RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 C9orf153Q5TBE3 101 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 MUSTN1Q8IVN3 82 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 DSCR8Q96T75 97 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 TIMM21Q9BVV7 248 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 PDZD2O15018 2839 aa3.88□□□□□ -1.79
PROM1-220ENST00000540805 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.88□□□□□ -1.79
PROM1-220ENST00000540805 IGKV2-29A2NJV5 120 aaPredicted RBP3.88□□□□□ -1.79
PROM1-220ENST00000540805 POM121L12Q8N7R1 296 aa3.88□□□□□ -1.79
PROM1-220ENST00000540805 MDFICQ9P1T7 246 aa3.88□□□□□ -1.79
PROM1-220ENST00000540805 M0R2P5 195 aa3.88□□□□□ -1.79
PROM1-220ENST00000540805 IGHV4-31P0DP07 118 aa3.88□□□□□ -1.79
PROM1-220ENST00000540805 POLR2KP53803 58 aaKnown RBP3.88□□□□□ -1.79
PROM1-220ENST00000540805 CLEC2BQ92478 149 aa3.88□□□□□ -1.79
PROM1-220ENST00000540805 APCP25054 2843 aa3.88□□□□□ -1.79
PROM1-220ENST00000540805 RNASE3P12724 160 aaKnown RBP3.88□□□□□ -1.79
PROM1-220ENST00000540805 KLK9Q2XQG4 91 aa3.88□□□□□ -1.79
PROM1-220ENST00000540805 SUMO4Q6EEV6 95 aa3.88□□□□□ -1.79
PROM1-220ENST00000540805 C1orf43Q9BWL3 253 aa3.88□□□□□ -1.79
PROM1-220ENST00000540805 hADV29S1A0JD25 119 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 TMEM223A0PJW6 202 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 ATP5G1P05496 136 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 C2orf82Q6UX34 121 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 RNF152Q8N8N0 203 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 NKAPP1Q8N9T2 125 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 SMCR5Q8TEV8 140 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 LINC01600Q96MT4 127 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 OPRPNQ99935 248 aaPredicted RBP3.87□□□□□ -1.79
PROM1-220ENST00000540805 TMEM126AQ9H061 195 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 SIRPDQ9H106 197 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 TRBV30A0A0K0K1B3 111 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 LGALS9O00182 355 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 EDN2P20800 178 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 OXLD1Q5BKU9 147 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 KIF25-AS1Q9Y6Z4 181 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 TRIAP1O43715 76 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 LINC00315P59091 139 aa3.87□□□□□ -1.79
PROM1-220ENST00000540805 H3BT86 120 aa3.86□□□□□ -1.79
PROM1-220ENST00000540805 IGHG2P01859 326 aa3.86□□□□□ -1.79
PROM1-220ENST00000540805 DNAJC30Q96LL9 226 aa3.86□□□□□ -1.79
PROM1-220ENST00000540805 KLK12Q9UKR0 248 aa3.86□□□□□ -1.79
PROM1-220ENST00000540805 TRAV8-3A0A0A6YYJ7 113 aa3.86□□□□□ -1.79
PROM1-220ENST00000540805 A0A0J9YX75 114 aa3.86□□□□□ -1.79
PROM1-220ENST00000540805 F8WEM9 126 aa3.86□□□□□ -1.79
PROM1-220ENST00000540805 I3L3M4 83 aa3.86□□□□□ -1.79
PROM1-220ENST00000540805 NDUFA7O95182 113 aa3.86□□□□□ -1.79
PROM1-220ENST00000540805 RHOHQ15669 191 aa3.86□□□□□ -1.79
PROM1-220ENST00000540805 ICOSQ9Y6W8 199 aa3.86□□□□□ -1.79
PROM1-220ENST00000540805 A0A0J9YXY3 114 aa3.86□□□□□ -1.79
PROM1-220ENST00000540805 TRBV27A0A0K0K1C4 114 aa3.86□□□□□ -1.79
PROM1-220ENST00000540805 TRBV6-5A0A0K0K1A5 114 aa3.85□□□□□ -1.79
PROM1-220ENST00000540805 SOCS3O14543 225 aa3.85□□□□□ -1.79
PROM1-220ENST00000540805 CDK2AP2O75956 126 aa3.85□□□□□ -1.79
PROM1-220ENST00000540805 FAM19A4Q96LR4 140 aa3.85□□□□□ -1.79
PROM1-220ENST00000540805 PKIGQ9Y2B9 76 aa3.85□□□□□ -1.79
PROM1-220ENST00000540805 A8MZ25 164 aa3.85□□□□□ -1.79
PROM1-220ENST00000540805 IGKV2-24A0A0C4DH68 120 aa3.85□□□□□ -1.79
PROM1-220ENST00000540805 A0A0J9YXV3 536 aa3.85□□□□□ -1.79
PROM1-220ENST00000540805 FAM240AA0A1B0GVK7 77 aa3.85□□□□□ -1.79
PROM1-220ENST00000540805 H3BUA1 57 aa3.85□□□□□ -1.79
PROM1-220ENST00000540805 H7C423 109 aa3.85□□□□□ -1.79
PROM1-220ENST00000540805 DEFB105AQ8NG35 78 aa3.85□□□□□ -1.79
PROM1-220ENST00000540805 LRCOL1A6NCL2 159 aa3.84□□□□□ -1.79
PROM1-220ENST00000540805 A6NDX4 124 aa3.84□□□□□ -1.79
PROM1-220ENST00000540805 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.84□□□□□ -1.79
PROM1-220ENST00000540805 DAND5Q8N907 189 aa3.84□□□□□ -1.79
PROM1-220ENST00000540805 WFDC10AQ9H1F0 79 aa3.84□□□□□ -1.79
PROM1-220ENST00000540805 M0R2N4 97 aa3.84□□□□□ -1.79
PROM1-220ENST00000540805 AVPP01185 164 aa3.84□□□□□ -1.79
PROM1-220ENST00000540805 NDUFA12Q9UI09 145 aa3.84□□□□□ -1.79
PROM1-220ENST00000540805 OTOGQ6ZRI0 2925 aa3.84□□□□□ -1.79
PROM1-220ENST00000540805 RPL18AQ02543 176 aaKnown RBP3.84□□□□□ -1.8
PROM1-220ENST00000540805 RMI2Q96E14 147 aa3.84□□□□□ -1.8
PROM1-220ENST00000540805 SPANXDQ9BXN6 97 aa3.84□□□□□ -1.8
PROM1-220ENST00000540805 SPANXCQ9NY87 97 aa3.84□□□□□ -1.8
PROM1-220ENST00000540805 NIPBLQ6KC79 2804 aaeCLIP3.84□□□□□ -1.8
PROM1-220ENST00000540805 IGLV4-3A0A075B6K6 122 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 A0A087WVE0 104 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 TRBV7-7A0A0K0K1E9 115 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 HIST1H4AP62805 103 aaKnown RBP3.83□□□□□ -1.8
PROM1-220ENST00000540805 C20orf203Q8NBC4 194 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 LINC01006Q8NI28 216 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 C11orf45Q8TAV5 145 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 CAMK2N2Q96S95 79 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 DMBT1Q9UGM3 2413 aaPredicted RBP3.83□□□□□ -1.8
PROM1-220ENST00000540805 KLLNB2CW77 178 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 LST1O00453 97 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 VSIG2Q96IQ7 327 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 LITAFQ99732 161 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 M0QY20 66 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 GHRHP01286 108 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 PRM2P04554 102 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 MIAQ16674 131 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 FAM222AQ5U5X8 452 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 C3orf22Q8N5N4 141 aa3.83□□□□□ -1.8
PROM1-220ENST00000540805 C18orf65Q6ZTR6 163 aa3.82□□□□□ -1.8
PROM1-220ENST00000540805 A0A096LNI7 61 aa3.82□□□□□ -1.8
PROM1-220ENST00000540805 J3KT08 172 aa3.82□□□□□ -1.8
PROM1-220ENST00000540805 Q6YL49 198 aa3.82□□□□□ -1.8
PROM1-220ENST00000540805 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.82□□□□□ -1.8
PROM1-220ENST00000540805 A0A096LNT2 108 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms