RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 FHITP49789 147 aa2.64□□□□□ -1.99
SNHG1-214ENST00000540865 DEFA3P59666 94 aa2.64□□□□□ -1.99
SNHG1-214ENST00000540865 LBHQ53QV2 105 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-214ENST00000540865 FAM19A5Q7Z5A7 132 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-214ENST00000540865 BTF3L4Q96K17 158 aa2.64□□□□□ -1.99
SNHG1-214ENST00000540865 IMMP2LQ96T52 175 aa2.64□□□□□ -1.99
SNHG1-214ENST00000540865 OPRPNQ99935 248 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-214ENST00000540865 KRTAP4-1Q9BYQ7 146 aa2.64□□□□□ -1.99
SNHG1-214ENST00000540865 PPDPFQ9H3Y8 114 aa2.64□□□□□ -1.99
SNHG1-214ENST00000540865 MRPL35Q9NZE8 188 aaKnown RBP2.64□□□□□ -1.99
SNHG1-214ENST00000540865 CTXND1A0A1B0GTU2 59 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 A4D1N5 150 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 CCDC160A6NGH7 325 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 C1orf196B1AJZ1 125 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 M0QXV9 152 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 NUPR1O60356 82 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 TLX1NBP0CAT3 122 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 TRGC1P0CF51 173 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 IGLC6P0CF74 106 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 AKR1C3P42330 323 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 H2BFSP57053 126 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 ZNF726P1Q15940 193 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 ADAMTSL4-AS1Q5T5F5 129 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 KRTAP7-1Q8IUC3 87 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 LINC00337Q8N6G1 96 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 LINC00304Q8N9R0 145 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 OR2D3Q8NGH3 330 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 FAM210AQ96ND0 272 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 CCDC32Q9BV29 185 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 CDC42SE2Q9NRR3 84 aa2.63□□□□□ -1.99
SNHG1-214ENST00000540865 FAM240BA0A1B0GVZ2 78 aa2.62□□□□□ -1.99
SNHG1-214ENST00000540865 F2Z2F3 143 aa2.62□□□□□ -1.99
SNHG1-214ENST00000540865 RPS20P60866 119 aaKnown RBP2.62□□□□□ -1.99
SNHG1-214ENST00000540865 MT1HP80294 61 aa2.62□□□□□ -1.99
SNHG1-214ENST00000540865 SPAG11BQ08648 103 aa2.62□□□□□ -1.99
SNHG1-214ENST00000540865 TMEM241Q24JQ0 296 aa2.62□□□□□ -1.99
SNHG1-214ENST00000540865 KRTAP13-2Q52LG2 175 aa2.62□□□□□ -1.99
SNHG1-214ENST00000540865 FP248Q71RG6 208 aaPredicted RBP2.62□□□□□ -1.99
SNHG1-214ENST00000540865 MRPL52Q86TS9 123 aaKnown RBP2.62□□□□□ -1.99
SNHG1-214ENST00000540865 BAGE2Q86Y30 109 aa2.62□□□□□ -1.99
SNHG1-214ENST00000540865 GATD1Q8NB37 220 aa2.62□□□□□ -1.99
SNHG1-214ENST00000540865 OR10D4PQ8NGN7 298 aa2.62□□□□□ -1.99
SNHG1-214ENST00000540865 STOML3Q8TAV4 291 aa2.62□□□□□ -1.99
SNHG1-214ENST00000540865 TPPP3Q9BW30 176 aa2.62□□□□□ -1.99
SNHG1-214ENST00000540865 I3L3M4 83 aa2.61□□□□□ -1.99
SNHG1-214ENST00000540865 NDUFA1O15239 70 aa2.61□□□□□ -1.99
SNHG1-214ENST00000540865 PMCHP20382 165 aa2.61□□□□□ -1.99
SNHG1-214ENST00000540865 RPL28P46779 137 aaKnown RBP2.61□□□□□ -1.99
SNHG1-214ENST00000540865 KRTAP13-3Q3SY46 172 aa2.61□□□□□ -1.99
SNHG1-214ENST00000540865 FAM229BQ4G0N7 80 aa2.61□□□□□ -1.99
SNHG1-214ENST00000540865 LINC00242Q5T6M2 205 aa2.61□□□□□ -1.99
SNHG1-214ENST00000540865 MRAP2Q96G30 205 aa2.61□□□□□ -1.99
SNHG1-214ENST00000540865 SMDT1Q9H4I9 107 aa2.61□□□□□ -1.99
SNHG1-214ENST00000540865 XKRY2A2RUG3 117 aa2.6□□□□□ -1.99
SNHG1-214ENST00000540865 SDHAF1A6NFY7 115 aa2.6□□□□□ -1.99
SNHG1-214ENST00000540865 INMT-MINDY4F8WBC2 141 aa2.6□□□□□ -1.99
SNHG1-214ENST00000540865 KRTAP19-2Q3LHN2 52 aa2.6□□□□□ -1.99
SNHG1-214ENST00000540865 TEX261Q6UWH6 196 aa2.6□□□□□ -1.99
SNHG1-214ENST00000540865 C5orf38Q86SI9 138 aa2.6□□□□□ -1.99
SNHG1-214ENST00000540865 RPL39LQ96EH5 51 aaKnown RBP2.6□□□□□ -1.99
SNHG1-214ENST00000540865 CYTL1Q9NRR1 136 aa2.6□□□□□ -1.99
SNHG1-214ENST00000540865 C6orf48Q9UBA6 75 aa2.6□□□□□ -1.99
SNHG1-214ENST00000540865 ALG5Q9Y673 324 aa2.6□□□□□ -1.99
SNHG1-214ENST00000540865 NEBP20929 6669 aa2.59□□□□□ -1.99
SNHG1-214ENST00000540865 IGKV2D-26A0A0A0MRZ7 120 aa2.59□□□□□ -1.99
SNHG1-214ENST00000540865 TRAV13-1A0A0B4J241 112 aa2.59□□□□□ -1.99
SNHG1-214ENST00000540865 TRBV6-5A0A0K0K1A5 114 aa2.59□□□□□ -1.99
SNHG1-214ENST00000540865 MAP1LC3B2A6NCE7 125 aa2.59□□□□□ -1.99
SNHG1-214ENST00000540865 BCE1O60756 84 aa2.59□□□□□ -1.99
SNHG1-214ENST00000540865 CTRLP40313 264 aa2.59□□□□□ -1.99
SNHG1-214ENST00000540865 SMAGPQ0VAQ4 97 aa2.59□□□□□ -1.99
SNHG1-214ENST00000540865 C9orf129Q5T035 196 aaKnown RBP2.59□□□□□ -1.99
SNHG1-214ENST00000540865 ZC2HC1BQ5TFG8 222 aa2.59□□□□□ -1.99
SNHG1-214ENST00000540865 LYZL1Q6UWQ5 148 aa2.59□□□□□ -1.99
SNHG1-214ENST00000540865 UNQ6190/PRO20217Q6UXQ8 127 aa2.59□□□□□ -1.99
SNHG1-214ENST00000540865 C9orf62Q8N4C0 152 aa2.59□□□□□ -1.99
SNHG1-214ENST00000540865 ORAOV1Q8WV07 137 aa2.59□□□□□ -1.99
SNHG1-214ENST00000540865 MAP1LC3BQ9GZQ8 125 aa2.59□□□□□ -1.99
SNHG1-214ENST00000540865 ANAPC11Q9NYG5 84 aa2.59□□□□□ -1.99
SNHG1-214ENST00000540865 CSDC2Q9Y534 153 aaKnown RBP2.59□□□□□ -1.99
SNHG1-214ENST00000540865 TRBV30A0A0K0K1B3 111 aa2.58□□□□□ -2
SNHG1-214ENST00000540865 A0A1B0GVG6 124 aa2.58□□□□□ -2
SNHG1-214ENST00000540865 C7orf77A4D0Y5 90 aa2.58□□□□□ -2
SNHG1-214ENST00000540865 NDUFC2-KCTD14E9PQ53 114 aa2.58□□□□□ -2
SNHG1-214ENST00000540865 SSNA1O43805 119 aa2.58□□□□□ -2
SNHG1-214ENST00000540865 PFDN1O60925 122 aa2.58□□□□□ -2
SNHG1-214ENST00000540865 IFNA1P01562 189 aa2.58□□□□□ -2
SNHG1-214ENST00000540865 RPL35P42766 123 aaKnown RBP2.58□□□□□ -2
SNHG1-214ENST00000540865 KRTAP10-5P60370 271 aa2.58□□□□□ -2
SNHG1-214ENST00000540865 AKR1C8PQ5T2L2 129 aa2.58□□□□□ -2
SNHG1-214ENST00000540865 RPL7L1Q6DKI1 246 aaKnown RBP2.58□□□□□ -2
SNHG1-214ENST00000540865 SPAG11AQ6PDA7 123 aa2.58□□□□□ -2
SNHG1-214ENST00000540865 TMUB2Q71RG4 321 aa2.58□□□□□ -2
SNHG1-214ENST00000540865 SMIM15Q7Z3B0 74 aa2.58□□□□□ -2
SNHG1-214ENST00000540865 ENKURQ8TC29 256 aa2.58□□□□□ -2
SNHG1-214ENST00000540865 CNFNQ9BYD5 112 aa2.58□□□□□ -2
SNHG1-214ENST00000540865 TMEM242Q9NWH2 141 aa2.58□□□□□ -2
SNHG1-214ENST00000540865 C22orf24Q9Y442 160 aa2.58□□□□□ -2
SNHG1-214ENST00000540865 BORCS7-ASMTA0A0B4J1R7 106 aa2.57□□□□□ -2
SNHG1-214ENST00000540865 IGHV3OR16-9A0A0B4J2B5 98 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 244.8 ms