RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 ORAOV1Q8WV07 137 aa5.94□□□□□ -1.46
CLN6-203ENST00000563917 SMIM2Q9BVW6 85 aa5.94□□□□□ -1.46
CLN6-203ENST00000563917 D6R8Y8 96 aa5.93□□□□□ -1.46
CLN6-203ENST00000563917 IFI27P40305 119 aaPredicted RBP5.93□□□□□ -1.46
CLN6-203ENST00000563917 MRPL54Q6P161 138 aaKnown RBP5.93□□□□□ -1.46
CLN6-203ENST00000563917 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
CLN6-203ENST00000563917 A0A1W2PNN7 141 aa5.92□□□□□ -1.46
CLN6-203ENST00000563917 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.92□□□□□ -1.46
CLN6-203ENST00000563917 RPL39P62891 51 aaKnown RBP5.92□□□□□ -1.46
CLN6-203ENST00000563917 MRPS36P82909 103 aaKnown RBP5.92□□□□□ -1.46
CLN6-203ENST00000563917 SRSF9Q13242 221 aaKnown RBP eCLIP5.92□□□□□ -1.46
CLN6-203ENST00000563917 C1orf137Q5JT78 98 aa5.92□□□□□ -1.46
CLN6-203ENST00000563917 ORMDL3Q8N138 153 aa5.92□□□□□ -1.46
CLN6-203ENST00000563917 OPRPNQ99935 248 aaPredicted RBP5.92□□□□□ -1.46
CLN6-203ENST00000563917 MRPL35Q9NZE8 188 aaKnown RBP5.92□□□□□ -1.46
CLN6-203ENST00000563917 TMEM136Q6ZRR5 245 aa5.91□□□□□ -1.46
CLN6-203ENST00000563917 A0A087WZ39 114 aa5.9□□□□□ -1.46
CLN6-203ENST00000563917 IGHV3OR16-9A0A0B4J2B5 98 aa5.9□□□□□ -1.46
CLN6-203ENST00000563917 NPYP01303 97 aa5.9□□□□□ -1.46
CLN6-203ENST00000563917 KRTAP10-8P60410 259 aa5.9□□□□□ -1.46
CLN6-203ENST00000563917 Q6ZN92 141 aa5.9□□□□□ -1.46
CLN6-203ENST00000563917 PHF5AQ7RTV0 110 aaKnown RBP5.9□□□□□ -1.46
CLN6-203ENST00000563917 ATP5L2Q7Z4Y8 100 aa5.9□□□□□ -1.46
CLN6-203ENST00000563917 PACRGQ96M98 296 aaPredicted RBP5.9□□□□□ -1.46
CLN6-203ENST00000563917 PRELID3AQ96N28 172 aa5.9□□□□□ -1.46
CLN6-203ENST00000563917 C2orf88Q9BSF0 95 aa5.9□□□□□ -1.46
CLN6-203ENST00000563917 PSORS1C2Q9UIG4 136 aa5.9□□□□□ -1.46
CLN6-203ENST00000563917 UBR4Q5T4S7 5183 aa5.89□□□□□ -1.47
CLN6-203ENST00000563917 C9JQL5 133 aa5.89□□□□□ -1.47
CLN6-203ENST00000563917 ODF1Q14990 250 aa5.89□□□□□ -1.47
CLN6-203ENST00000563917 GAGE2EQ4V326 116 aa5.89□□□□□ -1.47
CLN6-203ENST00000563917 TEX43Q6ZNM6 134 aa5.89□□□□□ -1.47
CLN6-203ENST00000563917 DIRC1Q969H9 104 aa5.89□□□□□ -1.47
CLN6-203ENST00000563917 MAP1LC3AQ9H492 121 aa5.89□□□□□ -1.47
CLN6-203ENST00000563917 GAGE2DQ9UEU5 116 aa5.89□□□□□ -1.47
CLN6-203ENST00000563917 A0A1B0GXF2 115 aa5.88□□□□□ -1.47
CLN6-203ENST00000563917 PRSS2P07478 247 aa5.88□□□□□ -1.47
CLN6-203ENST00000563917 UBE2BP63146 152 aa5.88□□□□□ -1.47
CLN6-203ENST00000563917 SRSF3P84103 164 aaKnown RBP5.88□□□□□ -1.47
CLN6-203ENST00000563917 UNQ6190/PRO20217Q6UXQ8 127 aa5.88□□□□□ -1.47
CLN6-203ENST00000563917 FAM19A5Q7Z5A7 132 aaPredicted RBP5.88□□□□□ -1.47
CLN6-203ENST00000563917 TMEM141Q96I45 108 aa5.88□□□□□ -1.47
CLN6-203ENST00000563917 LAMTOR2Q9Y2Q5 125 aa5.88□□□□□ -1.47
CLN6-203ENST00000563917 PYGO1Q9Y3Y4 419 aa5.88□□□□□ -1.47
CLN6-203ENST00000563917 TRBV30A0A0K0K1B3 111 aa5.87□□□□□ -1.47
CLN6-203ENST00000563917 LOC389332A0A1B0GUA5 103 aa5.87□□□□□ -1.47
CLN6-203ENST00000563917 MT-ND4LP03901 98 aa5.87□□□□□ -1.47
CLN6-203ENST00000563917 IGLV7-43P04211 117 aa5.87□□□□□ -1.47
CLN6-203ENST00000563917 TLX1NBP0CAT3 122 aa5.87□□□□□ -1.47
CLN6-203ENST00000563917 VCX2Q9H322 139 aa5.87□□□□□ -1.47
CLN6-203ENST00000563917 CYSLTR1Q9Y271 337 aa5.87□□□□□ -1.47
CLN6-203ENST00000563917 IGLV4-3A0A075B6K6 122 aa5.86□□□□□ -1.47
CLN6-203ENST00000563917 G0S2P27469 103 aa5.86□□□□□ -1.47
CLN6-203ENST00000563917 CKS1BP61024 79 aa5.86□□□□□ -1.47
CLN6-203ENST00000563917 RAB14P61106 215 aa5.86□□□□□ -1.47
CLN6-203ENST00000563917 PNRC1Q12796 327 aaPredicted RBP5.86□□□□□ -1.47
CLN6-203ENST00000563917 ORMDL2Q53FV1 153 aa5.86□□□□□ -1.47
CLN6-203ENST00000563917 PAPPA-AS1Q5QFB9 102 aa5.86□□□□□ -1.47
CLN6-203ENST00000563917 ANAPC16Q96DE5 110 aa5.86□□□□□ -1.47
CLN6-203ENST00000563917 C6orf48Q9UBA6 75 aa5.86□□□□□ -1.47
CLN6-203ENST00000563917 NDUFC2-KCTD14E9PQ53 114 aa5.85□□□□□ -1.47
CLN6-203ENST00000563917 K7EMI3 77 aa5.85□□□□□ -1.47
CLN6-203ENST00000563917 M0QXV9 152 aa5.85□□□□□ -1.47
CLN6-203ENST00000563917 SEC11AP67812 179 aa5.85□□□□□ -1.47
CLN6-203ENST00000563917 C6orf226Q5I0X4 101 aa5.85□□□□□ -1.47
CLN6-203ENST00000563917 LINC00242Q5T6M2 205 aa5.85□□□□□ -1.47
CLN6-203ENST00000563917 C10orf25Q5T742 122 aa5.85□□□□□ -1.47
CLN6-203ENST00000563917 LINC01561Q8N1V8 128 aa5.85□□□□□ -1.47
CLN6-203ENST00000563917 TOMM7Q9P0U1 55 aa5.85□□□□□ -1.47
CLN6-203ENST00000563917 FAM168BA1KXE4 195 aa5.84□□□□□ -1.47
CLN6-203ENST00000563917 PRSS47A8MTI9 375 aa5.84□□□□□ -1.47
CLN6-203ENST00000563917 UBE2D1P51668 147 aa5.84□□□□□ -1.47
CLN6-203ENST00000563917 C2orf66Q6UXQ4 117 aa5.84□□□□□ -1.47
CLN6-203ENST00000563917 Q8N8P6 123 aa5.84□□□□□ -1.47
CLN6-203ENST00000563917 A0A1B0GVG6 124 aa5.83□□□□□ -1.48
CLN6-203ENST00000563917 H0Y9J4 135 aa5.83□□□□□ -1.48
CLN6-203ENST00000563917 NPSP0C0P6 89 aa5.83□□□□□ -1.48
CLN6-203ENST00000563917 C2orf82Q6UX34 121 aa5.83□□□□□ -1.48
CLN6-203ENST00000563917 FAM104AQ969W3 186 aa5.83□□□□□ -1.48
CLN6-203ENST00000563917 CTDSP1Q9GZU7 261 aa5.83□□□□□ -1.48
CLN6-203ENST00000563917 GEMIN7Q9H840 131 aaKnown RBP5.83□□□□□ -1.48
CLN6-203ENST00000563917 IGLV1-50A0A075B6I6 118 aa5.82□□□□□ -1.48
CLN6-203ENST00000563917 RPL13AP40429 203 aaKnown RBP5.82□□□□□ -1.48
CLN6-203ENST00000563917 HERVK_113P63121 156 aa5.82□□□□□ -1.48
CLN6-203ENST00000563917 KIAA0087Q14695 138 aa5.82□□□□□ -1.48
CLN6-203ENST00000563917 LBHQ53QV2 105 aaPredicted RBP5.82□□□□□ -1.48
CLN6-203ENST00000563917 PRR26Q8N8Z3 221 aa5.82□□□□□ -1.48
CLN6-203ENST00000563917 ALKBH7Q9BT30 221 aaPredicted RBP5.82□□□□□ -1.48
CLN6-203ENST00000563917 NXT2Q9NPJ8 142 aaKnown RBP5.82□□□□□ -1.48
CLN6-203ENST00000563917 Q8IZM0 81 aa5.8□□□□□ -1.48
CLN6-203ENST00000563917 AMELXQ99217 191 aa5.8□□□□□ -1.48
CLN6-203ENST00000563917 TNXBP22105 4242 aa5.79□□□□□ -1.48
CLN6-203ENST00000563917 LINC01549A6NIU2 74 aa5.79□□□□□ -1.48
CLN6-203ENST00000563917 NUPR1O60356 82 aa5.79□□□□□ -1.48
CLN6-203ENST00000563917 CXCL5P42830 114 aa5.79□□□□□ -1.48
CLN6-203ENST00000563917 C9orf129Q5T035 196 aaKnown RBP5.79□□□□□ -1.48
CLN6-203ENST00000563917 ZC2HC1BQ5TFG8 222 aa5.79□□□□□ -1.48
CLN6-203ENST00000563917 TIMM17AQ99595 171 aa5.79□□□□□ -1.48
CLN6-203ENST00000563917 IGIPA6NJ69 53 aa5.78□□□□□ -1.48
CLN6-203ENST00000563917 F8VRH5 84 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms