RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 TLX1NBP0CAT3 122 aa10.02□□□□□ -0.81
CMTM3-205ENST00000562707 MRPL51Q4U2R6 128 aaKnown RBP10.02□□□□□ -0.81
CMTM3-205ENST00000562707 FAM104BQ5XKR9 115 aa10.02□□□□□ -0.81
CMTM3-205ENST00000562707 FAM19A5Q7Z5A7 132 aaPredicted RBP10.02□□□□□ -0.81
CMTM3-205ENST00000562707 NAT8BQ9UHF3 227 aa10.02□□□□□ -0.81
CMTM3-205ENST00000562707 V9GYV3 84 aa10.02□□□□□ -0.81
CMTM3-205ENST00000562707 CKS2P33552 79 aa10.01□□□□□ -0.81
CMTM3-205ENST00000562707 UBE2D1P51668 147 aa10.01□□□□□ -0.81
CMTM3-205ENST00000562707 RPL39P62891 51 aaKnown RBP10.01□□□□□ -0.81
CMTM3-205ENST00000562707 GAGE2EQ4V326 116 aa10.01□□□□□ -0.81
CMTM3-205ENST00000562707 C10orf25Q5T742 122 aa10.01□□□□□ -0.81
CMTM3-205ENST00000562707 UNQ6190/PRO20217Q6UXQ8 127 aa10.01□□□□□ -0.81
CMTM3-205ENST00000562707 KRTAP11-1Q8IUC1 163 aa10.01□□□□□ -0.81
CMTM3-205ENST00000562707 SPANXA1Q9NS26 97 aa10.01□□□□□ -0.81
CMTM3-205ENST00000562707 GAGE2DQ9UEU5 116 aa10.01□□□□□ -0.81
CMTM3-205ENST00000562707 TRBV24-1A0A075B6N3 115 aa10□□□□□ -0.81
CMTM3-205ENST00000562707 RPL32P62910 135 aaKnown RBP10□□□□□ -0.81
CMTM3-205ENST00000562707 UBE2BP63146 152 aa10□□□□□ -0.81
CMTM3-205ENST00000562707 C6orf48Q9UBA6 75 aa10□□□□□ -0.81
CMTM3-205ENST00000562707 IFITM10A6NMD0 228 aa9.99□□□□□ -0.81
CMTM3-205ENST00000562707 HBBP68871 147 aa9.99□□□□□ -0.81
CMTM3-205ENST00000562707 MRPS36P82909 103 aaKnown RBP9.99□□□□□ -0.81
CMTM3-205ENST00000562707 PRR4Q16378 134 aa9.99□□□□□ -0.81
CMTM3-205ENST00000562707 SMDT1Q9H4I9 107 aa9.99□□□□□ -0.81
CMTM3-205ENST00000562707 M0QXV9 152 aa9.98□□□□□ -0.81
CMTM3-205ENST00000562707 TGIF2-C20orf24A0A0A6YYL0 155 aa9.97□□□□□ -0.81
CMTM3-205ENST00000562707 TNFRSF6BO95407 300 aa9.97□□□□□ -0.81
CMTM3-205ENST00000562707 SRP19P09132 144 aaKnown RBP9.97□□□□□ -0.81
CMTM3-205ENST00000562707 KRTAP1-4P0C5Y4 121 aa9.97□□□□□ -0.81
CMTM3-205ENST00000562707 RPL13AP40429 203 aaKnown RBP9.97□□□□□ -0.81
CMTM3-205ENST00000562707 FAM74A3Q4VXF1 159 aa9.97□□□□□ -0.81
CMTM3-205ENST00000562707 FAM104AQ969W3 186 aa9.97□□□□□ -0.81
CMTM3-205ENST00000562707 A0A1B0GW15 77 aa9.96□□□□□ -0.82
CMTM3-205ENST00000562707 SMIM2Q9BVW6 85 aa9.96□□□□□ -0.82
CMTM3-205ENST00000562707 KRTAP7-1Q8IUC3 87 aa9.95□□□□□ -0.82
CMTM3-205ENST00000562707 TRBV30A0A0K0K1B3 111 aa9.94□□□□□ -0.82
CMTM3-205ENST00000562707 SMIM27A0A1W2PRY6 76 aa9.94□□□□□ -0.82
CMTM3-205ENST00000562707 RPL23P62829 140 aaKnown RBP9.94□□□□□ -0.82
CMTM3-205ENST00000562707 PACRGQ96M98 296 aaPredicted RBP9.94□□□□□ -0.82
CMTM3-205ENST00000562707 D6R8Y8 96 aa9.93□□□□□ -0.82
CMTM3-205ENST00000562707 NDUFC2-KCTD14E9PQ53 114 aa9.93□□□□□ -0.82
CMTM3-205ENST00000562707 F8W036 122 aa9.93□□□□□ -0.82
CMTM3-205ENST00000562707 S100A8P05109 93 aa9.93□□□□□ -0.82
CMTM3-205ENST00000562707 IFI27P40305 119 aaPredicted RBP9.93□□□□□ -0.82
CMTM3-205ENST00000562707 KIAA0087Q14695 138 aa9.93□□□□□ -0.82
CMTM3-205ENST00000562707 ADIRFQ15847 76 aa9.93□□□□□ -0.82
CMTM3-205ENST00000562707 CARHSP1Q9Y2V2 147 aaKnown RBP9.93□□□□□ -0.82
CMTM3-205ENST00000562707 A0A0U1RQV1 116 aa9.92□□□□□ -0.82
CMTM3-205ENST00000562707 RAB5AP20339 215 aa9.92□□□□□ -0.82
CMTM3-205ENST00000562707 NPYP01303 97 aa9.91□□□□□ -0.82
CMTM3-205ENST00000562707 PPBPP02775 128 aa9.91□□□□□ -0.82
CMTM3-205ENST00000562707 C2orf82Q6UX34 121 aa9.91□□□□□ -0.82
CMTM3-205ENST00000562707 C9orf129Q5T035 196 aaKnown RBP9.9□□□□□ -0.82
CMTM3-205ENST00000562707 LINC00242Q5T6M2 205 aa9.9□□□□□ -0.82
CMTM3-205ENST00000562707 NAT8Q9UHE5 227 aa9.9□□□□□ -0.82
CMTM3-205ENST00000562707 ZNF861PO60384 105 aa9.89□□□□□ -0.83
CMTM3-205ENST00000562707 MRPL54Q6P161 138 aaKnown RBP9.89□□□□□ -0.83
CMTM3-205ENST00000562707 PYGO1Q9Y3Y4 419 aa9.89□□□□□ -0.83
CMTM3-205ENST00000562707 LINC01561Q8N1V8 128 aa9.88□□□□□ -0.83
CMTM3-205ENST00000562707 TMEM141Q96I45 108 aa9.88□□□□□ -0.83
CMTM3-205ENST00000562707 IGLV4-3A0A075B6K6 122 aa9.87□□□□□ -0.83
CMTM3-205ENST00000562707 NUPR1O60356 82 aa9.87□□□□□ -0.83
CMTM3-205ENST00000562707 PRSS2P07478 247 aa9.87□□□□□ -0.83
CMTM3-205ENST00000562707 TEX43Q6ZNM6 134 aa9.87□□□□□ -0.83
CMTM3-205ENST00000562707 ORMDL3Q8N138 153 aa9.87□□□□□ -0.83
CMTM3-205ENST00000562707 TSPAN13O95857 204 aa9.86□□□□□ -0.83
CMTM3-205ENST00000562707 CKS1BP61024 79 aa9.86□□□□□ -0.83
CMTM3-205ENST00000562707 LBHQ53QV2 105 aaPredicted RBP9.86□□□□□ -0.83
CMTM3-205ENST00000562707 TMEM136Q6ZRR5 245 aa9.86□□□□□ -0.83
CMTM3-205ENST00000562707 C2orf88Q9BSF0 95 aa9.86□□□□□ -0.83
CMTM3-205ENST00000562707 A0A1B0GXF2 115 aa9.85□□□□□ -0.83
CMTM3-205ENST00000562707 Q6ZN92 141 aa9.85□□□□□ -0.83
CMTM3-205ENST00000562707 PRELID3AQ96N28 172 aa9.85□□□□□ -0.83
CMTM3-205ENST00000562707 C22orf24Q9Y442 160 aa9.85□□□□□ -0.83
CMTM3-205ENST00000562707 C6orf226Q5I0X4 101 aa9.84□□□□□ -0.83
CMTM3-205ENST00000562707 LINC00469Q8N7U9 141 aa9.84□□□□□ -0.83
CMTM3-205ENST00000562707 TOMM7Q9P0U1 55 aa9.84□□□□□ -0.83
CMTM3-205ENST00000562707 CTDSP1Q9GZU7 261 aa9.83□□□□□ -0.84
CMTM3-205ENST00000562707 MUC2Q02817 5179 aa9.83□□□□□ -0.84
CMTM3-205ENST00000562707 LOC389332A0A1B0GUA5 103 aa9.82□□□□□ -0.84
CMTM3-205ENST00000562707 C9JQL5 133 aa9.82□□□□□ -0.84
CMTM3-205ENST00000562707 PEA15Q15121 130 aa9.82□□□□□ -0.84
CMTM3-205ENST00000562707 VCX2Q9H322 139 aa9.82□□□□□ -0.84
CMTM3-205ENST00000562707 XAGE1AQ9HD64 81 aa9.82□□□□□ -0.84
CMTM3-205ENST00000562707 RPL28P46779 137 aaKnown RBP9.81□□□□□ -0.84
CMTM3-205ENST00000562707 ATP5L2Q7Z4Y8 100 aa9.81□□□□□ -0.84
CMTM3-205ENST00000562707 ALKBH7Q9BT30 221 aaPredicted RBP9.81□□□□□ -0.84
CMTM3-205ENST00000562707 CYSLTR1Q9Y271 337 aa9.81□□□□□ -0.84
CMTM3-205ENST00000562707 PRSS47A8MTI9 375 aa9.8□□□□□ -0.84
CMTM3-205ENST00000562707 ZC2HC1BQ5TFG8 222 aa9.8□□□□□ -0.84
CMTM3-205ENST00000562707 Q8IZM0 81 aa9.8□□□□□ -0.84
CMTM3-205ENST00000562707 TYMSOSQ8TAI1 123 aa9.8□□□□□ -0.84
CMTM3-205ENST00000562707 MAP1LC3AQ9H492 121 aa9.8□□□□□ -0.84
CMTM3-205ENST00000562707 CRYGAP11844 174 aa9.79□□□□□ -0.84
CMTM3-205ENST00000562707 C2orf66Q6UXQ4 117 aa9.79□□□□□ -0.84
CMTM3-205ENST00000562707 TP73-AS1Q9UF72 201 aa9.79□□□□□ -0.84
CMTM3-205ENST00000562707 LAMTOR2Q9Y2Q5 125 aa9.79□□□□□ -0.84
CMTM3-205ENST00000562707 BCE1O60756 84 aa9.78□□□□□ -0.84
CMTM3-205ENST00000562707 SRSF3P84103 164 aaKnown RBP9.78□□□□□ -0.84
CMTM3-205ENST00000562707 MRPL55Q7Z7F7 128 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms