RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 COX7BP24311 80 aa8.99□□□□□ -0.97
CDH1-212ENST00000611625 LINC00315P59091 139 aa8.99□□□□□ -0.97
CDH1-212ENST00000611625 UBE2BP63146 152 aa8.99□□□□□ -0.97
CDH1-212ENST00000611625 MTORP42345 2549 aa8.99□□□□□ -0.97
CDH1-212ENST00000611625 NREPQ16612 68 aa8.99□□□□□ -0.97
CDH1-212ENST00000611625 LINC00482Q8N8I6 264 aa8.99□□□□□ -0.97
CDH1-212ENST00000611625 LINC00959A0A1B0GUT2 108 aa8.98□□□□□ -0.97
CDH1-212ENST00000611625 HIGD2BQ4VC39 106 aa8.98□□□□□ -0.97
CDH1-212ENST00000611625 ZNF843Q8N446 348 aa8.98□□□□□ -0.97
CDH1-212ENST00000611625 SMIM11BQ8TCY0 68 aa8.98□□□□□ -0.97
CDH1-212ENST00000611625 MRAPQ8TCY5 172 aa8.98□□□□□ -0.97
CDH1-212ENST00000611625 IMUPQ9GZP8 106 aa8.98□□□□□ -0.97
CDH1-212ENST00000611625 CDK2AP2O75956 126 aa8.98□□□□□ -0.97
CDH1-212ENST00000611625 C6orf99Q4VX62 202 aa8.98□□□□□ -0.97
CDH1-212ENST00000611625 LINC00694P0DN24 101 aa8.97□□□□□ -0.97
CDH1-212ENST00000611625 CLUHP3Q96NS8 147 aa8.97□□□□□ -0.97
CDH1-212ENST00000611625 TRAV23DV6A0A075B6W5 121 aa8.97□□□□□ -0.97
CDH1-212ENST00000611625 COX6A2Q02221 97 aa8.97□□□□□ -0.97
CDH1-212ENST00000611625 Q6ZSN1 163 aa8.97□□□□□ -0.97
CDH1-212ENST00000611625 TRANK1O15050 2925 aa8.97□□□□□ -0.97
CDH1-212ENST00000611625 C1orf158Q8N1D5 194 aa8.97□□□□□ -0.97
CDH1-212ENST00000611625 FAM19A4Q96LR4 140 aa8.97□□□□□ -0.97
CDH1-212ENST00000611625 CCL18P55774 89 aa8.97□□□□□ -0.97
CDH1-212ENST00000611625 FAM240AA0A1B0GVK7 77 aa8.96□□□□□ -0.97
CDH1-212ENST00000611625 IGHV4-28A0A0C4DH34 117 aa8.96□□□□□ -0.98
CDH1-212ENST00000611625 BEAN1Q3B7T3 259 aa8.96□□□□□ -0.98
CDH1-212ENST00000611625 CD164L2Q6UWJ8 174 aa8.96□□□□□ -0.98
CDH1-212ENST00000611625 KRTAP10-9P60411 292 aa8.95□□□□□ -0.98
CDH1-212ENST00000611625 UPK3BQ9BT76 320 aa8.95□□□□□ -0.98
CDH1-212ENST00000611625 C3orf22Q8N5N4 141 aa8.95□□□□□ -0.98
CDH1-212ENST00000611625 COL27A1Q8IZC6 1860 aaPredicted RBP8.95□□□□□ -0.98
CDH1-212ENST00000611625 Q6Q795 121 aa8.94□□□□□ -0.98
CDH1-212ENST00000611625 CCDC179H3BU77 68 aa8.94□□□□□ -0.98
CDH1-212ENST00000611625 ATP5EP2Q5VTU8 51 aa8.94□□□□□ -0.98
CDH1-212ENST00000611625 XAGE1AQ9HD64 81 aa8.94□□□□□ -0.98
CDH1-212ENST00000611625 CSDC2Q9Y534 153 aaKnown RBP8.94□□□□□ -0.98
CDH1-212ENST00000611625 BRCA2P51587 3418 aa8.93□□□□□ -0.98
CDH1-212ENST00000611625 ZNF462Q96JM2 2506 aa8.93□□□□□ -0.98
CDH1-212ENST00000611625 MIFP14174 115 aa8.93□□□□□ -0.98
CDH1-212ENST00000611625 LAMA3Q16787 3333 aa8.93□□□□□ -0.98
CDH1-212ENST00000611625 DOPEY1Q5JWR5 2465 aa8.92□□□□□ -0.98
CDH1-212ENST00000611625 Q8IZM0 81 aa8.92□□□□□ -0.98
CDH1-212ENST00000611625 ENHOQ6UWT2 76 aa8.91□□□□□ -0.98
CDH1-212ENST00000611625 TMEM258P61165 79 aa8.91□□□□□ -0.98
CDH1-212ENST00000611625 C20orf197Q8N268 126 aa8.91□□□□□ -0.98
CDH1-212ENST00000611625 RPL28P46779 137 aaKnown RBP8.91□□□□□ -0.98
CDH1-212ENST00000611625 LINC00526Q96FQ7 95 aa8.91□□□□□ -0.98
CDH1-212ENST00000611625 CDIP1Q9H305 208 aa8.91□□□□□ -0.98
CDH1-212ENST00000611625 IGLV4-60A0A075B6I1 120 aa8.91□□□□□ -0.98
CDH1-212ENST00000611625 HILS1P60008 231 aa8.91□□□□□ -0.98
CDH1-212ENST00000611625 PRO0461Q9UI25 63 aa8.9□□□□□ -0.98
CDH1-212ENST00000611625 KLK9Q2XQG4 91 aa8.9□□□□□ -0.98
CDH1-212ENST00000611625 A0A087WZ39 114 aa8.9□□□□□ -0.99
CDH1-212ENST00000611625 SMCPP49901 116 aaPredicted RBP8.9□□□□□ -0.99
CDH1-212ENST00000611625 M0QXV9 152 aa8.89□□□□□ -0.99
CDH1-212ENST00000611625 IGLV1-51P01701 117 aa8.89□□□□□ -0.99
CDH1-212ENST00000611625 LAMA2P24043 3122 aaKnown RBP8.89□□□□□ -0.99
CDH1-212ENST00000611625 USP17L23D6RBM5 183 aa8.89□□□□□ -0.99
CDH1-212ENST00000611625 Q6ZQY7 126 aa8.89□□□□□ -0.99
CDH1-212ENST00000611625 INAFM1C9JVW0 142 aa8.88□□□□□ -0.99
CDH1-212ENST00000611625 ANKRD17O75179 2603 aaKnown RBP8.88□□□□□ -0.99
CDH1-212ENST00000611625 C11orf72Q8NBR9 251 aa8.88□□□□□ -0.99
CDH1-212ENST00000611625 LELP1Q5T871 98 aa8.87□□□□□ -0.99
CDH1-212ENST00000611625 COX17Q14061 63 aa8.87□□□□□ -0.99
CDH1-212ENST00000611625 SERP2Q8N6R1 65 aa8.87□□□□□ -0.99
CDH1-212ENST00000611625 FHL2Q14192 279 aa8.87□□□□□ -0.99
CDH1-212ENST00000611625 C11orf45Q8TAV5 145 aa8.87□□□□□ -0.99
CDH1-212ENST00000611625 SCXQ7RTU7 201 aa8.86□□□□□ -0.99
CDH1-212ENST00000611625 KIR2DL5BQ8NHK3 375 aa8.86□□□□□ -0.99
CDH1-212ENST00000611625 BPY2O14599 106 aa8.86□□□□□ -0.99
CDH1-212ENST00000611625 COX7CP15954 63 aa8.86□□□□□ -0.99
CDH1-212ENST00000611625 Q6JHZ5 121 aa8.85□□□□□ -0.99
CDH1-212ENST00000611625 FAM110AQ9BQ89 295 aa8.85□□□□□ -0.99
CDH1-212ENST00000611625 A0A087WYN8 130 aa8.84□□□□□ -0.99
CDH1-212ENST00000611625 IGLV5-39A0A0G2JS06 123 aa8.84□□□□□ -0.99
CDH1-212ENST00000611625 ACANP16112 2415 aa8.84□□□□□ -0.99
CDH1-212ENST00000611625 DEFB131BA0A096LNP1 70 aa8.84□□□□□ -0.99
CDH1-212ENST00000611625 CYSRT1A8MQ03 144 aa8.83□□□□□ -1
CDH1-212ENST00000611625 LY6G6DO95868 133 aa8.83□□□□□ -1
CDH1-212ENST00000611625 SYCNQ0VAF6 134 aa8.83□□□□□ -1
CDH1-212ENST00000611625 MUC7Q8TAX7 377 aa8.83□□□□□ -1
CDH1-212ENST00000611625 MUC4Q99102 2169 aa8.82□□□□□ -1
CDH1-212ENST00000611625 Q9UF83 564 aa8.82□□□□□ -1
CDH1-212ENST00000611625 UNQ6190/PRO20217Q6UXQ8 127 aa8.82□□□□□ -1
CDH1-212ENST00000611625 C9orf116Q5BN46 136 aaPredicted RBP8.82□□□□□ -1
CDH1-212ENST00000611625 CCKP06307 115 aa8.81□□□□□ -1
CDH1-212ENST00000611625 KPRPQ5T749 579 aaPredicted RBP8.81□□□□□ -1
CDH1-212ENST00000611625 FAM236DA0A1B0GTK5 79 aa8.81□□□□□ -1
CDH1-212ENST00000611625 FAM236CP0DP71 79 aa8.81□□□□□ -1
CDH1-212ENST00000611625 MP68P56378 58 aa8.81□□□□□ -1
CDH1-212ENST00000611625 PRR3P79522 188 aaKnown RBP8.81□□□□□ -1
CDH1-212ENST00000611625 PKIGQ9Y2B9 76 aa8.81□□□□□ -1
CDH1-212ENST00000611625 Q8N2B8 174 aa8.81□□□□□ -1
CDH1-212ENST00000611625 LINC00337Q8N6G1 96 aa8.81□□□□□ -1
CDH1-212ENST00000611625 Q8N814 137 aa8.8□□□□□ -1
CDH1-212ENST00000611625 M0R378 163 aa8.8□□□□□ -1
CDH1-212ENST00000611625 NTM-AS1Q6ZSK4 140 aa8.8□□□□□ -1
CDH1-212ENST00000611625 ZNF73O43830 326 aaPredicted RBP8.8□□□□□ -1
CDH1-212ENST00000611625 UNC80Q8N2C7 3258 aa8.79□□□□□ -1
CDH1-212ENST00000611625 IGLV5-45A0A087WSX0 123 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms