RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 NDUFC2-KCTD14E9PQ53 114 aa9.54□□□□□ -0.88
PCDHGB3-201ENST00000576222 BPY2O14599 106 aa9.54□□□□□ -0.88
PCDHGB3-201ENST00000576222 SNURFQ9Y675 71 aa9.54□□□□□ -0.88
PCDHGB3-201ENST00000576222 C19orf84I3L1E1 186 aa9.53□□□□□ -0.88
PCDHGB3-201ENST00000576222 CHCHD10Q8WYQ3 142 aaPredicted RBP9.53□□□□□ -0.88
PCDHGB3-201ENST00000576222 UBE2BP63146 152 aa9.52□□□□□ -0.89
PCDHGB3-201ENST00000576222 MP68P56378 58 aa9.52□□□□□ -0.89
PCDHGB3-201ENST00000576222 LINC00315P59091 139 aa9.52□□□□□ -0.89
PCDHGB3-201ENST00000576222 REG3AQ06141 175 aa9.52□□□□□ -0.89
PCDHGB3-201ENST00000576222 SPART-AS1P0CW21 52 aa9.52□□□□□ -0.89
PCDHGB3-201ENST00000576222 CCKP06307 115 aa9.51□□□□□ -0.89
PCDHGB3-201ENST00000576222 HIVEP2P31629 2446 aa9.51□□□□□ -0.89
PCDHGB3-201ENST00000576222 TLN2Q9Y4G6 2542 aa9.51□□□□□ -0.89
PCDHGB3-201ENST00000576222 DEFB4AO15263 64 aa9.51□□□□□ -0.89
PCDHGB3-201ENST00000576222 PSCAO43653 123 aa9.51□□□□□ -0.89
PCDHGB3-201ENST00000576222 USP9YO00507 2555 aaPredicted RBP9.51□□□□□ -0.89
PCDHGB3-201ENST00000576222 SETD2Q9BYW2 2564 aaPredicted RBP9.51□□□□□ -0.89
PCDHGB3-201ENST00000576222 NDUFC1O43677 76 aa9.51□□□□□ -0.89
PCDHGB3-201ENST00000576222 PRO3102Q9H379 93 aa9.51□□□□□ -0.89
PCDHGB3-201ENST00000576222 A0A0U1RQV1 116 aa9.5□□□□□ -0.89
PCDHGB3-201ENST00000576222 A0A087WYN8 130 aa9.5□□□□□ -0.89
PCDHGB3-201ENST00000576222 Q6ZQY7 126 aa9.5□□□□□ -0.89
PCDHGB3-201ENST00000576222 ABCA2Q9BZC7 2435 aa9.5□□□□□ -0.89
PCDHGB3-201ENST00000576222 LOC100131303A0A0U1RQF7 123 aa9.5□□□□□ -0.89
PCDHGB3-201ENST00000576222 Q6YL49 198 aa9.5□□□□□ -0.89
PCDHGB3-201ENST00000576222 CSDC2Q9Y534 153 aaKnown RBP9.5□□□□□ -0.89
PCDHGB3-201ENST00000576222 CDSNQ15517 529 aa9.49□□□□□ -0.89
PCDHGB3-201ENST00000576222 PRORYQ9H606 182 aa9.49□□□□□ -0.89
PCDHGB3-201ENST00000576222 CEP295Q9C0D2 2601 aa9.49□□□□□ -0.89
PCDHGB3-201ENST00000576222 DEFB113Q30KQ7 82 aa9.49□□□□□ -0.89
PCDHGB3-201ENST00000576222 WFDC11Q8NEX6 87 aa9.49□□□□□ -0.89
PCDHGB3-201ENST00000576222 LINC00959A0A1B0GUT2 108 aa9.49□□□□□ -0.89
PCDHGB3-201ENST00000576222 NCOR2Q9Y618 2525 aa9.48□□□□□ -0.89
PCDHGB3-201ENST00000576222 DEFB135Q30KP9 77 aa9.48□□□□□ -0.89
PCDHGB3-201ENST00000576222 ATP5EP56381 51 aaPredicted RBP9.47□□□□□ -0.89
PCDHGB3-201ENST00000576222 FN1P02751 2386 aaKnown RBP9.47□□□□□ -0.89
PCDHGB3-201ENST00000576222 LINC00846Q9NV44 126 aa9.47□□□□□ -0.89
PCDHGB3-201ENST00000576222 XAGE1AQ9HD64 81 aa9.47□□□□□ -0.89
PCDHGB3-201ENST00000576222 SMIM26A0A096LP01 95 aa9.46□□□□□ -0.89
PCDHGB3-201ENST00000576222 TRAV7A0A075B6U4 112 aa9.46□□□□□ -0.89
PCDHGB3-201ENST00000576222 Q6ZSN1 163 aa9.46□□□□□ -0.89
PCDHGB3-201ENST00000576222 BRI3O95415 125 aa9.46□□□□□ -0.9
PCDHGB3-201ENST00000576222 FHL3Q13643 280 aa9.45□□□□□ -0.9
PCDHGB3-201ENST00000576222 NTM-AS1Q6ZSK4 140 aa9.45□□□□□ -0.9
PCDHGB3-201ENST00000576222 C18orf65Q6ZTR6 163 aa9.45□□□□□ -0.9
PCDHGB3-201ENST00000576222 UBE2DNLQ8IWF7 75 aa9.45□□□□□ -0.9
PCDHGB3-201ENST00000576222 RMI2Q96E14 147 aa9.45□□□□□ -0.9
PCDHGB3-201ENST00000576222 CD164L2Q6UWJ8 174 aa9.44□□□□□ -0.9
PCDHGB3-201ENST00000576222 ZNF702PQ9H963 129 aa9.44□□□□□ -0.9
PCDHGB3-201ENST00000576222 C9orf66Q5T8R8 295 aa9.44□□□□□ -0.9
PCDHGB3-201ENST00000576222 SERP1Q9Y6X1 66 aa9.44□□□□□ -0.9
PCDHGB3-201ENST00000576222 Q8IZM0 81 aa9.44□□□□□ -0.9
PCDHGB3-201ENST00000576222 Q8N814 137 aa9.44□□□□□ -0.9
PCDHGB3-201ENST00000576222 Q8N2B8 174 aa9.43□□□□□ -0.9
PCDHGB3-201ENST00000576222 FAM19A4Q96LR4 140 aa9.43□□□□□ -0.9
PCDHGB3-201ENST00000576222 LINC00337Q8N6G1 96 aa9.42□□□□□ -0.9
PCDHGB3-201ENST00000576222 FAM19A3Q7Z5A8 133 aa9.42□□□□□ -0.9
PCDHGB3-201ENST00000576222 A0A087WZ39 114 aa9.42□□□□□ -0.9
PCDHGB3-201ENST00000576222 CRYGAP11844 174 aa9.42□□□□□ -0.9
PCDHGB3-201ENST00000576222 ANKRD11Q6UB99 2663 aaPredicted RBP9.41□□□□□ -0.9
PCDHGB3-201ENST00000576222 AVPP01185 164 aa9.41□□□□□ -0.9
PCDHGB3-201ENST00000576222 FAM19A1Q7Z5A9 133 aa9.41□□□□□ -0.9
PCDHGB3-201ENST00000576222 DNAJC9-AS1A6NH13 148 aa9.41□□□□□ -0.9
PCDHGB3-201ENST00000576222 IGLV5-39A0A0G2JS06 123 aa9.41□□□□□ -0.9
PCDHGB3-201ENST00000576222 COX17Q14061 63 aa9.41□□□□□ -0.9
PCDHGB3-201ENST00000576222 BEAN1Q3B7T3 259 aa9.41□□□□□ -0.9
PCDHGB3-201ENST00000576222 V9GYY9 64 aa9.41□□□□□ -0.9
PCDHGB3-201ENST00000576222 MIFP14174 115 aa9.4□□□□□ -0.9
PCDHGB3-201ENST00000576222 BBC3Q96PG8 261 aaPredicted RBP9.4□□□□□ -0.9
PCDHGB3-201ENST00000576222 PRR3P79522 188 aaKnown RBP9.4□□□□□ -0.9
PCDHGB3-201ENST00000576222 IGLV4-60A0A075B6I1 120 aa9.4□□□□□ -0.91
PCDHGB3-201ENST00000576222 A0A1W2PPR1 153 aa9.4□□□□□ -0.91
PCDHGB3-201ENST00000576222 C3orf84H3BNL1 204 aa9.39□□□□□ -0.91
PCDHGB3-201ENST00000576222 ODF3L2Q3SX64 289 aa9.39□□□□□ -0.91
PCDHGB3-201ENST00000576222 LYRM9A8MSI8 78 aa9.39□□□□□ -0.91
PCDHGB3-201ENST00000576222 IGHV4-31P0DP07 118 aa9.39□□□□□ -0.91
PCDHGB3-201ENST00000576222 DEFB121Q5J5C9 76 aa9.39□□□□□ -0.91
PCDHGB3-201ENST00000576222 WFDC10AQ9H1F0 79 aa9.39□□□□□ -0.91
PCDHGB3-201ENST00000576222 NDUFS5O43920 106 aa9.38□□□□□ -0.91
PCDHGB3-201ENST00000576222 NHLRC4P0CG21 123 aaPredicted RBP9.38□□□□□ -0.91
PCDHGB3-201ENST00000576222 HILS1P60008 231 aa9.38□□□□□ -0.91
PCDHGB3-201ENST00000576222 C1orf158Q8N1D5 194 aa9.37□□□□□ -0.91
PCDHGB3-201ENST00000576222 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.37□□□□□ -0.91
PCDHGB3-201ENST00000576222 PKD1L2Q7Z442 2459 aa9.37□□□□□ -0.91
PCDHGB3-201ENST00000576222 RPS28P62857 69 aaKnown RBP9.36□□□□□ -0.91
PCDHGB3-201ENST00000576222 ABCA12Q86UK0 2595 aa9.36□□□□□ -0.91
PCDHGB3-201ENST00000576222 NDUFB1O75438 58 aa9.36□□□□□ -0.91
PCDHGB3-201ENST00000576222 Q8N3U1 123 aa9.36□□□□□ -0.91
PCDHGB3-201ENST00000576222 C5orf42Q9H799 3197 aa9.35□□□□□ -0.91
PCDHGB3-201ENST00000576222 ZNF73O43830 326 aaPredicted RBP9.35□□□□□ -0.91
PCDHGB3-201ENST00000576222 C1orf195Q5TG92 126 aa9.35□□□□□ -0.91
PCDHGB3-201ENST00000576222 SOSTDC1Q6X4U4 206 aa9.35□□□□□ -0.91
PCDHGB3-201ENST00000576222 FAM218AQ96MZ4 157 aa9.35□□□□□ -0.91
PCDHGB3-201ENST00000576222 C9orf116Q5BN46 136 aaPredicted RBP9.34□□□□□ -0.91
PCDHGB3-201ENST00000576222 CHD7Q9P2D1 2997 aa9.34□□□□□ -0.91
PCDHGB3-201ENST00000576222 MUC7Q8TAX7 377 aa9.34□□□□□ -0.91
PCDHGB3-201ENST00000576222 LITAFQ99732 161 aa9.34□□□□□ -0.91
PCDHGB3-201ENST00000576222 IGLV5-45A0A087WSX0 123 aa9.33□□□□□ -0.92
PCDHGB3-201ENST00000576222 UNQ6190/PRO20217Q6UXQ8 127 aa9.33□□□□□ -0.92
PCDHGB3-201ENST00000576222 SPTSSBQ8NFR3 76 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms