RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 TMEM170BQ5T4T1 132 aa7.37□□□□□ -1.23
PABPN1-203ENST00000553960 LINC00588Q9Y4M8 146 aa7.37□□□□□ -1.23
PABPN1-203ENST00000553960 IBA57-AS1B1ANH7 110 aa7.36□□□□□ -1.23
PABPN1-203ENST00000553960 SMIM1B2RUZ4 78 aa7.36□□□□□ -1.23
PABPN1-203ENST00000553960 IGLL5B9A064 214 aa7.36□□□□□ -1.23
PABPN1-203ENST00000553960 J3QQQ9 107 aa7.36□□□□□ -1.23
PABPN1-203ENST00000553960 ZFAND6Q6FIF0 208 aa7.36□□□□□ -1.23
PABPN1-203ENST00000553960 ENHOQ6UWT2 76 aa7.36□□□□□ -1.23
PABPN1-203ENST00000553960 WFDC10BQ8IUB3 73 aa7.36□□□□□ -1.23
PABPN1-203ENST00000553960 LINC00269Q8N2A0 174 aa7.36□□□□□ -1.23
PABPN1-203ENST00000553960 LINC00469Q8N7U9 141 aa7.36□□□□□ -1.23
PABPN1-203ENST00000553960 TRAV13-1A0A0B4J241 112 aa7.35□□□□□ -1.23
PABPN1-203ENST00000553960 F8WDY8 70 aa7.35□□□□□ -1.23
PABPN1-203ENST00000553960 TIMM17BO60830 172 aa7.35□□□□□ -1.23
PABPN1-203ENST00000553960 ANGP03950 147 aaKnown RBP7.35□□□□□ -1.23
PABPN1-203ENST00000553960 IGHV3-30-3P0DP02 117 aa7.35□□□□□ -1.23
PABPN1-203ENST00000553960 TAL2Q16559 108 aa7.35□□□□□ -1.23
PABPN1-203ENST00000553960 RNASE13Q5GAN3 156 aaKnown RBP7.35□□□□□ -1.23
PABPN1-203ENST00000553960 KRTAP26-1Q6PEX3 210 aa7.35□□□□□ -1.23
PABPN1-203ENST00000553960 DNAH7Q8WXX0 4024 aa7.34□□□□□ -1.23
PABPN1-203ENST00000553960 TRAV8-3A0A0A6YYJ7 113 aa7.34□□□□□ -1.23
PABPN1-203ENST00000553960 A0A0J9YXY3 114 aa7.34□□□□□ -1.23
PABPN1-203ENST00000553960 MYMXA0A1B0GTQ4 84 aa7.34□□□□□ -1.23
PABPN1-203ENST00000553960 LBHQ53QV2 105 aaPredicted RBP7.34□□□□□ -1.23
PABPN1-203ENST00000553960 C2orf91Q6ZV80 131 aa7.34□□□□□ -1.23
PABPN1-203ENST00000553960 Q6ZVH6 145 aa7.34□□□□□ -1.23
PABPN1-203ENST00000553960 C14orf144Q96I85 54 aa7.34□□□□□ -1.23
PABPN1-203ENST00000553960 PRO1933Q9H354 126 aa7.34□□□□□ -1.23
PABPN1-203ENST00000553960 NDUFA1O15239 70 aa7.33□□□□□ -1.24
PABPN1-203ENST00000553960 PTTG1IPP53801 180 aa7.33□□□□□ -1.24
PABPN1-203ENST00000553960 HERV-K104P63124 156 aa7.33□□□□□ -1.24
PABPN1-203ENST00000553960 PCP2Q8IVA1 136 aa7.33□□□□□ -1.24
PABPN1-203ENST00000553960 Q8IZM0 81 aa7.33□□□□□ -1.24
PABPN1-203ENST00000553960 MUC7Q8TAX7 377 aa7.33□□□□□ -1.24
PABPN1-203ENST00000553960 CHCHD10Q8WYQ3 142 aaPredicted RBP7.33□□□□□ -1.24
PABPN1-203ENST00000553960 ZNF625Q96I27 306 aaPredicted RBP7.33□□□□□ -1.24
PABPN1-203ENST00000553960 SPANXB1Q9NS25 103 aaPredicted RBP7.33□□□□□ -1.24
PABPN1-203ENST00000553960 COX11Q9Y6N1 276 aa7.33□□□□□ -1.24
PABPN1-203ENST00000553960 CXCL5P42830 114 aa7.32□□□□□ -1.24
PABPN1-203ENST00000553960 FOXI1Q12951 378 aa7.32□□□□□ -1.24
PABPN1-203ENST00000553960 WWC2-AS2Q96NR7 200 aa7.32□□□□□ -1.24
PABPN1-203ENST00000553960 TP73-AS1Q9UF72 201 aa7.32□□□□□ -1.24
PABPN1-203ENST00000553960 KLK12Q9UKR0 248 aa7.32□□□□□ -1.24
PABPN1-203ENST00000553960 IGHV3-64A0A075B6Q5 118 aa7.31□□□□□ -1.24
PABPN1-203ENST00000553960 LINC00587B1AMM8 73 aa7.31□□□□□ -1.24
PABPN1-203ENST00000553960 COX7A2LO14548 114 aa7.31□□□□□ -1.24
PABPN1-203ENST00000553960 HNRNPA3P51991 378 aaKnown RBP7.31□□□□□ -1.24
PABPN1-203ENST00000553960 TSPEAR-AS2P59090 65 aa7.31□□□□□ -1.24
PABPN1-203ENST00000553960 Q9H8V8 135 aa7.31□□□□□ -1.24
PABPN1-203ENST00000553960 APOMO95445 188 aa7.3□□□□□ -1.24
PABPN1-203ENST00000553960 CRPP02741 224 aa7.3□□□□□ -1.24
PABPN1-203ENST00000553960 LGALS3P17931 250 aaKnown RBP7.3□□□□□ -1.24
PABPN1-203ENST00000553960 KIAA0087Q14695 138 aa7.3□□□□□ -1.24
PABPN1-203ENST00000553960 Q8N3U1 123 aa7.3□□□□□ -1.24
PABPN1-203ENST00000553960 MAPKAPK5-AS1Q8N8E1 139 aa7.3□□□□□ -1.24
PABPN1-203ENST00000553960 RMI2Q96E14 147 aa7.3□□□□□ -1.24
PABPN1-203ENST00000553960 TM2D2Q9BX73 214 aa7.3□□□□□ -1.24
PABPN1-203ENST00000553960 NDUFA12Q9UI09 145 aa7.3□□□□□ -1.24
PABPN1-203ENST00000553960 ZNF815PA8K554 130 aa7.29□□□□□ -1.24
PABPN1-203ENST00000553960 HSD52Q0P140 79 aa7.29□□□□□ -1.24
PABPN1-203ENST00000553960 TTC32Q5I0X7 151 aa7.29□□□□□ -1.24
PABPN1-203ENST00000553960 CSMD3Q7Z407 3707 aa7.29□□□□□ -1.24
PABPN1-203ENST00000553960 GVQW2A0A096LPI5 108 aaPredicted RBP7.28□□□□□ -1.24
PABPN1-203ENST00000553960 C3orf84H3BNL1 204 aa7.28□□□□□ -1.24
PABPN1-203ENST00000553960 SPINK8P0C7L1 97 aa7.28□□□□□ -1.24
PABPN1-203ENST00000553960 GCSHP23434 173 aa7.28□□□□□ -1.24
PABPN1-203ENST00000553960 COX7B2Q8TF08 81 aa7.28□□□□□ -1.24
PABPN1-203ENST00000553960 UBE2WQ96B02 151 aa7.28□□□□□ -1.24
PABPN1-203ENST00000553960 TENM2Q9NT68 2774 aa7.28□□□□□ -1.24
PABPN1-203ENST00000553960 LOC107984156A0A0G2JMH3 177 aa7.27□□□□□ -1.25
PABPN1-203ENST00000553960 M0R143 59 aa7.27□□□□□ -1.25
PABPN1-203ENST00000553960 IGHV3-30P01768 117 aa7.27□□□□□ -1.25
PABPN1-203ENST00000553960 IGHV3-33P01772 117 aa7.27□□□□□ -1.25
PABPN1-203ENST00000553960 IGHV3-30-5P0DP03 117 aa7.27□□□□□ -1.25
PABPN1-203ENST00000553960 XCL1P47992 114 aa7.27□□□□□ -1.25
PABPN1-203ENST00000553960 COX17Q14061 63 aa7.27□□□□□ -1.25
PABPN1-203ENST00000553960 ARL17AQ8IVW1 177 aa7.27□□□□□ -1.25
PABPN1-203ENST00000553960 C2orf48Q96LS8 159 aa7.27□□□□□ -1.25
PABPN1-203ENST00000553960 LITAFQ99732 161 aa7.27□□□□□ -1.25
PABPN1-203ENST00000553960 C1orf43Q9BWL3 253 aa7.27□□□□□ -1.25
PABPN1-203ENST00000553960 SPANXDQ9BXN6 97 aa7.27□□□□□ -1.25
PABPN1-203ENST00000553960 SPANXCQ9NY87 97 aa7.27□□□□□ -1.25
PABPN1-203ENST00000553960 TMEM238C9JI98 176 aa7.26□□□□□ -1.25
PABPN1-203ENST00000553960 IFITM1P13164 125 aa7.26□□□□□ -1.25
PABPN1-203ENST00000553960 CTAG1AP78358 180 aa7.26□□□□□ -1.25
PABPN1-203ENST00000553960 CFAP161Q6P656 301 aa7.26□□□□□ -1.25
PABPN1-203ENST00000553960 TGP01266 2768 aa7.25□□□□□ -1.25
PABPN1-203ENST00000553960 A0A1B0GWB2 263 aa7.25□□□□□ -1.25
PABPN1-203ENST00000553960 GAGE12HA6NDE8 117 aa7.25□□□□□ -1.25
PABPN1-203ENST00000553960 PRSS2P07478 247 aa7.25□□□□□ -1.25
PABPN1-203ENST00000553960 C5orf38Q86SI9 138 aa7.25□□□□□ -1.25
PABPN1-203ENST00000553960 COPS9Q8WXC6 57 aa7.25□□□□□ -1.25
PABPN1-203ENST00000553960 TTTY13Q9BZ97 58 aa7.25□□□□□ -1.25
PABPN1-203ENST00000553960 CIRBPQ14011 172 aaKnown RBP7.24□□□□□ -1.25
PABPN1-203ENST00000553960 RNF151Q2KHN1 245 aa7.24□□□□□ -1.25
PABPN1-203ENST00000553960 BVES-AS1Q5T3Y7 98 aa7.24□□□□□ -1.25
PABPN1-203ENST00000553960 SCGB1D4Q6XE38 83 aa7.24□□□□□ -1.25
PABPN1-203ENST00000553960 NBDYA0A0U1RRE5 68 aa7.23□□□□□ -1.25
PABPN1-203ENST00000553960 PCP4L1A6NKN8 68 aa7.23□□□□□ -1.25
PABPN1-203ENST00000553960 MALP21145 153 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms