RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 TRAV13-1A0A0B4J241 112 aa6.56□□□□□ -1.36
LINC00564-201ENST00000567258 A0A1B0GVG6 124 aa6.56□□□□□ -1.36
LINC00564-201ENST00000567258 HBBP68871 147 aa6.56□□□□□ -1.36
LINC00564-201ENST00000567258 NRACQ8N912 160 aa6.56□□□□□ -1.36
LINC00564-201ENST00000567258 UBE2D4Q9Y2X8 147 aa6.56□□□□□ -1.36
LINC00564-201ENST00000567258 A0A096LNI7 61 aa6.55□□□□□ -1.36
LINC00564-201ENST00000567258 TNFRSF6BO95407 300 aa6.55□□□□□ -1.36
LINC00564-201ENST00000567258 RAB5AP20339 215 aa6.55□□□□□ -1.36
LINC00564-201ENST00000567258 HNRNPA3P51991 378 aaKnown RBP6.55□□□□□ -1.36
LINC00564-201ENST00000567258 MRPL54Q6P161 138 aaKnown RBP6.55□□□□□ -1.36
LINC00564-201ENST00000567258 LINC00526Q96FQ7 95 aa6.55□□□□□ -1.36
LINC00564-201ENST00000567258 CAMK2N2Q96S95 79 aa6.55□□□□□ -1.36
LINC00564-201ENST00000567258 TIMM21Q9BVV7 248 aa6.55□□□□□ -1.36
LINC00564-201ENST00000567258 IGLV4-69A0A075B6H9 119 aa6.54□□□□□ -1.36
LINC00564-201ENST00000567258 TRBV24-1A0A075B6N3 115 aa6.54□□□□□ -1.36
LINC00564-201ENST00000567258 LOC107984640A0A0U1RRK4 108 aa6.54□□□□□ -1.36
LINC00564-201ENST00000567258 D6R8Y8 96 aa6.54□□□□□ -1.36
LINC00564-201ENST00000567258 PPBPP02775 128 aa6.54□□□□□ -1.36
LINC00564-201ENST00000567258 RPL32P62910 135 aaKnown RBP6.54□□□□□ -1.36
LINC00564-201ENST00000567258 RNASE13Q5GAN3 156 aaKnown RBP6.54□□□□□ -1.36
LINC00564-201ENST00000567258 C9JQL5 133 aa6.53□□□□□ -1.36
LINC00564-201ENST00000567258 RAB14P61106 215 aa6.53□□□□□ -1.36
LINC00564-201ENST00000567258 SMIM2Q9BVW6 85 aa6.53□□□□□ -1.36
LINC00564-201ENST00000567258 SPANXA1Q9NS26 97 aa6.53□□□□□ -1.36
LINC00564-201ENST00000567258 GAGE2BQ13066 116 aa6.52□□□□□ -1.37
LINC00564-201ENST00000567258 Q6ZUT4 128 aa6.52□□□□□ -1.37
LINC00564-201ENST00000567258 ATP5L2Q7Z4Y8 100 aa6.52□□□□□ -1.37
LINC00564-201ENST00000567258 C5orf38Q86SI9 138 aa6.52□□□□□ -1.37
LINC00564-201ENST00000567258 ORMDL3Q8N138 153 aa6.52□□□□□ -1.37
LINC00564-201ENST00000567258 IFITM10A6NMD0 228 aa6.51□□□□□ -1.37
LINC00564-201ENST00000567258 IFI27P40305 119 aaPredicted RBP6.51□□□□□ -1.37
LINC00564-201ENST00000567258 PTTG1IPP53801 180 aa6.51□□□□□ -1.37
LINC00564-201ENST00000567258 RPL39P62891 51 aaKnown RBP6.51□□□□□ -1.37
LINC00564-201ENST00000567258 RPL18AQ02543 176 aaKnown RBP6.51□□□□□ -1.37
LINC00564-201ENST00000567258 TMEM136Q6ZRR5 245 aa6.51□□□□□ -1.37
LINC00564-201ENST00000567258 OR10D4PQ8NGN7 298 aa6.51□□□□□ -1.37
LINC00564-201ENST00000567258 C2orf48Q96LS8 159 aa6.51□□□□□ -1.37
LINC00564-201ENST00000567258 TGIF2-C20orf24A0A0A6YYL0 155 aa6.5□□□□□ -1.37
LINC00564-201ENST00000567258 NPYP01303 97 aa6.5□□□□□ -1.37
LINC00564-201ENST00000567258 MT-ND4LP03901 98 aa6.5□□□□□ -1.37
LINC00564-201ENST00000567258 PRR3P79522 188 aaKnown RBP6.5□□□□□ -1.37
LINC00564-201ENST00000567258 SPAG11BQ08648 103 aa6.5□□□□□ -1.37
LINC00564-201ENST00000567258 PNRC1Q12796 327 aaPredicted RBP6.5□□□□□ -1.37
LINC00564-201ENST00000567258 REG3GQ6UW15 175 aa6.5□□□□□ -1.37
LINC00564-201ENST00000567258 Q6ZRP5 223 aa6.5□□□□□ -1.37
LINC00564-201ENST00000567258 ORAOV1Q8WV07 137 aa6.5□□□□□ -1.37
LINC00564-201ENST00000567258 PRELID3AQ96N28 172 aa6.5□□□□□ -1.37
LINC00564-201ENST00000567258 A0A1B0GXF2 115 aa6.49□□□□□ -1.37
LINC00564-201ENST00000567258 F8WDY8 70 aa6.49□□□□□ -1.37
LINC00564-201ENST00000567258 NDUFA1O15239 70 aa6.49□□□□□ -1.37
LINC00564-201ENST00000567258 MRPS36P82909 103 aaKnown RBP6.49□□□□□ -1.37
LINC00564-201ENST00000567258 ANAPC16Q96DE5 110 aa6.49□□□□□ -1.37
LINC00564-201ENST00000567258 IMMP2LQ96T52 175 aa6.49□□□□□ -1.37
LINC00564-201ENST00000567258 RNF151Q2KHN1 245 aa6.48□□□□□ -1.37
LINC00564-201ENST00000567258 SPINK6Q6UWN8 80 aa6.48□□□□□ -1.37
LINC00564-201ENST00000567258 MAP1LC3AQ9H492 121 aa6.48□□□□□ -1.37
LINC00564-201ENST00000567258 LAMTOR2Q9Y2Q5 125 aa6.48□□□□□ -1.37
LINC00564-201ENST00000567258 LRP1Q07954 4544 aaKnown RBP6.47□□□□□ -1.37
LINC00564-201ENST00000567258 LOC389332A0A1B0GUA5 103 aa6.47□□□□□ -1.37
LINC00564-201ENST00000567258 Q6ZN92 141 aa6.47□□□□□ -1.37
LINC00564-201ENST00000567258 TEX43Q6ZNM6 134 aa6.47□□□□□ -1.37
LINC00564-201ENST00000567258 OPRPNQ99935 248 aaPredicted RBP6.47□□□□□ -1.37
LINC00564-201ENST00000567258 C2orf88Q9BSF0 95 aa6.47□□□□□ -1.37
LINC00564-201ENST00000567258 MT-ND6P03923 174 aa6.46□□□□□ -1.38
LINC00564-201ENST00000567258 TMEM141Q96I45 108 aa6.46□□□□□ -1.38
LINC00564-201ENST00000567258 MRPL35Q9NZE8 188 aaKnown RBP6.46□□□□□ -1.38
LINC00564-201ENST00000567258 PYGO1Q9Y3Y4 419 aa6.46□□□□□ -1.38
LINC00564-201ENST00000567258 IGHV3OR16-9A0A0B4J2B5 98 aa6.45□□□□□ -1.38
LINC00564-201ENST00000567258 A0A0J9YXV3 536 aa6.45□□□□□ -1.38
LINC00564-201ENST00000567258 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.45□□□□□ -1.38
LINC00564-201ENST00000567258 G0S2P27469 103 aa6.45□□□□□ -1.38
LINC00564-201ENST00000567258 ORMDL2Q53FV1 153 aa6.45□□□□□ -1.38
LINC00564-201ENST00000567258 C9orf116Q5BN46 136 aaPredicted RBP6.45□□□□□ -1.38
LINC00564-201ENST00000567258 LINC01600Q96MT4 127 aa6.45□□□□□ -1.38
LINC00564-201ENST00000567258 CTDSP1Q9GZU7 261 aa6.45□□□□□ -1.38
LINC00564-201ENST00000567258 CYSLTR1Q9Y271 337 aa6.45□□□□□ -1.38
LINC00564-201ENST00000567258 PKHD1L1Q86WI1 4243 aa6.45□□□□□ -1.38
LINC00564-201ENST00000567258 PRSS47A8MTI9 375 aa6.44□□□□□ -1.38
LINC00564-201ENST00000567258 MT1HL1P0DM35 61 aa6.44□□□□□ -1.38
LINC00564-201ENST00000567258 Q8N8P6 123 aa6.44□□□□□ -1.38
LINC00564-201ENST00000567258 PACRGQ96M98 296 aaPredicted RBP6.44□□□□□ -1.38
LINC00564-201ENST00000567258 VCX2Q9H322 139 aa6.44□□□□□ -1.38
LINC00564-201ENST00000567258 IGLV4-3A0A075B6K6 122 aa6.43□□□□□ -1.38
LINC00564-201ENST00000567258 A0A087WZ39 114 aa6.43□□□□□ -1.38
LINC00564-201ENST00000567258 A0A1W2PNN7 141 aa6.43□□□□□ -1.38
LINC00564-201ENST00000567258 K7EMI3 77 aa6.43□□□□□ -1.38
LINC00564-201ENST00000567258 PRSS2P07478 247 aa6.43□□□□□ -1.38
LINC00564-201ENST00000567258 PAPPA-AS1Q5QFB9 102 aa6.43□□□□□ -1.38
LINC00564-201ENST00000567258 C2orf66Q6UXQ4 117 aa6.43□□□□□ -1.38
LINC00564-201ENST00000567258 NXT2Q9NPJ8 142 aaKnown RBP6.43□□□□□ -1.38
LINC00564-201ENST00000567258 FAT3Q8TDW7 4589 aa6.42□□□□□ -1.38
LINC00564-201ENST00000567258 GAGE2EQ4V326 116 aa6.42□□□□□ -1.38
LINC00564-201ENST00000567258 C1orf137Q5JT78 98 aa6.42□□□□□ -1.38
LINC00564-201ENST00000567258 LINC00242Q5T6M2 205 aa6.42□□□□□ -1.38
LINC00564-201ENST00000567258 UNQ6190/PRO20217Q6UXQ8 127 aa6.42□□□□□ -1.38
LINC00564-201ENST00000567258 FAM104AQ969W3 186 aa6.42□□□□□ -1.38
LINC00564-201ENST00000567258 GAGE2DQ9UEU5 116 aa6.42□□□□□ -1.38
LINC00564-201ENST00000567258 TRBV30A0A0K0K1B3 111 aa6.41□□□□□ -1.38
LINC00564-201ENST00000567258 NPSP0C0P6 89 aa6.41□□□□□ -1.38
LINC00564-201ENST00000567258 TLX1NBP0CAT3 122 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms