RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 OSTCQ9NRP0 149 aa9.32□□□□□ -0.92
SUPT16H-205ENST00000556217 PRR4Q16378 134 aa9.31□□□□□ -0.92
SUPT16H-205ENST00000556217 TCTE3Q8IZS6 198 aa9.31□□□□□ -0.92
SUPT16H-205ENST00000556217 IGHV3OR16-9A0A0B4J2B5 98 aa9.3□□□□□ -0.92
SUPT16H-205ENST00000556217 UBE2BP63146 152 aa9.3□□□□□ -0.92
SUPT16H-205ENST00000556217 C20orf78Q9BR46 151 aa9.3□□□□□ -0.92
SUPT16H-205ENST00000556217 KRTAP1-4P0C5Y4 121 aa9.29□□□□□ -0.92
SUPT16H-205ENST00000556217 GAGE2EQ4V326 116 aa9.29□□□□□ -0.92
SUPT16H-205ENST00000556217 UNQ6190/PRO20217Q6UXQ8 127 aa9.29□□□□□ -0.92
SUPT16H-205ENST00000556217 KRTAP11-1Q8IUC1 163 aa9.29□□□□□ -0.92
SUPT16H-205ENST00000556217 SPANXA1Q9NS26 97 aa9.29□□□□□ -0.92
SUPT16H-205ENST00000556217 GAGE2DQ9UEU5 116 aa9.29□□□□□ -0.92
SUPT16H-205ENST00000556217 LINC00862A6NCI5 91 aa9.28□□□□□ -0.92
SUPT16H-205ENST00000556217 ZNF727A8MUV8 499 aa9.28□□□□□ -0.92
SUPT16H-205ENST00000556217 M0QXV9 152 aa9.28□□□□□ -0.92
SUPT16H-205ENST00000556217 RPL32P62910 135 aaKnown RBP9.28□□□□□ -0.92
SUPT16H-205ENST00000556217 HBBP68871 147 aa9.28□□□□□ -0.92
SUPT16H-205ENST00000556217 MRPL51Q4U2R6 128 aaKnown RBP9.28□□□□□ -0.92
SUPT16H-205ENST00000556217 C10orf25Q5T742 122 aa9.28□□□□□ -0.92
SUPT16H-205ENST00000556217 EIF5A2Q9GZV4 153 aaKnown RBP9.28□□□□□ -0.92
SUPT16H-205ENST00000556217 SMDT1Q9H4I9 107 aa9.28□□□□□ -0.92
SUPT16H-205ENST00000556217 C6orf48Q9UBA6 75 aa9.28□□□□□ -0.92
SUPT16H-205ENST00000556217 NAT8BQ9UHF3 227 aa9.28□□□□□ -0.92
SUPT16H-205ENST00000556217 IFITM10A6NMD0 228 aa9.27□□□□□ -0.93
SUPT16H-205ENST00000556217 RPL39P62891 51 aaKnown RBP9.27□□□□□ -0.93
SUPT16H-205ENST00000556217 MRPS36P82909 103 aaKnown RBP9.27□□□□□ -0.93
SUPT16H-205ENST00000556217 LCE2AQ5TA79 106 aaPredicted RBP9.27□□□□□ -0.93
SUPT16H-205ENST00000556217 FAM104BQ5XKR9 115 aa9.27□□□□□ -0.93
SUPT16H-205ENST00000556217 V9GYV3 84 aa9.27□□□□□ -0.93
SUPT16H-205ENST00000556217 TRBV24-1A0A075B6N3 115 aa9.26□□□□□ -0.93
SUPT16H-205ENST00000556217 TGIF2-C20orf24A0A0A6YYL0 155 aa9.26□□□□□ -0.93
SUPT16H-205ENST00000556217 CKS2P33552 79 aa9.26□□□□□ -0.93
SUPT16H-205ENST00000556217 ALKAL2Q6UX46 152 aa9.26□□□□□ -0.93
SUPT16H-205ENST00000556217 CARHSP1Q9Y2V2 147 aaKnown RBP9.26□□□□□ -0.93
SUPT16H-205ENST00000556217 TRBV30A0A0K0K1B3 111 aa9.25□□□□□ -0.93
SUPT16H-205ENST00000556217 A0A1B0GW15 77 aa9.24□□□□□ -0.93
SUPT16H-205ENST00000556217 FAM104AQ969W3 186 aa9.24□□□□□ -0.93
SUPT16H-205ENST00000556217 SMIM2Q9BVW6 85 aa9.24□□□□□ -0.93
SUPT16H-205ENST00000556217 NDUFC2-KCTD14E9PQ53 114 aa9.23□□□□□ -0.93
SUPT16H-205ENST00000556217 TNFRSF6BO95407 300 aa9.23□□□□□ -0.93
SUPT16H-205ENST00000556217 FAM74A3Q4VXF1 159 aa9.23□□□□□ -0.93
SUPT16H-205ENST00000556217 KRTAP7-1Q8IUC3 87 aa9.23□□□□□ -0.93
SUPT16H-205ENST00000556217 PACRGQ96M98 296 aaPredicted RBP9.23□□□□□ -0.93
SUPT16H-205ENST00000556217 SRP19P09132 144 aaKnown RBP9.21□□□□□ -0.94
SUPT16H-205ENST00000556217 IFI27P40305 119 aaPredicted RBP9.21□□□□□ -0.94
SUPT16H-205ENST00000556217 KIAA0087Q14695 138 aa9.21□□□□□ -0.94
SUPT16H-205ENST00000556217 SMIM27A0A1W2PRY6 76 aa9.2□□□□□ -0.94
SUPT16H-205ENST00000556217 F8W036 122 aa9.2□□□□□ -0.94
SUPT16H-205ENST00000556217 ZNF861PO60384 105 aa9.2□□□□□ -0.94
SUPT16H-205ENST00000556217 S100A8P05109 93 aa9.2□□□□□ -0.94
SUPT16H-205ENST00000556217 C9orf129Q5T035 196 aaKnown RBP9.2□□□□□ -0.94
SUPT16H-205ENST00000556217 D6R8Y8 96 aa9.19□□□□□ -0.94
SUPT16H-205ENST00000556217 NUPR1O60356 82 aa9.19□□□□□ -0.94
SUPT16H-205ENST00000556217 RAB5AP20339 215 aa9.19□□□□□ -0.94
SUPT16H-205ENST00000556217 C2orf82Q6UX34 121 aa9.19□□□□□ -0.94
SUPT16H-205ENST00000556217 PPBPP02775 128 aa9.18□□□□□ -0.94
SUPT16H-205ENST00000556217 RPL23P62829 140 aaKnown RBP9.18□□□□□ -0.94
SUPT16H-205ENST00000556217 ADIRFQ15847 76 aa9.18□□□□□ -0.94
SUPT16H-205ENST00000556217 LINC00242Q5T6M2 205 aa9.18□□□□□ -0.94
SUPT16H-205ENST00000556217 PYGO1Q9Y3Y4 419 aa9.18□□□□□ -0.94
SUPT16H-205ENST00000556217 TSPAN13O95857 204 aa9.17□□□□□ -0.94
SUPT16H-205ENST00000556217 NPYP01303 97 aa9.17□□□□□ -0.94
SUPT16H-205ENST00000556217 LBHQ53QV2 105 aaPredicted RBP9.17□□□□□ -0.94
SUPT16H-205ENST00000556217 LINC01561Q8N1V8 128 aa9.17□□□□□ -0.94
SUPT16H-205ENST00000556217 TMEM141Q96I45 108 aa9.17□□□□□ -0.94
SUPT16H-205ENST00000556217 PRSS2P07478 247 aa9.16□□□□□ -0.94
SUPT16H-205ENST00000556217 CKS1BP61024 79 aa9.16□□□□□ -0.94
SUPT16H-205ENST00000556217 C2orf88Q9BSF0 95 aa9.16□□□□□ -0.94
SUPT16H-205ENST00000556217 IGLV4-3A0A075B6K6 122 aa9.15□□□□□ -0.94
SUPT16H-205ENST00000556217 TEX43Q6ZNM6 134 aa9.15□□□□□ -0.94
SUPT16H-205ENST00000556217 NAT8Q9UHE5 227 aa9.15□□□□□ -0.94
SUPT16H-205ENST00000556217 MRPL54Q6P161 138 aaKnown RBP9.14□□□□□ -0.95
SUPT16H-205ENST00000556217 AKAP14Q86UN6 197 aa9.14□□□□□ -0.95
SUPT16H-205ENST00000556217 ORMDL3Q8N138 153 aa9.14□□□□□ -0.95
SUPT16H-205ENST00000556217 C22orf24Q9Y442 160 aa9.14□□□□□ -0.95
SUPT16H-205ENST00000556217 RPL28P46779 137 aaKnown RBP9.13□□□□□ -0.95
SUPT16H-205ENST00000556217 C6orf226Q5I0X4 101 aa9.13□□□□□ -0.95
SUPT16H-205ENST00000556217 Q6ZN92 141 aa9.13□□□□□ -0.95
SUPT16H-205ENST00000556217 CTDSP1Q9GZU7 261 aa9.13□□□□□ -0.95
SUPT16H-205ENST00000556217 A0A1B0GXF2 115 aa9.12□□□□□ -0.95
SUPT16H-205ENST00000556217 CRYGAP11844 174 aa9.12□□□□□ -0.95
SUPT16H-205ENST00000556217 TMEM136Q6ZRR5 245 aa9.12□□□□□ -0.95
SUPT16H-205ENST00000556217 LINC00469Q8N7U9 141 aa9.12□□□□□ -0.95
SUPT16H-205ENST00000556217 TYMSOSQ8TAI1 123 aa9.12□□□□□ -0.95
SUPT16H-205ENST00000556217 PRELID3AQ96N28 172 aa9.12□□□□□ -0.95
SUPT16H-205ENST00000556217 TOMM7Q9P0U1 55 aa9.12□□□□□ -0.95
SUPT16H-205ENST00000556217 XAGE1AQ9HD64 81 aa9.11□□□□□ -0.95
SUPT16H-205ENST00000556217 TP73-AS1Q9UF72 201 aa9.11□□□□□ -0.95
SUPT16H-205ENST00000556217 A0A087X002 238 aa9.1□□□□□ -0.95
SUPT16H-205ENST00000556217 MRPL55Q7Z7F7 128 aaKnown RBP9.1□□□□□ -0.95
SUPT16H-205ENST00000556217 Q8IZM0 81 aa9.1□□□□□ -0.95
SUPT16H-205ENST00000556217 ALKBH7Q9BT30 221 aaPredicted RBP9.1□□□□□ -0.95
SUPT16H-205ENST00000556217 VCX2Q9H322 139 aa9.1□□□□□ -0.95
SUPT16H-205ENST00000556217 CYSLTR1Q9Y271 337 aa9.1□□□□□ -0.95
SUPT16H-205ENST00000556217 BCE1O60756 84 aa9.09□□□□□ -0.95
SUPT16H-205ENST00000556217 ATP5L2Q7Z4Y8 100 aa9.08□□□□□ -0.96
SUPT16H-205ENST00000556217 MAP1LC3AQ9H492 121 aa9.08□□□□□ -0.96
SUPT16H-205ENST00000556217 LAMTOR2Q9Y2Q5 125 aa9.08□□□□□ -0.96
SUPT16H-205ENST00000556217 LOC389332A0A1B0GUA5 103 aa9.07□□□□□ -0.96
SUPT16H-205ENST00000556217 PRSS47A8MTI9 375 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms