RNA–Protein interactions for RNA: ENST00000541982.5

CD4-210, Transcript of CD4 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-210ENST00000541982 MT-ND6P03923 174 aa9.5□□□□□ -0.89
CD4-210ENST00000541982 OR10D4PQ8NGN7 298 aa9.5□□□□□ -0.89
CD4-210ENST00000541982 SMIM2Q9BVW6 85 aa9.5□□□□□ -0.89
CD4-210ENST00000541982 F8W036 122 aa9.49□□□□□ -0.89
CD4-210ENST00000541982 F8WDY8 70 aa9.49□□□□□ -0.89
CD4-210ENST00000541982 MRPS36P82909 103 aaKnown RBP9.49□□□□□ -0.89
CD4-210ENST00000541982 SPAG11BQ08648 103 aa9.49□□□□□ -0.89
CD4-210ENST00000541982 SPANXA1Q9NS26 97 aa9.49□□□□□ -0.89
CD4-210ENST00000541982 IGHV3OR16-9A0A0B4J2B5 98 aa9.48□□□□□ -0.89
CD4-210ENST00000541982 PPBPP02775 128 aa9.48□□□□□ -0.89
CD4-210ENST00000541982 RPL39P62891 51 aaKnown RBP9.48□□□□□ -0.89
CD4-210ENST00000541982 HBBP68871 147 aa9.48□□□□□ -0.89
CD4-210ENST00000541982 SRSF3P84103 164 aaKnown RBP9.48□□□□□ -0.89
CD4-210ENST00000541982 C9orf116Q5BN46 136 aaPredicted RBP9.48□□□□□ -0.89
CD4-210ENST00000541982 FAM104AQ969W3 186 aa9.48□□□□□ -0.89
CD4-210ENST00000541982 A0A1B0GXF2 115 aa9.47□□□□□ -0.89
CD4-210ENST00000541982 D6R8Y8 96 aa9.47□□□□□ -0.89
CD4-210ENST00000541982 RPL18AQ02543 176 aaKnown RBP9.47□□□□□ -0.89
CD4-210ENST00000541982 MRPL54Q6P161 138 aaKnown RBP9.47□□□□□ -0.89
CD4-210ENST00000541982 DIRC1Q969H9 104 aa9.47□□□□□ -0.89
CD4-210ENST00000541982 MRPL35Q9NZE8 188 aaKnown RBP9.47□□□□□ -0.89
CD4-210ENST00000541982 C1orf137Q5JT78 98 aa9.46□□□□□ -0.9
CD4-210ENST00000541982 PRR26Q8N8Z3 221 aa9.46□□□□□ -0.9
CD4-210ENST00000541982 ORAOV1Q8WV07 137 aa9.46□□□□□ -0.9
CD4-210ENST00000541982 OPRPNQ99935 248 aaPredicted RBP9.46□□□□□ -0.9
CD4-210ENST00000541982 NPYP01303 97 aa9.45□□□□□ -0.9
CD4-210ENST00000541982 IMMP2LQ96T52 175 aa9.45□□□□□ -0.9
CD4-210ENST00000541982 NDUFA1O15239 70 aa9.44□□□□□ -0.9
CD4-210ENST00000541982 ATP5L2Q7Z4Y8 100 aa9.44□□□□□ -0.9
CD4-210ENST00000541982 A0A1B0GVG6 124 aa9.43□□□□□ -0.9
CD4-210ENST00000541982 IFITM10A6NMD0 228 aa9.43□□□□□ -0.9
CD4-210ENST00000541982 TLX1NBP0CAT3 122 aa9.43□□□□□ -0.9
CD4-210ENST00000541982 PRR4Q16378 134 aa9.43□□□□□ -0.9
CD4-210ENST00000541982 ORMDL3Q8N138 153 aa9.43□□□□□ -0.9
CD4-210ENST00000541982 PYGO1Q9Y3Y4 419 aa9.43□□□□□ -0.9
CD4-210ENST00000541982 IGLV1-50A0A075B6I6 118 aa9.42□□□□□ -0.9
CD4-210ENST00000541982 RAB5AP20339 215 aa9.42□□□□□ -0.9
CD4-210ENST00000541982 IFI27P40305 119 aaPredicted RBP9.42□□□□□ -0.9
CD4-210ENST00000541982 TMEM136Q6ZRR5 245 aa9.42□□□□□ -0.9
CD4-210ENST00000541982 PHF5AQ7RTV0 110 aaKnown RBP9.42□□□□□ -0.9
CD4-210ENST00000541982 TGIF2-C20orf24A0A0A6YYL0 155 aa9.41□□□□□ -0.9
CD4-210ENST00000541982 IGLV7-43P04211 117 aa9.41□□□□□ -0.9
CD4-210ENST00000541982 PRELID3AQ96N28 172 aa9.41□□□□□ -0.9
CD4-210ENST00000541982 A0A087WZ39 114 aa9.4□□□□□ -0.9
CD4-210ENST00000541982 PRSS47A8MTI9 375 aa9.4□□□□□ -0.9
CD4-210ENST00000541982 H0Y9J4 135 aa9.4□□□□□ -0.9
CD4-210ENST00000541982 C10orf25Q5T742 122 aa9.4□□□□□ -0.9
CD4-210ENST00000541982 UNQ6190/PRO20217Q6UXQ8 127 aa9.4□□□□□ -0.9
CD4-210ENST00000541982 C6orf48Q9UBA6 75 aa9.4□□□□□ -0.9
CD4-210ENST00000541982 LAMTOR2Q9Y2Q5 125 aa9.4□□□□□ -0.9
CD4-210ENST00000541982 KRTAP9-6A0A140TA67 174 aa9.39□□□□□ -0.91
CD4-210ENST00000541982 KIAA0087Q14695 138 aa9.39□□□□□ -0.91
CD4-210ENST00000541982 IGLV4-3A0A075B6K6 122 aa9.38□□□□□ -0.91
CD4-210ENST00000541982 LINC00242Q5T6M2 205 aa9.38□□□□□ -0.91
CD4-210ENST00000541982 TMEM141Q96I45 108 aa9.38□□□□□ -0.91
CD4-210ENST00000541982 TRBV30A0A0K0K1B3 111 aa9.37□□□□□ -0.91
CD4-210ENST00000541982 RPL13AP40429 203 aaKnown RBP9.37□□□□□ -0.91
CD4-210ENST00000541982 UBE2D1P51668 147 aa9.37□□□□□ -0.91
CD4-210ENST00000541982 LINC01561Q8N1V8 128 aa9.37□□□□□ -0.91
CD4-210ENST00000541982 FAM168BA1KXE4 195 aa9.36□□□□□ -0.91
CD4-210ENST00000541982 TEX43Q6ZNM6 134 aa9.36□□□□□ -0.91
CD4-210ENST00000541982 MAP1LC3AQ9H492 121 aa9.36□□□□□ -0.91
CD4-210ENST00000541982 PNRC1Q12796 327 aaPredicted RBP9.35□□□□□ -0.91
CD4-210ENST00000541982 GAGE2EQ4V326 116 aa9.35□□□□□ -0.91
CD4-210ENST00000541982 ANAPC16Q96DE5 110 aa9.35□□□□□ -0.91
CD4-210ENST00000541982 GAGE2DQ9UEU5 116 aa9.35□□□□□ -0.91
CD4-210ENST00000541982 LOC389332A0A1B0GUA5 103 aa9.34□□□□□ -0.91
CD4-210ENST00000541982 FAM19A5Q7Z5A7 132 aaPredicted RBP9.34□□□□□ -0.91
CD4-210ENST00000541982 Q8N8P6 123 aa9.34□□□□□ -0.91
CD4-210ENST00000541982 C2orf88Q9BSF0 95 aa9.34□□□□□ -0.91
CD4-210ENST00000541982 CYSLTR1Q9Y271 337 aa9.34□□□□□ -0.91
CD4-210ENST00000541982 NDUFC2-KCTD14E9PQ53 114 aa9.33□□□□□ -0.92
CD4-210ENST00000541982 K7EMI3 77 aa9.33□□□□□ -0.92
CD4-210ENST00000541982 MT-ND4LP03901 98 aa9.33□□□□□ -0.92
CD4-210ENST00000541982 NPSP0C0P6 89 aa9.33□□□□□ -0.92
CD4-210ENST00000541982 LCE2AQ5TA79 106 aaPredicted RBP9.33□□□□□ -0.92
CD4-210ENST00000541982 C2orf66Q6UXQ4 117 aa9.33□□□□□ -0.92
CD4-210ENST00000541982 Q6ZN92 141 aa9.33□□□□□ -0.92
CD4-210ENST00000541982 KRTAP11-1Q8IUC1 163 aa9.33□□□□□ -0.92
CD4-210ENST00000541982 PACRGQ96M98 296 aaPredicted RBP9.33□□□□□ -0.92
CD4-210ENST00000541982 AMELXQ99217 191 aa9.33□□□□□ -0.92
CD4-210ENST00000541982 KRTAP1-4P0C5Y4 121 aa9.32□□□□□ -0.92
CD4-210ENST00000541982 ORMDL2Q53FV1 153 aa9.32□□□□□ -0.92
CD4-210ENST00000541982 KRTAP7-1Q8IUC3 87 aa9.32□□□□□ -0.92
CD4-210ENST00000541982 FAT4Q6V0I7 4981 aa9.32□□□□□ -0.92
CD4-210ENST00000541982 M0QXV9 152 aa9.31□□□□□ -0.92
CD4-210ENST00000541982 C2orf82Q6UX34 121 aa9.31□□□□□ -0.92
CD4-210ENST00000541982 LINC00173Q6ZV60 143 aa9.31□□□□□ -0.92
CD4-210ENST00000541982 FAM19A3Q7Z5A8 133 aa9.31□□□□□ -0.92
CD4-210ENST00000541982 VCX2Q9H322 139 aa9.31□□□□□ -0.92
CD4-210ENST00000541982 CARHSP1Q9Y2V2 147 aaKnown RBP9.3□□□□□ -0.92
CD4-210ENST00000541982 IGIPA6NJ69 53 aa9.29□□□□□ -0.92
CD4-210ENST00000541982 UBE2BP63146 152 aa9.29□□□□□ -0.92
CD4-210ENST00000541982 C9orf129Q5T035 196 aaKnown RBP9.29□□□□□ -0.92
CD4-210ENST00000541982 ZC2HC1BQ5TFG8 222 aa9.29□□□□□ -0.92
CD4-210ENST00000541982 NXT2Q9NPJ8 142 aaKnown RBP9.29□□□□□ -0.92
CD4-210ENST00000541982 PRSS2P07478 247 aa9.28□□□□□ -0.92
CD4-210ENST00000541982 G0S2P27469 103 aa9.28□□□□□ -0.92
CD4-210ENST00000541982 PAPPA-AS1Q5QFB9 102 aa9.28□□□□□ -0.92
CD4-210ENST00000541982 Q8IZM0 81 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms