RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 MAST4O15021 2626 aa6.62□□□□□ -1.35
LINC00838-201ENST00000562956 LYRM9A8MSI8 78 aa6.62□□□□□ -1.35
LINC00838-201ENST00000562956 SBSPONQ8IVN8 264 aa6.62□□□□□ -1.35
LINC00838-201ENST00000562956 PPDPFLQ8WWR9 84 aa6.62□□□□□ -1.35
LINC00838-201ENST00000562956 ANK2Q01484 3957 aa6.61□□□□□ -1.35
LINC00838-201ENST00000562956 NHLRC4P0CG21 123 aaPredicted RBP6.61□□□□□ -1.35
LINC00838-201ENST00000562956 MIFP14174 115 aa6.61□□□□□ -1.35
LINC00838-201ENST00000562956 ZNF22P17026 224 aaPredicted RBP6.61□□□□□ -1.35
LINC00838-201ENST00000562956 TIMM21Q9BVV7 248 aa6.61□□□□□ -1.35
LINC00838-201ENST00000562956 CELA1Q9UNI1 258 aa6.61□□□□□ -1.35
LINC00838-201ENST00000562956 TSPEAR-AS2P59090 65 aa6.6□□□□□ -1.35
LINC00838-201ENST00000562956 HERVK_113P61574 105 aa6.6□□□□□ -1.35
LINC00838-201ENST00000562956 MRPS36P82909 103 aaKnown RBP6.6□□□□□ -1.35
LINC00838-201ENST00000562956 TAL2Q16559 108 aa6.6□□□□□ -1.35
LINC00838-201ENST00000562956 TEN1Q86WV5 123 aa6.6□□□□□ -1.35
LINC00838-201ENST00000562956 DGAT2L7PQ6IED9 249 aa6.6□□□□□ -1.35
LINC00838-201ENST00000562956 TMEM223A0PJW6 202 aa6.6□□□□□ -1.35
LINC00838-201ENST00000562956 GYPEP15421 78 aa6.6□□□□□ -1.35
LINC00838-201ENST00000562956 COL6A5A8TX70 2615 aa6.59□□□□□ -1.35
LINC00838-201ENST00000562956 IGHV3-64A0A075B6Q5 118 aa6.59□□□□□ -1.35
LINC00838-201ENST00000562956 C9JAW5 83 aa6.59□□□□□ -1.35
LINC00838-201ENST00000562956 GAGE2BQ13066 116 aa6.59□□□□□ -1.35
LINC00838-201ENST00000562956 GAGE2EQ4V326 116 aa6.59□□□□□ -1.35
LINC00838-201ENST00000562956 TMEM243Q9BU79 118 aa6.59□□□□□ -1.35
LINC00838-201ENST00000562956 GAGE2DQ9UEU5 116 aa6.59□□□□□ -1.35
LINC00838-201ENST00000562956 UBE2D1P51668 147 aa6.59□□□□□ -1.36
LINC00838-201ENST00000562956 DAD1P61803 113 aa6.59□□□□□ -1.36
LINC00838-201ENST00000562956 PRO0255Q9UI72 69 aa6.59□□□□□ -1.36
LINC00838-201ENST00000562956 CSDC2Q9Y534 153 aaKnown RBP6.59□□□□□ -1.36
LINC00838-201ENST00000562956 TTC32Q5I0X7 151 aa6.58□□□□□ -1.36
LINC00838-201ENST00000562956 ATP6V0E2Q8NHE4 81 aa6.58□□□□□ -1.36
LINC00838-201ENST00000562956 RETNQ9HD89 108 aa6.58□□□□□ -1.36
LINC00838-201ENST00000562956 TRBV6-8A0A0A6YYG3 113 aa6.58□□□□□ -1.36
LINC00838-201ENST00000562956 TINCRA0A1B0GVN0 87 aa6.58□□□□□ -1.36
LINC00838-201ENST00000562956 UBE2L6O14933 153 aa6.58□□□□□ -1.36
LINC00838-201ENST00000562956 SNCGO76070 127 aa6.58□□□□□ -1.36
LINC00838-201ENST00000562956 A8MZ25 164 aa6.57□□□□□ -1.36
LINC00838-201ENST00000562956 J3QQQ9 107 aa6.57□□□□□ -1.36
LINC00838-201ENST00000562956 NDUFV3P56181 108 aaKnown RBP6.57□□□□□ -1.36
LINC00838-201ENST00000562956 CDC42SE2Q9NRR3 84 aa6.57□□□□□ -1.36
LINC00838-201ENST00000562956 DNAH3Q8TD57 4116 aa6.57□□□□□ -1.36
LINC00838-201ENST00000562956 A0A0J9YY99 117 aa6.57□□□□□ -1.36
LINC00838-201ENST00000562956 PAX4O43316 350 aa6.57□□□□□ -1.36
LINC00838-201ENST00000562956 SPART-AS1P0CW21 52 aa6.57□□□□□ -1.36
LINC00838-201ENST00000562956 A0A096LPF7 62 aa6.56□□□□□ -1.36
LINC00838-201ENST00000562956 LEPROTO15243 131 aa6.56□□□□□ -1.36
LINC00838-201ENST00000562956 NTN5Q8WTR8 489 aaPredicted RBP6.56□□□□□ -1.36
LINC00838-201ENST00000562956 VSIG2Q96IQ7 327 aa6.56□□□□□ -1.36
LINC00838-201ENST00000562956 TRAV8-3A0A0A6YYJ7 113 aa6.56□□□□□ -1.36
LINC00838-201ENST00000562956 SLC25A20O43772 301 aa6.56□□□□□ -1.36
LINC00838-201ENST00000562956 COX6A2Q02221 97 aa6.56□□□□□ -1.36
LINC00838-201ENST00000562956 TRAV13-1A0A0B4J241 112 aa6.56□□□□□ -1.36
LINC00838-201ENST00000562956 H7C423 109 aa6.56□□□□□ -1.36
LINC00838-201ENST00000562956 ATP5G1P05496 136 aa6.56□□□□□ -1.36
LINC00838-201ENST00000562956 LGALS3P17931 250 aaKnown RBP6.56□□□□□ -1.36
LINC00838-201ENST00000562956 CHCHD5Q9BSY4 110 aa6.56□□□□□ -1.36
LINC00838-201ENST00000562956 IGHV3-30-3P0DP02 117 aa6.55□□□□□ -1.36
LINC00838-201ENST00000562956 Q1RN00 199 aa6.55□□□□□ -1.36
LINC00838-201ENST00000562956 LINC00242Q5T6M2 205 aa6.55□□□□□ -1.36
LINC00838-201ENST00000562956 TMEM101Q96IK0 257 aa6.55□□□□□ -1.36
LINC00838-201ENST00000562956 CDKN2A-AS1Q9UH64 79 aa6.55□□□□□ -1.36
LINC00838-201ENST00000562956 IGLV4-60A0A075B6I1 120 aa6.55□□□□□ -1.36
LINC00838-201ENST00000562956 F5H768 121 aa6.55□□□□□ -1.36
LINC00838-201ENST00000562956 CFC1BP0CG36 223 aa6.55□□□□□ -1.36
LINC00838-201ENST00000562956 CFC1P0CG37 223 aa6.55□□□□□ -1.36
LINC00838-201ENST00000562956 TEX49A0A1B0GTD5 131 aa6.54□□□□□ -1.36
LINC00838-201ENST00000562956 IFITM1P13164 125 aa6.54□□□□□ -1.36
LINC00838-201ENST00000562956 HTN3P15516 51 aa6.54□□□□□ -1.36
LINC00838-201ENST00000562956 TIRAPP58753 221 aa6.54□□□□□ -1.36
LINC00838-201ENST00000562956 IGLV5-45A0A087WSX0 123 aa6.54□□□□□ -1.36
LINC00838-201ENST00000562956 IGHV1-58A0A0C4DH39 117 aa6.53□□□□□ -1.36
LINC00838-201ENST00000562956 PRB2P02812 416 aaPredicted RBP6.53□□□□□ -1.36
LINC00838-201ENST00000562956 FAM19A3Q7Z5A8 133 aa6.53□□□□□ -1.36
LINC00838-201ENST00000562956 MEIG1Q5JSS6 88 aa6.53□□□□□ -1.36
LINC00838-201ENST00000562956 C15orf53Q8NAA6 179 aa6.53□□□□□ -1.36
LINC00838-201ENST00000562956 TMEM262E9PQX1 116 aa6.53□□□□□ -1.36
LINC00838-201ENST00000562956 HERVK_113P63121 156 aa6.53□□□□□ -1.36
LINC00838-201ENST00000562956 LYRM7Q5U5X0 104 aa6.53□□□□□ -1.36
LINC00838-201ENST00000562956 C10orf126Q8N4M7 172 aa6.52□□□□□ -1.37
LINC00838-201ENST00000562956 PRO1854Q9UHT4 67 aa6.52□□□□□ -1.37
LINC00838-201ENST00000562956 IGKV3OR2-268A0A0C4DH90 116 aa6.51□□□□□ -1.37
LINC00838-201ENST00000562956 A4D1N5 150 aa6.51□□□□□ -1.37
LINC00838-201ENST00000562956 NOTCH1P46531 2555 aa6.51□□□□□ -1.37
LINC00838-201ENST00000562956 TRAV8-4A0A0B4J246 113 aa6.5□□□□□ -1.37
LINC00838-201ENST00000562956 MDFIQ99750 246 aa6.5□□□□□ -1.37
LINC00838-201ENST00000562956 PPDPFQ9H3Y8 114 aa6.5□□□□□ -1.37
LINC00838-201ENST00000562956 NDUFA12Q9UI09 145 aa6.5□□□□□ -1.37
LINC00838-201ENST00000562956 SMIM1B2RUZ4 78 aa6.5□□□□□ -1.37
LINC00838-201ENST00000562956 IGHV3-30P01768 117 aa6.5□□□□□ -1.37
LINC00838-201ENST00000562956 IGHV3-30-5P0DP03 117 aa6.5□□□□□ -1.37
LINC00838-201ENST00000562956 NPC2P61916 151 aa6.5□□□□□ -1.37
LINC00838-201ENST00000562956 IGLV5-39A0A0G2JS06 123 aa6.49□□□□□ -1.37
LINC00838-201ENST00000562956 A0A0J9YXY3 114 aa6.49□□□□□ -1.37
LINC00838-201ENST00000562956 C11orf68Q9H3H3 251 aaKnown RBP6.49□□□□□ -1.37
LINC00838-201ENST00000562956 A0A0J9YWU9 116 aa6.49□□□□□ -1.37
LINC00838-201ENST00000562956 A0A1B0GUV1 79 aa6.49□□□□□ -1.37
LINC00838-201ENST00000562956 EIF4EBP3O60516 100 aaPredicted RBP6.49□□□□□ -1.37
LINC00838-201ENST00000562956 MRPL23Q16540 153 aaKnown RBP6.49□□□□□ -1.37
LINC00838-201ENST00000562956 Q6ZTC4 211 aa6.49□□□□□ -1.37
LINC00838-201ENST00000562956 Q8N3U1 123 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms