264 aa10.56□□□□□ -0.72
DDX56-201ENST00000258772 PRO0255Q9UI72 69 aa10.56□□□□□ -0.72
DDX56-201ENST00000258772 INAFM2P0DMQ5 153 aa10.56□□□□□ -0.72
DDX56-201ENST00000258772 SMCR5Q8TEV8 140 aa10.56□□□□□ -0.72
DDX56-201ENST00000258772 C11orf68Q9H3H3 251 aaKnown RBP10.56□□□□□ -0.72
DDX56-201ENST00000258772 B5MCH6 92 aa10.55□□□□□ -0.72
DDX56-201ENST00000258772 SMIM9A6NGZ8 99 aa10.55□□□□□ -0.72
DDX56-201ENST00000258772 CCDC179H3BU77 68 aa10.55□□□□□ -0.72
DDX56-201ENST00000258772 DNAL4O96015 105 aa10.55□□□□□ -0.72
DDX56-201ENST00000258772 SDIM1Q6ZPB5 146 aa10.55□□□□□ -0.72
DDX56-201ENST00000258772 A0A096LPF7 62 aa10.54□□□□□ -0.72
DDX56-201ENST00000258772 Q8IZM0 81 aa10.54□□□□□ -0.72
DDX56-201ENST00000258772 HIVEP2P31629 2446 aa10.54□□□□□ -0.72
DDX56-201ENST00000258772 CLPSL2Q6UWE3 100 aa10.53□□□□□ -0.72
DDX56-201ENST00000258772 LINC00643Q86TS7 51 aa10.53□□□□□ -0.72
DDX56-201ENST00000258772 IMUPQ9GZP8 106 aa10.53□□□□□ -0.72
DDX56-201ENST00000258772 OR13C6PQ8NH95 151 aa10.53□□□□□ -0.72
DDX56-201ENST00000258772 GCN1Q92616 2671 aaKnown RBP10.53□□□□□ -0.72
DDX56-201ENST00000258772 ATP5G1P05496 136 aa10.52□□□□□ -0.72
DDX56-201ENST00000258772 SMR3AQ99954 134 aa10.52□□□□□ -0.73
DDX56-201ENST00000258772 LINC01561Q8N1V8 128 aa10.51□□□□□ -0.73
DDX56-201ENST00000258772 NBEAL2Q6ZNJ1 2754 aa10.51□□□□□ -0.73
DDX56-201ENST00000258772 LY6G6DO95868 133 aa10.51□□□□□ -0.73
DDX56-201ENST00000258772 GAGE2AQ6NT46 116 aa10.51□□□□□ -0.73
DDX56-201ENST00000258772 LECT2O14960 151 aa10.5□□□□□ -0.73
DDX56-201ENST00000258772 LYRM9A8MSI8 78 aa10.5□□□□□ -0.73
DDX56-201ENST00000258772 C9orf129Q5T035 196 aaKnown RBP10.5□□□□□ -0.73
DDX56-201ENST00000258772 SS18L2Q9UHA2 77 aa10.5□□□□□ -0.73
DDX56-201ENST00000258772 LINC00269Q8N2A0 174 aa10.49□□□□□ -0.73
DDX56-201ENST00000258772 SPATA3Q8NHX4 192 aa10.48□□□□□ -0.73
DDX56-201ENST00000258772 KIAA0087Q14695 138 aa10.47□□□□□ -0.73
DDX56-201ENST00000258772 CD164L2Q6UWJ8 174 aa10.47□□□□□ -0.73
DDX56-201ENST00000258772 OBSCN-AS1Q96MR7 158 aa10.47□□□□□ -0.73
DDX56-201ENST00000258772 FAM236AA0A1B0GUQ0 79 aa10.47□□□□□ -0.73
DDX56-201ENST00000258772 FAM236BA0A1B0GV22 79 aa10.47□□□□□ -0.73
DDX56-201ENST00000258772 DEFB4AO15263 64 aa10.47□□□□□ -0.73
DDX56-201ENST00000258772 C14orf132Q9NPU4 83 aa10.46□□□□□ -0.73
DDX56-201ENST00000258772 DEFB135Q30KP9 77 aa10.46□□□□□ -0.74
DDX56-201ENST00000258772 CHCHD10Q8WYQ3 142 aaPredicted RBP10.46□□□□□ -0.74
DDX56-201ENST00000258772 UNC79Q9P2D8 2635 aa10.45□□□□□ -0.74
DDX56-201ENST00000258772 SLPIP03973 132 aa10.45□□□□□ -0.74
DDX56-201ENST00000258772 PRR3P79522 188 aaKnown RBP10.45□□□□□ -0.74
DDX56-201ENST00000258772 C5orf47Q569G3 176 aa10.45□□□□□ -0.74
DDX56-201ENST00000258772 C9orf66Q5T8R8 295 aa10.45□□□□□ -0.74
DDX56-201ENST00000258772 IGLV10-54A0A075B6I4 117 aa10.45□□□□□ -0.74
DDX56-201ENST00000258772 J3QKU1 62 aa10.45□□□□□ -0.74
DDX56-201ENST00000258772 ANGP03950 147 aaKnown RBP10.45□□□□□ -0.74
DDX56-201ENST00000258772 Q8N3U1 123 aa10.45□□□□□ -0.74
DDX56-201ENST00000258772 REG3AQ06141 175 aa10.44□□□□□ -0.74
DDX56-201ENST00000258772 COX17Q14061 63 aa10.44□□□□□ -0.74
DDX56-201ENST00000258772 KLK5Q9Y337 293 aaPredicted RBP10.44□□□□□ -0.74
DDX56-201ENST00000258772 HELZ2Q9BYK8 2649 aaKnown RBP10.44□□□□□ -0.74
DDX56-201ENST00000258772 CXCL5P42830 114 aa10.44□□□□□ -0.74
DDX56-201ENST00000258772 NANOS2P60321 138 aaKnown RBP10.44□□□□□ -0.74
DDX56-201ENST00000258772 FASNP49327 2511 aaKnown RBP10.43□□□□□ -0.74
DDX56-201ENST00000258772 NDUFC2O95298 119 aa10.43□□□□□ -0.74
DDX56-201ENST00000258772 IGHV4-28A0A0C4DH34 117 aa10.42□□□□□ -0.74
DDX56-201ENST00000258772 NCR3O14931 201 aa10.42□□□□□ -0.74
DDX56-201ENST00000258772 DAD1P61803 113 aa10.42□□□□□ -0.74
DDX56-201ENST00000258772 ORMDL1Q9P0S3 153 aa10.42□□□□□ -0.74
DDX56-201ENST00000258772 VWFP04275 2813 aa10.42□□□□□ -0.74
DDX56-201ENST00000258772 APOC4P55056 127 aa10.41□□□□□ -0.74
DDX56-201ENST00000258772 C9orf116Q5BN46 136 aaPredicted RBP10.41□□□□□ -0.74
DDX56-201ENST00000258772 LINC00167Q96N53 147 aa10.4□□□□□ -0.74
DDX56-201ENST00000258772 TMEM126AQ9H061 195 aa10.4□□□□□ -0.74
DDX56-201ENST00000258772 A0A1B0GX51 115 aa10.4□□□□□ -0.74
DDX56-201ENST00000258772 CELA1Q9UNI1 258 aa10.39□□□□□ -0.75
DDX56-201ENST00000258772 Q8N814 137 aa10.39□□□□□ -0.75
DDX56-201ENST00000258772 LINC00846Q9NV44 126 aa10.39□□□□□ -0.75
DDX56-201ENST00000258772 Q8NAQ8 132 aa10.38□□□□□ -0.75
DDX56-201ENST00000258772 MIFP14174 115 aa10.36□□□□□ -0.75
DDX56-201ENST00000258772 Q8NDZ9 215 aa10.36□□□□□ -0.75
DDX56-201ENST00000258772 NOTCH2Q04721 2471 aa10.35□□□□□ -0.75
DDX56-201ENST00000258772 LELP1Q5T871 98 aa10.35□□□□□ -0.75
DDX56-201ENST00000258772 UNQ6190/PRO20217Q6UXQ8 127 aa10.35□□□□□ -0.75
DDX56-201ENST00000258772 C1orf43Q9BWL3 253 aa10.35□□□□□ -0.75
DDX56-201ENST00000258772 TMEM256-PLSCR3K7ERE1 68 aa10.34□□□□□ -0.75
DDX56-201ENST00000258772 SPART-AS1P0CW21 52 aa10.34□□□□□ -0.75
DDX56-201ENST00000258772 C10orf25Q5T742 122 aa10.34□□□□□ -0.75
DDX56-201ENST00000258772 C6orf223Q8N319 242 aa10.34□□□□□ -0.75
DDX56-201ENST00000258772 CCKP06307 115 aa10.34□□□□□ -0.75
DDX56-201ENST00000258772 HTN3P15516 51 aa10.34□□□□□ -0.75
DDX56-201ENST00000258772 Q6JHZ5 121 aa10.34□□□□□ -0.75
DDX56-201ENST00000258772 INAFM1C9JVW0 142 aa10.33□□□□□ -0.76
DDX56-201ENST00000258772 JMJD7-PLA2G4BH0Y9G9 81 aa10.33□□□□□ -0.76
DDX56-201ENST00000258772 HIST1H4AP62805 103 aaKnown RBP10.33□□□□□ -0.76
DDX56-201ENST00000258772 SPAG11BQ08648 103 aa10.33□□□□□ -0.76
DDX56-201ENST00000258772 C6orf99Q4VX62 202 aa10.33□□□□□ -0.76
DDX56-201ENST00000258772 IGKV3D-7A0A0C4DH55 119 aa10.33□□□□□ -0.76
DDX56-201ENST00000258772 C3orf22Q8N5N4 141 aa10.33□□□□□ -0.76
DDX56-201ENST00000258772 OXLD1Q5BKU9 147 aa10.32□□□□□ -0.76
DDX56-201ENST00000258772 S100A7L2Q5SY68 101 aa10.32□□□□□ -0.76
DDX56-201ENST00000258772 LINC00526Q96FQ7 95 aa10.32□□□□□ -0.76
DDX56-201ENST00000258772 C3orf56Q8N813 242 aa10.32□□□□□ -0.76
DDX56-201ENST00000258772 PRR34Q9NV39 138 aa10.32□□□□□ -0.76
DDX56-201ENST00000258772 KLK12Q9UKR0 248 aa10.32□□□□□ -0.76
DDX56-201ENST00000258772 A0A0J9YWU9 116 aa10.31□□□□□ -0.76
DDX56-201ENST00000258772 CYSRT1A8MQ03 144 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms