RNA–Protein interactions for RNA: ENST00000513367.1

SRPK1-213, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-213ENST00000513367 VCX3AQ9NNX9 186 aa3.25□□□□□ -1.89
SRPK1-213ENST00000513367 CDC42SE2Q9NRR3 84 aa3.25□□□□□ -1.89
SRPK1-213ENST00000513367 RPL37AP8A6NKH3 93 aa3.24□□□□□ -1.89
SRPK1-213ENST00000513367 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
SRPK1-213ENST00000513367 NCR2O95944 276 aa3.24□□□□□ -1.89
SRPK1-213ENST00000513367 MT2AP02795 61 aa3.24□□□□□ -1.89
SRPK1-213ENST00000513367 CXCL1P09341 107 aa3.24□□□□□ -1.89
SRPK1-213ENST00000513367 STAG3L2P0CL84 134 aa3.24□□□□□ -1.89
SRPK1-213ENST00000513367 STAG3L3P0CL85 134 aa3.24□□□□□ -1.89
SRPK1-213ENST00000513367 DEFA1P59665 94 aa3.24□□□□□ -1.89
SRPK1-213ENST00000513367 IL15RAQ13261 267 aa3.24□□□□□ -1.89
SRPK1-213ENST00000513367 PYDC2Q56P42 97 aa3.24□□□□□ -1.89
SRPK1-213ENST00000513367 Q6Q795 121 aa3.24□□□□□ -1.89
SRPK1-213ENST00000513367 Q8NBF4 154 aa3.24□□□□□ -1.89
SRPK1-213ENST00000513367 SCGB1C1Q8TD33 95 aa3.24□□□□□ -1.89
SRPK1-213ENST00000513367 MARVELD1Q9BSK0 173 aa3.24□□□□□ -1.89
SRPK1-213ENST00000513367 Q9H521 79 aa3.24□□□□□ -1.89
SRPK1-213ENST00000513367 TRAV13-1A0A0B4J241 112 aa3.23□□□□□ -1.89
SRPK1-213ENST00000513367 NDUFC2-KCTD14E9PQ53 114 aa3.23□□□□□ -1.89
SRPK1-213ENST00000513367 F8WDY8 70 aa3.23□□□□□ -1.89
SRPK1-213ENST00000513367 CDC34P49427 236 aaPredicted RBP3.23□□□□□ -1.89
SRPK1-213ENST00000513367 UBE2G1P62253 170 aa3.23□□□□□ -1.89
SRPK1-213ENST00000513367 RNASE13Q5GAN3 156 aaKnown RBP3.23□□□□□ -1.89
SRPK1-213ENST00000513367 MRPL55Q7Z7F7 128 aaKnown RBP3.23□□□□□ -1.89
SRPK1-213ENST00000513367 SMIM29Q86T20 159 aa3.23□□□□□ -1.89
SRPK1-213ENST00000513367 LINC00469Q8N7U9 141 aa3.23□□□□□ -1.89
SRPK1-213ENST00000513367 PACRGQ96M98 296 aaPredicted RBP3.23□□□□□ -1.89
SRPK1-213ENST00000513367 A0A087WXM4 84 aa3.22□□□□□ -1.89
SRPK1-213ENST00000513367 C9orf92A6NGG3 77 aa3.22□□□□□ -1.89
SRPK1-213ENST00000513367 SPINK1P00995 79 aa3.22□□□□□ -1.89
SRPK1-213ENST00000513367 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
SRPK1-213ENST00000513367 UBE2G2P60604 165 aa3.22□□□□□ -1.89
SRPK1-213ENST00000513367 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
SRPK1-213ENST00000513367 Q8N377 158 aa3.22□□□□□ -1.89
SRPK1-213ENST00000513367 GATD1Q8NB37 220 aa3.22□□□□□ -1.89
SRPK1-213ENST00000513367 RPL39LQ96EH5 51 aaKnown RBP3.22□□□□□ -1.89
SRPK1-213ENST00000513367 LINC00167Q96N53 147 aa3.22□□□□□ -1.89
SRPK1-213ENST00000513367 TPPP3Q9BW30 176 aa3.22□□□□□ -1.89
SRPK1-213ENST00000513367 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
SRPK1-213ENST00000513367 SMIM3Q9BZL3 60 aa3.22□□□□□ -1.89
SRPK1-213ENST00000513367 CYTL1Q9NRR1 136 aa3.22□□□□□ -1.89
SRPK1-213ENST00000513367 TMEM167BQ9NRX6 74 aa3.22□□□□□ -1.89
SRPK1-213ENST00000513367 A0A1W2PRE2 83 aa3.21□□□□□ -1.9
SRPK1-213ENST00000513367 LTAP01374 205 aa3.21□□□□□ -1.9
SRPK1-213ENST00000513367 MT1FP04733 61 aa3.21□□□□□ -1.9
SRPK1-213ENST00000513367 PMCHP20382 165 aa3.21□□□□□ -1.9
SRPK1-213ENST00000513367 PRLHP81277 87 aa3.21□□□□□ -1.9
SRPK1-213ENST00000513367 C2orf82Q6UX34 121 aa3.21□□□□□ -1.9
SRPK1-213ENST00000513367 Q75L30 129 aa3.21□□□□□ -1.9
SRPK1-213ENST00000513367 FAM19A2Q8N3H0 131 aa3.21□□□□□ -1.9
SRPK1-213ENST00000513367 DEDD2Q8WXF8 326 aa3.21□□□□□ -1.9
SRPK1-213ENST00000513367 HIST1H2BAQ96A08 127 aa3.21□□□□□ -1.9
SRPK1-213ENST00000513367 FMC1Q96HJ9 113 aa3.21□□□□□ -1.9
SRPK1-213ENST00000513367 XAGE1AQ9HD64 81 aa3.21□□□□□ -1.9
SRPK1-213ENST00000513367 MDN1Q9NU22 5596 aa3.2□□□□□ -1.9
SRPK1-213ENST00000513367 SDHAF1A6NFY7 115 aa3.2□□□□□ -1.9
SRPK1-213ENST00000513367 CXorf1O96002 111 aa3.2□□□□□ -1.9
SRPK1-213ENST00000513367 FOXA3P55318 350 aaPredicted RBP3.2□□□□□ -1.9
SRPK1-213ENST00000513367 RPL24P83731 157 aaKnown RBP3.2□□□□□ -1.9
SRPK1-213ENST00000513367 MRPL52Q86TS9 123 aaKnown RBP3.2□□□□□ -1.9
SRPK1-213ENST00000513367 PLEKHB2Q96CS7 222 aa3.2□□□□□ -1.9
SRPK1-213ENST00000513367 MRAP2Q96G30 205 aa3.2□□□□□ -1.9
SRPK1-213ENST00000513367 SEC22CQ9BRL7 303 aa3.2□□□□□ -1.9
SRPK1-213ENST00000513367 TRBV30A0A0K0K1B3 111 aa3.19□□□□□ -1.9
SRPK1-213ENST00000513367 ZNF727A8MUV8 499 aa3.19□□□□□ -1.9
SRPK1-213ENST00000513367 SLC25A20O43772 301 aa3.19□□□□□ -1.9
SRPK1-213ENST00000513367 UPK1BO75841 260 aa3.19□□□□□ -1.9
SRPK1-213ENST00000513367 TRGC1P0CF51 173 aa3.19□□□□□ -1.9
SRPK1-213ENST00000513367 KRTAP10-10P60014 251 aa3.19□□□□□ -1.9
SRPK1-213ENST00000513367 PNRC1Q12796 327 aaPredicted RBP3.19□□□□□ -1.9
SRPK1-213ENST00000513367 KIAA0087Q14695 138 aa3.19□□□□□ -1.9
SRPK1-213ENST00000513367 MZT2BQ6NZ67 158 aa3.19□□□□□ -1.9
SRPK1-213ENST00000513367 TMEM242Q9NWH2 141 aa3.19□□□□□ -1.9
SRPK1-213ENST00000513367 TP73-AS1Q9UF72 201 aa3.19□□□□□ -1.9
SRPK1-213ENST00000513367 HSPB11Q9Y547 144 aa3.19□□□□□ -1.9
SRPK1-213ENST00000513367 NAP1L6A6NFF2 107 aa3.18□□□□□ -1.9
SRPK1-213ENST00000513367 FAM74A7A6NL05 159 aa3.18□□□□□ -1.9
SRPK1-213ENST00000513367 I3L3M4 83 aa3.18□□□□□ -1.9
SRPK1-213ENST00000513367 IGLC6P0CF74 106 aa3.18□□□□□ -1.9
SRPK1-213ENST00000513367 BTCP35070 178 aa3.18□□□□□ -1.9
SRPK1-213ENST00000513367 LYZL1Q6UWQ5 148 aa3.18□□□□□ -1.9
SRPK1-213ENST00000513367 V9GYH0 126 aa3.18□□□□□ -1.9
SRPK1-213ENST00000513367 GPR98Q8WXG9 6306 aa3.17□□□□□ -1.9
SRPK1-213ENST00000513367 IGLV5-45A0A087WSX0 123 aa3.17□□□□□ -1.9
SRPK1-213ENST00000513367 IGHV3OR16-9A0A0B4J2B5 98 aa3.17□□□□□ -1.9
SRPK1-213ENST00000513367 INMT-MINDY4F8WBC2 141 aa3.17□□□□□ -1.9
SRPK1-213ENST00000513367 SIX6O95475 246 aa3.17□□□□□ -1.9
SRPK1-213ENST00000513367 AKR1C3P42330 323 aa3.17□□□□□ -1.9
SRPK1-213ENST00000513367 RPL32P62910 135 aaKnown RBP3.17□□□□□ -1.9
SRPK1-213ENST00000513367 Q6ZUT4 128 aa3.17□□□□□ -1.9
SRPK1-213ENST00000513367 FAM19A1Q7Z5A9 133 aa3.17□□□□□ -1.9
SRPK1-213ENST00000513367 RNASE7Q9H1E1 156 aaKnown RBP3.17□□□□□ -1.9
SRPK1-213ENST00000513367 C7orf77A4D0Y5 90 aa3.16□□□□□ -1.9
SRPK1-213ENST00000513367 LGALS3P17931 250 aaKnown RBP3.16□□□□□ -1.9
SRPK1-213ENST00000513367 CBLN2Q8IUK8 224 aa3.16□□□□□ -1.9
SRPK1-213ENST00000513367 SPRR4Q96PI1 79 aa3.16□□□□□ -1.9
SRPK1-213ENST00000513367 NKX6-2Q9C056 277 aaPredicted RBP3.16□□□□□ -1.9
SRPK1-213ENST00000513367 ACTR3CQ9C0K3 210 aaPredicted RBP3.16□□□□□ -1.9
SRPK1-213ENST00000513367 IGKV2-28A0A075B6P5 120 aa3.15□□□□□ -1.91
SRPK1-213ENST00000513367 SCO1O75880 301 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms