RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 LAMTOR2Q9Y2Q5 125 aa9.77□□□□□ -0.85
TGFB1-202ENST00000597453 IGLV10-54A0A075B6I4 117 aa9.76□□□□□ -0.85
TGFB1-202ENST00000597453 LINC00310P59036 64 aa9.76□□□□□ -0.85
TGFB1-202ENST00000597453 BAGE3Q86Y29 109 aa9.76□□□□□ -0.85
TGFB1-202ENST00000597453 PRELID3AQ96N28 172 aa9.76□□□□□ -0.85
TGFB1-202ENST00000597453 PANO1I0J062 215 aa9.75□□□□□ -0.85
TGFB1-202ENST00000597453 SERF1AO75920 110 aa9.75□□□□□ -0.85
TGFB1-202ENST00000597453 DGAT2L7PQ6IED9 249 aa9.75□□□□□ -0.85
TGFB1-202ENST00000597453 C9orf163Q8N9P6 203 aa9.75□□□□□ -0.85
TGFB1-202ENST00000597453 TMEM101Q96IK0 257 aa9.75□□□□□ -0.85
TGFB1-202ENST00000597453 ZNF664Q8N3J9 261 aa9.74□□□□□ -0.85
TGFB1-202ENST00000597453 OR5A1Q8NGJ0 315 aa9.74□□□□□ -0.85
TGFB1-202ENST00000597453 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.74□□□□□ -0.85
TGFB1-202ENST00000597453 PRSS47A8MTI9 375 aa9.73□□□□□ -0.85
TGFB1-202ENST00000597453 NUPR1O60356 82 aa9.73□□□□□ -0.85
TGFB1-202ENST00000597453 SMAGPQ0VAQ4 97 aa9.73□□□□□ -0.85
TGFB1-202ENST00000597453 TEX43Q6ZNM6 134 aa9.73□□□□□ -0.85
TGFB1-202ENST00000597453 C14orf144Q96I85 54 aa9.73□□□□□ -0.85
TGFB1-202ENST00000597453 CSDC2Q9Y534 153 aaKnown RBP9.73□□□□□ -0.85
TGFB1-202ENST00000597453 SCGB1D1O95968 90 aa9.72□□□□□ -0.85
TGFB1-202ENST00000597453 HNRNPA3P51991 378 aaKnown RBP9.72□□□□□ -0.85
TGFB1-202ENST00000597453 RPL37AP61513 92 aaKnown RBP9.72□□□□□ -0.85
TGFB1-202ENST00000597453 SDIM1Q6ZPB5 146 aa9.72□□□□□ -0.85
TGFB1-202ENST00000597453 MAP1LC3AQ9H492 121 aa9.72□□□□□ -0.85
TGFB1-202ENST00000597453 UBE2D4Q9Y2X8 147 aa9.72□□□□□ -0.85
TGFB1-202ENST00000597453 TIMM21Q9BVV7 248 aa9.71□□□□□ -0.86
TGFB1-202ENST00000597453 CDC42SE2Q9NRR3 84 aa9.71□□□□□ -0.86
TGFB1-202ENST00000597453 IGKV3OR2-268A0A0C4DH90 116 aa9.7□□□□□ -0.86
TGFB1-202ENST00000597453 hDV102S1A0JD36 115 aa9.7□□□□□ -0.86
TGFB1-202ENST00000597453 OXTP01178 125 aa9.7□□□□□ -0.86
TGFB1-202ENST00000597453 C18orf32Q8TCD1 76 aa9.7□□□□□ -0.86
TGFB1-202ENST00000597453 PRO1933Q9H354 126 aa9.7□□□□□ -0.86
TGFB1-202ENST00000597453 CNBPP62633 177 aaKnown RBP9.69□□□□□ -0.86
TGFB1-202ENST00000597453 CHCHD10Q8WYQ3 142 aaPredicted RBP9.69□□□□□ -0.86
TGFB1-202ENST00000597453 C2orf88Q9BSF0 95 aa9.69□□□□□ -0.86
TGFB1-202ENST00000597453 ALKBH7Q9BT30 221 aaPredicted RBP9.69□□□□□ -0.86
TGFB1-202ENST00000597453 LOC389332A0A1B0GUA5 103 aa9.68□□□□□ -0.86
TGFB1-202ENST00000597453 LINC00959A0A1B0GUT2 108 aa9.68□□□□□ -0.86
TGFB1-202ENST00000597453 GAGE12HA6NDE8 117 aa9.68□□□□□ -0.86
TGFB1-202ENST00000597453 SLPIP03973 132 aa9.68□□□□□ -0.86
TGFB1-202ENST00000597453 RPL39P62891 51 aaKnown RBP9.68□□□□□ -0.86
TGFB1-202ENST00000597453 Q8N8P6 123 aa9.68□□□□□ -0.86
TGFB1-202ENST00000597453 SPANXA1Q9NS26 97 aa9.68□□□□□ -0.86
TGFB1-202ENST00000597453 UBR4Q5T4S7 5183 aa9.68□□□□□ -0.86
TGFB1-202ENST00000597453 CIRBPQ14011 172 aaKnown RBP9.67□□□□□ -0.86
TGFB1-202ENST00000597453 KIAA1644Q3SXP7 199 aa9.67□□□□□ -0.86
TGFB1-202ENST00000597453 Q6ZUT4 128 aa9.67□□□□□ -0.86
TGFB1-202ENST00000597453 NXT2Q9NPJ8 142 aaKnown RBP9.67□□□□□ -0.86
TGFB1-202ENST00000597453 K7EMI3 77 aa9.66□□□□□ -0.86
TGFB1-202ENST00000597453 SS18Q15532 418 aa9.66□□□□□ -0.86
TGFB1-202ENST00000597453 CHCHD1Q96BP2 118 aaKnown RBP9.66□□□□□ -0.86
TGFB1-202ENST00000597453 CCL25O15444 150 aa9.65□□□□□ -0.86
TGFB1-202ENST00000597453 CHTF8P0CG12 524 aa9.65□□□□□ -0.86
TGFB1-202ENST00000597453 MRPS36P82909 103 aaKnown RBP9.65□□□□□ -0.86
TGFB1-202ENST00000597453 FOXI1Q12951 378 aa9.65□□□□□ -0.86
TGFB1-202ENST00000597453 SERTAD4-AS1Q5TG53 156 aa9.65□□□□□ -0.86
TGFB1-202ENST00000597453 C15orf56Q8N910 161 aa9.65□□□□□ -0.86
TGFB1-202ENST00000597453 IGHV3-64A0A075B6Q5 118 aa9.64□□□□□ -0.87
TGFB1-202ENST00000597453 HSBP1O75506 76 aa9.64□□□□□ -0.87
TGFB1-202ENST00000597453 XCL1P47992 114 aa9.64□□□□□ -0.87
TGFB1-202ENST00000597453 ORMDL2Q53FV1 153 aa9.64□□□□□ -0.87
TGFB1-202ENST00000597453 RNASE13Q5GAN3 156 aaKnown RBP9.64□□□□□ -0.87
TGFB1-202ENST00000597453 VAMP8Q9BV40 100 aa9.64□□□□□ -0.87
TGFB1-202ENST00000597453 AP5S1Q9NUS5 200 aa9.64□□□□□ -0.87
TGFB1-202ENST00000597453 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.63□□□□□ -0.87
TGFB1-202ENST00000597453 C20orf202A1L168 122 aa9.63□□□□□ -0.87
TGFB1-202ENST00000597453 IFI27P40305 119 aaPredicted RBP9.63□□□□□ -0.87
TGFB1-202ENST00000597453 PMCHL1Q16048 86 aa9.63□□□□□ -0.87
TGFB1-202ENST00000597453 CFAP161Q6P656 301 aa9.63□□□□□ -0.87
TGFB1-202ENST00000597453 FAM104AQ969W3 186 aa9.63□□□□□ -0.87
TGFB1-202ENST00000597453 MIEN1Q9BRT3 115 aa9.63□□□□□ -0.87
TGFB1-202ENST00000597453 PYGO1Q9Y3Y4 419 aa9.63□□□□□ -0.87
TGFB1-202ENST00000597453 A0A087WYN8 130 aa9.62□□□□□ -0.87
TGFB1-202ENST00000597453 CD164L2Q6UWJ8 174 aa9.62□□□□□ -0.87
TGFB1-202ENST00000597453 SPACA4Q8TDM5 124 aa9.62□□□□□ -0.87
TGFB1-202ENST00000597453 CYSLTR1Q9Y271 337 aa9.62□□□□□ -0.87
TGFB1-202ENST00000597453 TNXBP22105 4242 aa9.61□□□□□ -0.87
TGFB1-202ENST00000597453 TRAV13-1A0A0B4J241 112 aa9.61□□□□□ -0.87
TGFB1-202ENST00000597453 M0R143 59 aa9.61□□□□□ -0.87
TGFB1-202ENST00000597453 C3orf79P0CE67 100 aa9.61□□□□□ -0.87
TGFB1-202ENST00000597453 KRTDAPP60985 99 aa9.61□□□□□ -0.87
TGFB1-202ENST00000597453 HIGD2BQ4VC39 106 aa9.61□□□□□ -0.87
TGFB1-202ENST00000597453 C2orf66Q6UXQ4 117 aa9.61□□□□□ -0.87
TGFB1-202ENST00000597453 LINC00469Q8N7U9 141 aa9.6□□□□□ -0.87
TGFB1-202ENST00000597453 OPRPNQ99935 248 aaPredicted RBP9.6□□□□□ -0.87
TGFB1-202ENST00000597453 IGLV4-3A0A075B6K6 122 aa9.59□□□□□ -0.87
TGFB1-202ENST00000597453 GVQW2A0A096LPI5 108 aaPredicted RBP9.59□□□□□ -0.87
TGFB1-202ENST00000597453 NPSP0C0P6 89 aa9.59□□□□□ -0.87
TGFB1-202ENST00000597453 G0S2P27469 103 aa9.59□□□□□ -0.87
TGFB1-202ENST00000597453 PRSS3P2Q8NHM4 247 aa9.59□□□□□ -0.87
TGFB1-202ENST00000597453 DPH3Q96FX2 82 aa9.59□□□□□ -0.87
TGFB1-202ENST00000597453 TMEM141Q96I45 108 aa9.59□□□□□ -0.87
TGFB1-202ENST00000597453 IGHV1-58A0A0C4DH39 117 aa9.58□□□□□ -0.88
TGFB1-202ENST00000597453 LINC01546A6NGU7 62 aa9.58□□□□□ -0.88
TGFB1-202ENST00000597453 MT1HL1P0DM35 61 aa9.58□□□□□ -0.88
TGFB1-202ENST00000597453 COX6A2Q02221 97 aa9.58□□□□□ -0.88
TGFB1-202ENST00000597453 URB1-AS1Q96HZ7 61 aa9.58□□□□□ -0.88
TGFB1-202ENST00000597453 PLAC8Q9NZF1 115 aa9.58□□□□□ -0.88
TGFB1-202ENST00000597453 PLA2G2DQ9UNK4 145 aa9.58□□□□□ -0.88
TGFB1-202ENST00000597453 IGIPA6NJ69 53 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms