RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 IGLV4-69A0A075B6H9 119 aa5.26□□□□□ -1.57
SMAD4-215ENST00000592911 F8WDY8 70 aa5.26□□□□□ -1.57
SMAD4-215ENST00000592911 APOMO95445 188 aa5.26□□□□□ -1.57
SMAD4-215ENST00000592911 NTF3P20783 257 aa5.26□□□□□ -1.57
SMAD4-215ENST00000592911 CAMPP49913 170 aa5.26□□□□□ -1.57
SMAD4-215ENST00000592911 CEBPGP53567 150 aa5.26□□□□□ -1.57
SMAD4-215ENST00000592911 PRR4Q16378 134 aa5.26□□□□□ -1.57
SMAD4-215ENST00000592911 TMEM241Q24JQ0 296 aa5.26□□□□□ -1.57
SMAD4-215ENST00000592911 C1orf137Q5JT78 98 aa5.26□□□□□ -1.57
SMAD4-215ENST00000592911 CST9LP1Q5W188 147 aa5.26□□□□□ -1.57
SMAD4-215ENST00000592911 PRR26Q8N8Z3 221 aa5.26□□□□□ -1.57
SMAD4-215ENST00000592911 BTF3L4Q96K17 158 aa5.26□□□□□ -1.57
SMAD4-215ENST00000592911 C2orf48Q96LS8 159 aa5.26□□□□□ -1.57
SMAD4-215ENST00000592911 IFITM10A6NMD0 228 aa5.25□□□□□ -1.57
SMAD4-215ENST00000592911 APCSP02743 223 aa5.25□□□□□ -1.57
SMAD4-215ENST00000592911 PPBPP02775 128 aa5.25□□□□□ -1.57
SMAD4-215ENST00000592911 UBE2D1P51668 147 aa5.25□□□□□ -1.57
SMAD4-215ENST00000592911 SS18Q15532 418 aa5.25□□□□□ -1.57
SMAD4-215ENST00000592911 TMEM101Q96IK0 257 aa5.25□□□□□ -1.57
SMAD4-215ENST00000592911 PACRGQ96M98 296 aaPredicted RBP5.25□□□□□ -1.57
SMAD4-215ENST00000592911 YPEL4Q96NS1 127 aa5.25□□□□□ -1.57
SMAD4-215ENST00000592911 CNFNQ9BYD5 112 aa5.25□□□□□ -1.57
SMAD4-215ENST00000592911 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
SMAD4-215ENST00000592911 LINC00959A0A1B0GUT2 108 aa5.24□□□□□ -1.57
SMAD4-215ENST00000592911 ESDP10768 282 aa5.24□□□□□ -1.57
SMAD4-215ENST00000592911 C9orf116Q5BN46 136 aaPredicted RBP5.24□□□□□ -1.57
SMAD4-215ENST00000592911 COA6Q5JTJ3 125 aaKnown RBP5.24□□□□□ -1.57
SMAD4-215ENST00000592911 COL5A1-AS1Q5SY13 56 aa5.24□□□□□ -1.57
SMAD4-215ENST00000592911 LCE5AQ5TCM9 118 aa5.24□□□□□ -1.57
SMAD4-215ENST00000592911 RPL7L1Q6DKI1 246 aaKnown RBP5.24□□□□□ -1.57
SMAD4-215ENST00000592911 RNASEKQ6P5S7 137 aaKnown RBP5.24□□□□□ -1.57
SMAD4-215ENST00000592911 NUP35Q8NFH5 326 aa5.24□□□□□ -1.57
SMAD4-215ENST00000592911 SNHG12Q9BXW3 62 aa5.24□□□□□ -1.57
SMAD4-215ENST00000592911 PRO1933Q9H354 126 aa5.24□□□□□ -1.57
SMAD4-215ENST00000592911 TMEM242Q9NWH2 141 aa5.24□□□□□ -1.57
SMAD4-215ENST00000592911 IGKV3OR2-268A0A0C4DH90 116 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 MUC21A0A140T8X8 626 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 A0A1W2PNN7 141 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 C20orf202A1L168 122 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 UMAD1C9J7I0 102 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 HIST1H2BKO60814 126 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 HIST1H2BJP06899 126 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 KRTAP1-4P0C5Y4 121 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 HIST1H2BOP23527 126 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 HIST1H2BBP33778 126 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 XCL1P47992 114 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 HIST1H2BDP58876 126 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 HIST1H2BCP62807 126 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 SMAGPQ0VAQ4 97 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 GAGE2BQ13066 116 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 HIST2H2BEQ16778 126 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.23□□□□□ -1.57
SMAD4-215ENST00000592911 PET117Q6UWS5 81 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 ORAOV1Q8WV07 137 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 HIST1H2BHQ93079 126 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 HIST1H2BNQ99877 126 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 HIST1H2BMQ99879 126 aa5.23□□□□□ -1.57
SMAD4-215ENST00000592911 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.22□□□□□ -1.57
SMAD4-215ENST00000592911 PAGE4O60829 102 aa5.22□□□□□ -1.57
SMAD4-215ENST00000592911 FABP4P15090 132 aa5.22□□□□□ -1.57
SMAD4-215ENST00000592911 CTRLP40313 264 aa5.22□□□□□ -1.57
SMAD4-215ENST00000592911 MEF2BQ02080 365 aaPredicted RBP5.22□□□□□ -1.57
SMAD4-215ENST00000592911 MBD3L1Q8WWY6 194 aa5.22□□□□□ -1.57
SMAD4-215ENST00000592911 C11orf52Q96A22 123 aa5.22□□□□□ -1.57
SMAD4-215ENST00000592911 TMEM18Q96B42 140 aa5.22□□□□□ -1.57
SMAD4-215ENST00000592911 IMMP2LQ96T52 175 aa5.22□□□□□ -1.57
SMAD4-215ENST00000592911 HIST1H2BLQ99880 126 aa5.22□□□□□ -1.57
SMAD4-215ENST00000592911 CYTL1Q9NRR1 136 aa5.22□□□□□ -1.57
SMAD4-215ENST00000592911 CSDC2Q9Y534 153 aaKnown RBP5.22□□□□□ -1.57
SMAD4-215ENST00000592911 TRBV6-5A0A0K0K1A5 114 aa5.21□□□□□ -1.58
SMAD4-215ENST00000592911 C19orf71A6NCJ1 209 aa5.21□□□□□ -1.58
SMAD4-215ENST00000592911 I3L3M4 83 aa5.21□□□□□ -1.58
SMAD4-215ENST00000592911 NPSP0C0P6 89 aa5.21□□□□□ -1.58
SMAD4-215ENST00000592911 TLX1NBP0CAT3 122 aa5.21□□□□□ -1.58
SMAD4-215ENST00000592911 MRAP2Q96G30 205 aa5.21□□□□□ -1.58
SMAD4-215ENST00000592911 CAMK2N2Q96S95 79 aa5.21□□□□□ -1.58
SMAD4-215ENST00000592911 CDC42SE2Q9NRR3 84 aa5.21□□□□□ -1.58
SMAD4-215ENST00000592911 MRPL35Q9NZE8 188 aaKnown RBP5.21□□□□□ -1.58
SMAD4-215ENST00000592911 COX7A2LO14548 114 aa5.2□□□□□ -1.58
SMAD4-215ENST00000592911 IFNA1P01562 189 aa5.2□□□□□ -1.58
SMAD4-215ENST00000592911 MALP21145 153 aa5.2□□□□□ -1.58
SMAD4-215ENST00000592911 PNRC1Q12796 327 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-215ENST00000592911 GATD1Q8NB37 220 aa5.2□□□□□ -1.58
SMAD4-215ENST00000592911 MIEN1Q9BRT3 115 aa5.2□□□□□ -1.58
SMAD4-215ENST00000592911 TPPP3Q9BW30 176 aa5.2□□□□□ -1.58
SMAD4-215ENST00000592911 CTDSP1Q9GZU7 261 aa5.2□□□□□ -1.58
SMAD4-215ENST00000592911 TRBV24-1A0A075B6N3 115 aa5.19□□□□□ -1.58
SMAD4-215ENST00000592911 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.19□□□□□ -1.58
SMAD4-215ENST00000592911 A0A087WZ39 114 aa5.19□□□□□ -1.58
SMAD4-215ENST00000592911 IGKV2-29A2NJV5 120 aaPredicted RBP5.19□□□□□ -1.58
SMAD4-215ENST00000592911 SDHAF1A6NFY7 115 aa5.19□□□□□ -1.58
SMAD4-215ENST00000592911 BCL2P10415 239 aa5.19□□□□□ -1.58
SMAD4-215ENST00000592911 RPL18AQ02543 176 aaKnown RBP5.19□□□□□ -1.58
SMAD4-215ENST00000592911 LYZL1Q6UWQ5 148 aa5.19□□□□□ -1.58
SMAD4-215ENST00000592911 PHF5AQ7RTV0 110 aaKnown RBP5.19□□□□□ -1.58
SMAD4-215ENST00000592911 MANBALQ9NQG1 85 aa5.19□□□□□ -1.58
SMAD4-215ENST00000592911 TMEM238C9JI98 176 aa5.18□□□□□ -1.58
SMAD4-215ENST00000592911 TAGLN2P37802 199 aaKnown RBP5.18□□□□□ -1.58
SMAD4-215ENST00000592911 CCL20P78556 96 aa5.18□□□□□ -1.58
SMAD4-215ENST00000592911 LINC00526Q96FQ7 95 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms