RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 NXT2Q9NPJ8 142 aaKnown RBP6.17□□□□□ -1.42
RNF4-221ENST00000513643 IFI27P40305 119 aaPredicted RBP6.16□□□□□ -1.42
RNF4-221ENST00000513643 KIAA1644Q3SXP7 199 aa6.16□□□□□ -1.42
RNF4-221ENST00000513643 ORMDL2Q53FV1 153 aa6.16□□□□□ -1.42
RNF4-221ENST00000513643 LINC00242Q5T6M2 205 aa6.16□□□□□ -1.42
RNF4-221ENST00000513643 C2orf66Q6UXQ4 117 aa6.16□□□□□ -1.42
RNF4-221ENST00000513643 LINC00173Q6ZV60 143 aa6.16□□□□□ -1.42
RNF4-221ENST00000513643 FAM19A3Q7Z5A8 133 aa6.16□□□□□ -1.42
RNF4-221ENST00000513643 PRSS3P2Q8NHM4 247 aa6.16□□□□□ -1.42
RNF4-221ENST00000513643 PLAC8Q9NZF1 115 aa6.16□□□□□ -1.42
RNF4-221ENST00000513643 PLA2G1BP04054 148 aaKnown RBP6.15□□□□□ -1.42
RNF4-221ENST00000513643 CHTF8P0CG12 524 aa6.15□□□□□ -1.42
RNF4-221ENST00000513643 S100PP25815 95 aa6.15□□□□□ -1.42
RNF4-221ENST00000513643 COX6A2Q02221 97 aa6.15□□□□□ -1.42
RNF4-221ENST00000513643 C5orf38Q86SI9 138 aa6.15□□□□□ -1.42
RNF4-221ENST00000513643 LINC00526Q96FQ7 95 aa6.15□□□□□ -1.42
RNF4-221ENST00000513643 TMEM141Q96I45 108 aa6.15□□□□□ -1.42
RNF4-221ENST00000513643 C2orf48Q96LS8 159 aa6.15□□□□□ -1.42
RNF4-221ENST00000513643 YPEL4Q96NS1 127 aa6.15□□□□□ -1.42
RNF4-221ENST00000513643 RPS10P5Q9NQ39 176 aa6.15□□□□□ -1.42
RNF4-221ENST00000513643 IGLV4-69A0A075B6H9 119 aa6.14□□□□□ -1.43
RNF4-221ENST00000513643 A0A087WYN8 130 aa6.14□□□□□ -1.43
RNF4-221ENST00000513643 A0A087WZ39 114 aa6.14□□□□□ -1.43
RNF4-221ENST00000513643 MT-ND6P03923 174 aa6.14□□□□□ -1.43
RNF4-221ENST00000513643 UBE2D1P51668 147 aa6.14□□□□□ -1.43
RNF4-221ENST00000513643 SYCNQ0VAF6 134 aa6.14□□□□□ -1.43
RNF4-221ENST00000513643 TOMM6Q96B49 74 aa6.14□□□□□ -1.43
RNF4-221ENST00000513643 CYSLTR1Q9Y271 337 aa6.14□□□□□ -1.43
RNF4-221ENST00000513643 TGIF2-C20orf24A0A0A6YYL0 155 aa6.13□□□□□ -1.43
RNF4-221ENST00000513643 IFITM10A6NMD0 228 aa6.13□□□□□ -1.43
RNF4-221ENST00000513643 F8WDY8 70 aa6.13□□□□□ -1.43
RNF4-221ENST00000513643 APOC3P02656 99 aa6.13□□□□□ -1.43
RNF4-221ENST00000513643 KIAA0087Q14695 138 aa6.13□□□□□ -1.43
RNF4-221ENST00000513643 RNF151Q2KHN1 245 aa6.13□□□□□ -1.43
RNF4-221ENST00000513643 Q6ZRU5 148 aa6.13□□□□□ -1.43
RNF4-221ENST00000513643 LINC01561Q8N1V8 128 aa6.13□□□□□ -1.43
RNF4-221ENST00000513643 SVBPQ8N300 66 aa6.13□□□□□ -1.43
RNF4-221ENST00000513643 OR10D4PQ8NGN7 298 aa6.13□□□□□ -1.43
RNF4-221ENST00000513643 CARD19Q96LW7 228 aa6.13□□□□□ -1.43
RNF4-221ENST00000513643 TIMM17AQ99595 171 aa6.13□□□□□ -1.43
RNF4-221ENST00000513643 MRPL18Q9H0U6 180 aaKnown RBP6.13□□□□□ -1.43
RNF4-221ENST00000513643 A0A096LNI7 61 aa6.12□□□□□ -1.43
RNF4-221ENST00000513643 ZNF561-AS1K7EIQ3 104 aa6.12□□□□□ -1.43
RNF4-221ENST00000513643 MALP21145 153 aa6.12□□□□□ -1.43
RNF4-221ENST00000513643 G0S2P27469 103 aa6.12□□□□□ -1.43
RNF4-221ENST00000513643 ZC2HC1BQ5TFG8 222 aa6.12□□□□□ -1.43
RNF4-221ENST00000513643 SNAPINO95295 136 aa6.11□□□□□ -1.43
RNF4-221ENST00000513643 APOMO95445 188 aa6.11□□□□□ -1.43
RNF4-221ENST00000513643 FABP9Q0Z7S8 132 aa6.11□□□□□ -1.43
RNF4-221ENST00000513643 TEX43Q6ZNM6 134 aa6.11□□□□□ -1.43
RNF4-221ENST00000513643 ERASQ7Z444 233 aa6.11□□□□□ -1.43
RNF4-221ENST00000513643 URB1-AS1Q96HZ7 61 aa6.11□□□□□ -1.43
RNF4-221ENST00000513643 TNXBP22105 4242 aa6.1□□□□□ -1.43
RNF4-221ENST00000513643 LINC01549A6NIU2 74 aa6.1□□□□□ -1.43
RNF4-221ENST00000513643 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.1□□□□□ -1.43
RNF4-221ENST00000513643 PTTG1IPP53801 180 aa6.1□□□□□ -1.43
RNF4-221ENST00000513643 SPAG11BQ08648 103 aa6.1□□□□□ -1.43
RNF4-221ENST00000513643 VCX2Q9H322 139 aa6.1□□□□□ -1.43
RNF4-221ENST00000513643 MRPL35Q9NZE8 188 aaKnown RBP6.1□□□□□ -1.43
RNF4-221ENST00000513643 LINC00474Q9P2X8 69 aa6.1□□□□□ -1.43
RNF4-221ENST00000513643 PKIGQ9Y2B9 76 aa6.1□□□□□ -1.43
RNF4-221ENST00000513643 A0A096LNJ9 63 aa6.09□□□□□ -1.43
RNF4-221ENST00000513643 KRTAP29-1A8MX34 341 aaPredicted RBP6.09□□□□□ -1.43
RNF4-221ENST00000513643 TLX1NBP0CAT3 122 aa6.09□□□□□ -1.43
RNF4-221ENST00000513643 HNRNPA3P51991 378 aaKnown RBP6.09□□□□□ -1.43
RNF4-221ENST00000513643 NDUFA5Q16718 116 aa6.09□□□□□ -1.43
RNF4-221ENST00000513643 C10orf25Q5T742 122 aa6.09□□□□□ -1.43
RNF4-221ENST00000513643 C18orf32Q8TCD1 76 aa6.09□□□□□ -1.43
RNF4-221ENST00000513643 CAMK2N2Q96S95 79 aa6.09□□□□□ -1.43
RNF4-221ENST00000513643 HMCN2Q8NDA2 5059 aa6.08□□□□□ -1.44
RNF4-221ENST00000513643 LOC107984640A0A0U1RRK4 108 aa6.08□□□□□ -1.44
RNF4-221ENST00000513643 RPL37AP61513 92 aaKnown RBP6.08□□□□□ -1.44
RNF4-221ENST00000513643 MAJINQ3KP22 176 aa6.08□□□□□ -1.44
RNF4-221ENST00000513643 PAPPA-AS1Q5QFB9 102 aa6.08□□□□□ -1.44
RNF4-221ENST00000513643 Q6ZN92 141 aa6.08□□□□□ -1.44
RNF4-221ENST00000513643 ORAOV1Q8WV07 137 aa6.08□□□□□ -1.44
RNF4-221ENST00000513643 C2orf88Q9BSF0 95 aa6.08□□□□□ -1.44
RNF4-221ENST00000513643 TRAPPC1Q9Y5R8 145 aa6.08□□□□□ -1.44
RNF4-221ENST00000513643 IGLV5-45A0A087WSX0 123 aa6.07□□□□□ -1.44
RNF4-221ENST00000513643 IGKV2-24A0A0C4DH68 120 aa6.07□□□□□ -1.44
RNF4-221ENST00000513643 UNQ6190/PRO20217Q6UXQ8 127 aa6.07□□□□□ -1.44
RNF4-221ENST00000513643 STPG4Q8N801 248 aa6.07□□□□□ -1.44
RNF4-221ENST00000513643 SCGB3A1Q96QR1 104 aa6.07□□□□□ -1.44
RNF4-221ENST00000513643 CST9LQ9H4G1 147 aa6.07□□□□□ -1.44
RNF4-221ENST00000513643 C6orf48Q9UBA6 75 aa6.07□□□□□ -1.44
RNF4-221ENST00000513643 A0A0J9YXV3 536 aa6.06□□□□□ -1.44
RNF4-221ENST00000513643 A0A1W2PNN7 141 aa6.06□□□□□ -1.44
RNF4-221ENST00000513643 LINC00614P0C842 121 aa6.06□□□□□ -1.44
RNF4-221ENST00000513643 HERVK_113P63121 156 aa6.06□□□□□ -1.44
RNF4-221ENST00000513643 SEC11AP67812 179 aa6.06□□□□□ -1.44
RNF4-221ENST00000513643 DPH3Q96FX2 82 aa6.06□□□□□ -1.44
RNF4-221ENST00000513643 CDKN2A-AS1Q9UH64 79 aa6.06□□□□□ -1.44
RNF4-221ENST00000513643 TINCRA0A1B0GVN0 87 aa6.05□□□□□ -1.44
RNF4-221ENST00000513643 NDUFA1O15239 70 aa6.05□□□□□ -1.44
RNF4-221ENST00000513643 PDZD11Q5EBL8 140 aa6.05□□□□□ -1.44
RNF4-221ENST00000513643 Q6ZRP5 223 aa6.05□□□□□ -1.44
RNF4-221ENST00000513643 FA2HQ7L5A8 372 aa6.05□□□□□ -1.44
RNF4-221ENST00000513643 SLC7A5P1Q8MH63 180 aa6.05□□□□□ -1.44
RNF4-221ENST00000513643 TRBV30A0A0K0K1B3 111 aa6.04□□□□□ -1.44
RNF4-221ENST00000513643 OXTP01178 125 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms