RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 SPRR2AP35326 72 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 C9orf116Q5BN46 136 aaPredicted RBP0.58□□□□□ -2.32
VBP1-204ENST00000625964 CFAP126Q5VTH2 177 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 XAF1Q6GPH4 301 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 EIF5AL1Q6IS14 154 aaKnown RBP0.58□□□□□ -2.32
VBP1-204ENST00000625964 ZNF818PQ6ZRF7 136 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 PHF5AQ7RTV0 110 aaKnown RBP0.58□□□□□ -2.32
VBP1-204ENST00000625964 PACRGLQ8N7B6 248 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 DYNC2LI1Q8TCX1 351 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 RNASEH2CQ8TDP1 164 aaKnown RBP0.58□□□□□ -2.32
VBP1-204ENST00000625964 BORCS5Q969J3 196 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 SMIM19Q96E16 107 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 SLC50A1Q9BRV3 221 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 SIKE1Q9BRV8 207 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 ENY2Q9NPA8 101 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 SSR3Q9UNL2 185 aa0.58□□□□□ -2.32
VBP1-204ENST00000625964 LOC107984640A0A0U1RRK4 108 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 FAM24AA6NFZ4 105 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 HMSDA8MTL9 139 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 GABARAPH6UMI1 98 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 GPR31O00270 319 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 APOA1P02647 267 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 OR4E1P0C645 316 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 HIST1H1DP16402 221 aaKnown RBP0.57□□□□□ -2.32
VBP1-204ENST00000625964 CXCL2P19875 107 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 SPRR2DP22532 72 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 FXYD4P59646 89 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 SPCS3P61009 180 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 MAGOHP61326 146 aaKnown RBP0.57□□□□□ -2.32
VBP1-204ENST00000625964 PKIAP61925 76 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 RPS25P62851 125 aaKnown RBP0.57□□□□□ -2.32
VBP1-204ENST00000625964 SURF2Q15527 256 aaPredicted RBP0.57□□□□□ -2.32
VBP1-204ENST00000625964 SPAG11AQ6PDA7 123 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 Q6Q795 121 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 LYZL1Q6UWQ5 148 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 LCN15Q6UWW0 184 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 CROCCP2Q86T23 111 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 LINC00269Q8N2A0 174 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 OR13C8Q8NGS7 320 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 SFRP2Q96HF1 295 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 TRGV9Q99603 122 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 PDCD10Q9BUL8 212 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 TMEM147Q9BVK8 224 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 AGPAT4-IT1Q9H0P7 198 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 MED9Q9NWA0 146 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 UBE2D4Q9Y2X8 147 aa0.57□□□□□ -2.32
VBP1-204ENST00000625964 GVQW2A0A096LPI5 108 aaPredicted RBP0.56□□□□□ -2.32
VBP1-204ENST00000625964 TRBV6-8A0A0A6YYG3 113 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 RBAKDNA6NC62 111 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 G3V2T6 193 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 PLA2G10O15496 165 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 EDF1O60869 148 aaKnown RBP0.56□□□□□ -2.32
VBP1-204ENST00000625964 HYPMO75409 117 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 IGKV1-5P01602 117 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 FGF6P10767 208 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 RAB5CP51148 216 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 TAS2R20P59543 309 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 NMSQ5H8A3 153 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 CLPSL2Q6UWE3 100 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 OR2T35Q8NGX2 323 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 RAB2BQ8WUD1 216 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 CANT1Q8WVQ1 401 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 PTH2Q96A98 100 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 LINC00526Q96FQ7 95 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 CARD19Q96LW7 228 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 TTTY13Q9BZ97 58 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.56□□□□□ -2.32
VBP1-204ENST00000625964 FGFR1OP2Q9NVK5 253 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 HIGD1AQ9Y241 93 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 TIMM9Q9Y5J7 89 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 PXMP4Q9Y6I8 212 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 U3KQ87 197 aa0.56□□□□□ -2.32
VBP1-204ENST00000625964 DUXBA0A1W2PPF3 345 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 A6NN06 94 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 CEBPZOSA8MTT3 80 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 A8MWV9 139 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 H3BQ15 152 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 M0R3E3 92 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 OR5G3P0C626 314 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 HIST1H1EP10412 219 aaKnown RBP0.55□□□□□ -2.32
VBP1-204ENST00000625964 S100GP29377 79 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 RPL28P46779 137 aaKnown RBP0.55□□□□□ -2.32
VBP1-204ENST00000625964 ETV1P50549 477 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 AQP4P55087 323 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 PIGPP57054 158 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 GNG2P59768 71 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 UBE2D3P61077 147 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 UBE2D2P62837 147 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 UBE2BP63146 152 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 TMEM78Q5T7P6 136 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 Q6AWC8 147 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 LPCAT3Q6P1A2 487 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 C7orf65Q6ZTY9 151 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 S100A7AQ86SG5 101 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 BPIFA4PQ86YQ2 179 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 SPRR2FQ96RM1 72 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 CCDC90BQ9GZT6 254 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 ATG5Q9H1Y0 275 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 COMMD3Q9UBI1 195 aa0.55□□□□□ -2.32
VBP1-204ENST00000625964 CACFD1Q9UGQ2 172 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms