RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 LINC01561Q8N1V8 128 aa3.7□□□□□ -1.82
LSM3P4-201ENST00000502948 FAM104AQ969W3 186 aa3.7□□□□□ -1.82
LSM3P4-201ENST00000502948 SMIM7Q9BQ49 75 aa3.7□□□□□ -1.82
LSM3P4-201ENST00000502948 CARHSP1Q9Y2V2 147 aaKnown RBP3.7□□□□□ -1.82
LSM3P4-201ENST00000502948 PYGO1Q9Y3Y4 419 aa3.7□□□□□ -1.82
LSM3P4-201ENST00000502948 A0A087WZ39 114 aa3.69□□□□□ -1.82
LSM3P4-201ENST00000502948 TRAV13-1A0A0B4J241 112 aa3.69□□□□□ -1.82
LSM3P4-201ENST00000502948 TRBV30A0A0K0K1B3 111 aa3.69□□□□□ -1.82
LSM3P4-201ENST00000502948 TMEM238LA0A1B0GVL6 79 aa3.69□□□□□ -1.82
LSM3P4-201ENST00000502948 SMIM27A0A1W2PRY6 76 aa3.69□□□□□ -1.82
LSM3P4-201ENST00000502948 PRSS47A8MTI9 375 aa3.69□□□□□ -1.82
LSM3P4-201ENST00000502948 ZNF727A8MUV8 499 aa3.69□□□□□ -1.82
LSM3P4-201ENST00000502948 PPBPP02775 128 aa3.69□□□□□ -1.82
LSM3P4-201ENST00000502948 S100A8P05109 93 aa3.69□□□□□ -1.82
LSM3P4-201ENST00000502948 NPSP0C0P6 89 aa3.69□□□□□ -1.82
LSM3P4-201ENST00000502948 KRTAP1-4P0C5Y4 121 aa3.69□□□□□ -1.82
LSM3P4-201ENST00000502948 RPL18AQ02543 176 aaKnown RBP3.69□□□□□ -1.82
LSM3P4-201ENST00000502948 MRPL51Q4U2R6 128 aaKnown RBP3.69□□□□□ -1.82
LSM3P4-201ENST00000502948 SMDT1Q9H4I9 107 aa3.69□□□□□ -1.82
LSM3P4-201ENST00000502948 SRP19P09132 144 aaKnown RBP3.68□□□□□ -1.82
LSM3P4-201ENST00000502948 HBBP68871 147 aa3.68□□□□□ -1.82
LSM3P4-201ENST00000502948 KIAA0087Q14695 138 aa3.68□□□□□ -1.82
LSM3P4-201ENST00000502948 Q6ZUT4 128 aa3.68□□□□□ -1.82
LSM3P4-201ENST00000502948 PHF5AQ7RTV0 110 aaKnown RBP3.68□□□□□ -1.82
LSM3P4-201ENST00000502948 C5orf38Q86SI9 138 aa3.68□□□□□ -1.82
LSM3P4-201ENST00000502948 ORAOV1Q8WV07 137 aa3.68□□□□□ -1.82
LSM3P4-201ENST00000502948 SMIM2Q9BVW6 85 aa3.68□□□□□ -1.82
LSM3P4-201ENST00000502948 EIF5A2Q9GZV4 153 aaKnown RBP3.68□□□□□ -1.82
LSM3P4-201ENST00000502948 C6orf48Q9UBA6 75 aa3.68□□□□□ -1.82
LSM3P4-201ENST00000502948 A0A0U1RQV1 116 aa3.67□□□□□ -1.82
LSM3P4-201ENST00000502948 NDUFC2-KCTD14E9PQ53 114 aa3.67□□□□□ -1.82
LSM3P4-201ENST00000502948 F8W036 122 aa3.67□□□□□ -1.82
LSM3P4-201ENST00000502948 K7EMI3 77 aa3.67□□□□□ -1.82
LSM3P4-201ENST00000502948 NUPR1O60356 82 aa3.67□□□□□ -1.82
LSM3P4-201ENST00000502948 TNFRSF6BO95407 300 aa3.67□□□□□ -1.82
LSM3P4-201ENST00000502948 CKS2P33552 79 aa3.67□□□□□ -1.82
LSM3P4-201ENST00000502948 CTAG1AP78358 180 aa3.67□□□□□ -1.82
LSM3P4-201ENST00000502948 ALKAL2Q6UX46 152 aa3.67□□□□□ -1.82
LSM3P4-201ENST00000502948 FAM19A3Q7Z5A8 133 aa3.67□□□□□ -1.82
LSM3P4-201ENST00000502948 KRTAP7-1Q8IUC3 87 aa3.67□□□□□ -1.82
LSM3P4-201ENST00000502948 PRR26Q8N8Z3 221 aa3.67□□□□□ -1.82
LSM3P4-201ENST00000502948 OPRPNQ99935 248 aaPredicted RBP3.67□□□□□ -1.82
LSM3P4-201ENST00000502948 LAMTOR2Q9Y2Q5 125 aa3.67□□□□□ -1.82
LSM3P4-201ENST00000502948 TGIF2-C20orf24A0A0A6YYL0 155 aa3.66□□□□□ -1.82
LSM3P4-201ENST00000502948 A0A1B0GXF2 115 aa3.66□□□□□ -1.82
LSM3P4-201ENST00000502948 SMKR1H3BMG3 65 aa3.66□□□□□ -1.82
LSM3P4-201ENST00000502948 ZNF861PO60384 105 aa3.66□□□□□ -1.82
LSM3P4-201ENST00000502948 IFI27P40305 119 aaPredicted RBP3.66□□□□□ -1.82
LSM3P4-201ENST00000502948 RPL23P62829 140 aaKnown RBP3.66□□□□□ -1.82
LSM3P4-201ENST00000502948 RPL39P62891 51 aaKnown RBP3.66□□□□□ -1.82
LSM3P4-201ENST00000502948 RNASE13Q5GAN3 156 aaKnown RBP3.66□□□□□ -1.82
LSM3P4-201ENST00000502948 LINC00242Q5T6M2 205 aa3.66□□□□□ -1.82
LSM3P4-201ENST00000502948 C10orf25Q5T742 122 aa3.66□□□□□ -1.82
LSM3P4-201ENST00000502948 ATP5L2Q7Z4Y8 100 aa3.66□□□□□ -1.82
LSM3P4-201ENST00000502948 NAT8Q9UHE5 227 aa3.66□□□□□ -1.82
LSM3P4-201ENST00000502948 FAM168BA1KXE4 195 aa3.65□□□□□ -1.83
LSM3P4-201ENST00000502948 IFITM10A6NMD0 228 aa3.65□□□□□ -1.83
LSM3P4-201ENST00000502948 M0QXV9 152 aa3.65□□□□□ -1.83
LSM3P4-201ENST00000502948 CEBPGP53567 150 aa3.65□□□□□ -1.83
LSM3P4-201ENST00000502948 UNQ6190/PRO20217Q6UXQ8 127 aa3.65□□□□□ -1.83
LSM3P4-201ENST00000502948 AKAP14Q86UN6 197 aa3.65□□□□□ -1.83
LSM3P4-201ENST00000502948 KRTAP11-1Q8IUC1 163 aa3.65□□□□□ -1.83
LSM3P4-201ENST00000502948 PACRGQ96M98 296 aaPredicted RBP3.65□□□□□ -1.83
LSM3P4-201ENST00000502948 TP73-AS1Q9UF72 201 aa3.65□□□□□ -1.83
LSM3P4-201ENST00000502948 IGLV4-3A0A075B6K6 122 aa3.64□□□□□ -1.83
LSM3P4-201ENST00000502948 D6R8Y8 96 aa3.64□□□□□ -1.83
LSM3P4-201ENST00000502948 RAB5AP20339 215 aa3.64□□□□□ -1.83
LSM3P4-201ENST00000502948 UBE2D1P51668 147 aa3.64□□□□□ -1.83
LSM3P4-201ENST00000502948 C9orf129Q5T035 196 aaKnown RBP3.64□□□□□ -1.83
LSM3P4-201ENST00000502948 LCE2AQ5TA79 106 aaPredicted RBP3.64□□□□□ -1.83
LSM3P4-201ENST00000502948 TEX43Q6ZNM6 134 aa3.64□□□□□ -1.83
LSM3P4-201ENST00000502948 Q8IZM0 81 aa3.64□□□□□ -1.83
LSM3P4-201ENST00000502948 ORMDL3Q8N138 153 aa3.64□□□□□ -1.83
LSM3P4-201ENST00000502948 TMEM141Q96I45 108 aa3.64□□□□□ -1.83
LSM3P4-201ENST00000502948 AMELXQ99217 191 aa3.64□□□□□ -1.83
LSM3P4-201ENST00000502948 MUC2Q02817 5179 aa3.64□□□□□ -1.83
LSM3P4-201ENST00000502948 NPYP01303 97 aa3.63□□□□□ -1.83
LSM3P4-201ENST00000502948 G0S2P27469 103 aa3.63□□□□□ -1.83
LSM3P4-201ENST00000502948 UBE2BP63146 152 aa3.63□□□□□ -1.83
LSM3P4-201ENST00000502948 SEC11AP67812 179 aa3.63□□□□□ -1.83
LSM3P4-201ENST00000502948 GAGE2EQ4V326 116 aa3.63□□□□□ -1.83
LSM3P4-201ENST00000502948 LBHQ53QV2 105 aaPredicted RBP3.63□□□□□ -1.83
LSM3P4-201ENST00000502948 Q6ZN92 141 aa3.63□□□□□ -1.83
LSM3P4-201ENST00000502948 FAM19A5Q7Z5A7 132 aaPredicted RBP3.63□□□□□ -1.83
LSM3P4-201ENST00000502948 C2orf88Q9BSF0 95 aa3.63□□□□□ -1.83
LSM3P4-201ENST00000502948 GAGE2DQ9UEU5 116 aa3.63□□□□□ -1.83
LSM3P4-201ENST00000502948 CXCL5P42830 114 aa3.62□□□□□ -1.83
LSM3P4-201ENST00000502948 PEA15Q15121 130 aa3.62□□□□□ -1.83
LSM3P4-201ENST00000502948 ADIRFQ15847 76 aa3.62□□□□□ -1.83
LSM3P4-201ENST00000502948 ORMDL2Q53FV1 153 aa3.62□□□□□ -1.83
LSM3P4-201ENST00000502948 PAPPA-AS1Q5QFB9 102 aa3.62□□□□□ -1.83
LSM3P4-201ENST00000502948 C2orf66Q6UXQ4 117 aa3.62□□□□□ -1.83
LSM3P4-201ENST00000502948 TMEM136Q6ZRR5 245 aa3.62□□□□□ -1.83
LSM3P4-201ENST00000502948 CYSLTR1Q9Y271 337 aa3.62□□□□□ -1.83
LSM3P4-201ENST00000502948 C22orf24Q9Y442 160 aa3.62□□□□□ -1.83
LSM3P4-201ENST00000502948 LINC01549A6NIU2 74 aa3.61□□□□□ -1.83
LSM3P4-201ENST00000502948 IGIPA6NJ69 53 aa3.61□□□□□ -1.83
LSM3P4-201ENST00000502948 C9JQL5 133 aa3.61□□□□□ -1.83
LSM3P4-201ENST00000502948 F8VRH5 84 aa3.61□□□□□ -1.83
LSM3P4-201ENST00000502948 RPL28P46779 137 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms