RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 CCL25O15444 150 aa14.53□□□□□ -0.08
CDKN2A-208ENST00000498124 LINC00614P0C842 121 aa14.53□□□□□ -0.08
CDKN2A-208ENST00000498124 TOMM6Q96B49 74 aa14.53□□□□□ -0.08
CDKN2A-208ENST00000498124 GAGE12HA6NDE8 117 aa14.52□□□□□ -0.09
CDKN2A-208ENST00000498124 NPSP0C0P6 89 aa14.52□□□□□ -0.09
CDKN2A-208ENST00000498124 FAM104AQ969W3 186 aa14.52□□□□□ -0.09
CDKN2A-208ENST00000498124 OPRPNQ99935 248 aaPredicted RBP14.52□□□□□ -0.09
CDKN2A-208ENST00000498124 C1orf196B1AJZ1 125 aa14.51□□□□□ -0.09
CDKN2A-208ENST00000498124 TMEM141Q96I45 108 aa14.51□□□□□ -0.09
CDKN2A-208ENST00000498124 IGLV4-3A0A075B6K6 122 aa14.5□□□□□ -0.09
CDKN2A-208ENST00000498124 TRAV13-1A0A0B4J241 112 aa14.5□□□□□ -0.09
CDKN2A-208ENST00000498124 IGIPA6NJ69 53 aa14.5□□□□□ -0.09
CDKN2A-208ENST00000498124 Q6ZN92 141 aa14.5□□□□□ -0.09
CDKN2A-208ENST00000498124 C9orf163Q8N9P6 203 aa14.5□□□□□ -0.09
CDKN2A-208ENST00000498124 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.5□□□□□ -0.09
CDKN2A-208ENST00000498124 PANO1I0J062 215 aa14.49□□□□□ -0.09
CDKN2A-208ENST00000498124 XCL1P47992 114 aa14.49□□□□□ -0.09
CDKN2A-208ENST00000498124 PAPPA-AS1Q5QFB9 102 aa14.49□□□□□ -0.09
CDKN2A-208ENST00000498124 URB1-AS1Q96HZ7 61 aa14.49□□□□□ -0.09
CDKN2A-208ENST00000498124 TIMM17AQ99595 171 aa14.49□□□□□ -0.09
CDKN2A-208ENST00000498124 IFITM10A6NMD0 228 aa14.48□□□□□ -0.09
CDKN2A-208ENST00000498124 CD164L2Q6UWJ8 174 aa14.48□□□□□ -0.09
CDKN2A-208ENST00000498124 SCGB3A1Q96QR1 104 aa14.48□□□□□ -0.09
CDKN2A-208ENST00000498124 HNRNPA3P51991 378 aaKnown RBP14.47□□□□□ -0.09
CDKN2A-208ENST00000498124 FOXI1Q12951 378 aa14.47□□□□□ -0.09
CDKN2A-208ENST00000498124 TEX43Q6ZNM6 134 aa14.47□□□□□ -0.09
CDKN2A-208ENST00000498124 ERASQ7Z444 233 aa14.47□□□□□ -0.09
CDKN2A-208ENST00000498124 CHCHD1Q96BP2 118 aaKnown RBP14.47□□□□□ -0.09
CDKN2A-208ENST00000498124 VCX2Q9H322 139 aa14.47□□□□□ -0.09
CDKN2A-208ENST00000498124 CFAP161Q6P656 301 aa14.46□□□□□ -0.09
CDKN2A-208ENST00000498124 BAGE3Q86Y29 109 aa14.46□□□□□ -0.09
CDKN2A-208ENST00000498124 C2orf88Q9BSF0 95 aa14.46□□□□□ -0.09
CDKN2A-208ENST00000498124 OXTP01178 125 aa14.45□□□□□ -0.1
CDKN2A-208ENST00000498124 RPL37AP61513 92 aaKnown RBP14.45□□□□□ -0.1
CDKN2A-208ENST00000498124 SDIM1Q6ZPB5 146 aa14.45□□□□□ -0.1
CDKN2A-208ENST00000498124 HBDP02042 147 aa14.44□□□□□ -0.1
CDKN2A-208ENST00000498124 CNBPP62633 177 aaKnown RBP14.44□□□□□ -0.1
CDKN2A-208ENST00000498124 AMELXQ99217 191 aa14.44□□□□□ -0.1
CDKN2A-208ENST00000498124 A0A096LNJ9 63 aa14.41□□□□□ -0.1
CDKN2A-208ENST00000498124 SLPIP03973 132 aa14.41□□□□□ -0.1
CDKN2A-208ENST00000498124 CIRBPQ14011 172 aaKnown RBP14.41□□□□□ -0.1
CDKN2A-208ENST00000498124 LINC00173Q6ZV60 143 aa14.41□□□□□ -0.1
CDKN2A-208ENST00000498124 COX7A2LO14548 114 aa14.4□□□□□ -0.1
CDKN2A-208ENST00000498124 PMCHL1Q16048 86 aa14.4□□□□□ -0.1
CDKN2A-208ENST00000498124 hDV102S1A0JD36 115 aa14.39□□□□□ -0.11
CDKN2A-208ENST00000498124 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.39□□□□□ -0.11
CDKN2A-208ENST00000498124 HSBP1O75506 76 aa14.39□□□□□ -0.11
CDKN2A-208ENST00000498124 MALP21145 153 aa14.39□□□□□ -0.11
CDKN2A-208ENST00000498124 UBE2D1P51668 147 aa14.39□□□□□ -0.11
CDKN2A-208ENST00000498124 ZC2HC1BQ5TFG8 222 aa14.39□□□□□ -0.11
CDKN2A-208ENST00000498124 IGHV1-58A0A0C4DH39 117 aa14.38□□□□□ -0.11
CDKN2A-208ENST00000498124 PDZD11Q5EBL8 140 aa14.38□□□□□ -0.11
CDKN2A-208ENST00000498124 C15orf56Q8N910 161 aa14.38□□□□□ -0.11
CDKN2A-208ENST00000498124 UBR4Q5T4S7 5183 aa14.38□□□□□ -0.11
CDKN2A-208ENST00000498124 ATP5LO75964 103 aa14.37□□□□□ -0.11
CDKN2A-208ENST00000498124 LINC00242Q5T6M2 205 aa14.37□□□□□ -0.11
CDKN2A-208ENST00000498124 SERF1AO75920 110 aa14.36□□□□□ -0.11
CDKN2A-208ENST00000498124 SEC11AP67812 179 aa14.36□□□□□ -0.11
CDKN2A-208ENST00000498124 C5orf38Q86SI9 138 aa14.36□□□□□ -0.11
CDKN2A-208ENST00000498124 GVQW2A0A096LPI5 108 aaPredicted RBP14.35□□□□□ -0.11
CDKN2A-208ENST00000498124 IGHV3OR16-9A0A0B4J2B5 98 aa14.35□□□□□ -0.11
CDKN2A-208ENST00000498124 PMVKQ15126 192 aa14.35□□□□□ -0.11
CDKN2A-208ENST00000498124 SERTAD4-AS1Q5TG53 156 aa14.35□□□□□ -0.11
CDKN2A-208ENST00000498124 FAM19A3Q7Z5A8 133 aa14.35□□□□□ -0.11
CDKN2A-208ENST00000498124 HIST1H2BKO60814 126 aa14.34□□□□□ -0.11
CDKN2A-208ENST00000498124 APOMO95445 188 aa14.34□□□□□ -0.11
CDKN2A-208ENST00000498124 HIST1H2BJP06899 126 aa14.34□□□□□ -0.11
CDKN2A-208ENST00000498124 CHTF8P0CG12 524 aa14.34□□□□□ -0.11
CDKN2A-208ENST00000498124 HIST1H2BOP23527 126 aa14.34□□□□□ -0.11
CDKN2A-208ENST00000498124 HIST1H2BBP33778 126 aa14.34□□□□□ -0.11
CDKN2A-208ENST00000498124 HIST1H2BDP58876 126 aa14.34□□□□□ -0.11
CDKN2A-208ENST00000498124 HIST1H2BCP62807 126 aa14.34□□□□□ -0.11
CDKN2A-208ENST00000498124 HIST2H2BEQ16778 126 aa14.34□□□□□ -0.11
CDKN2A-208ENST00000498124 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.34□□□□□ -0.11
CDKN2A-208ENST00000498124 HIST1H2BHQ93079 126 aa14.34□□□□□ -0.11
CDKN2A-208ENST00000498124 HIST1H2BNQ99877 126 aa14.34□□□□□ -0.11
CDKN2A-208ENST00000498124 HIST1H2BMQ99879 126 aa14.34□□□□□ -0.11
CDKN2A-208ENST00000498124 CST9LQ9H4G1 147 aa14.34□□□□□ -0.11
CDKN2A-208ENST00000498124 HIGD2BQ4VC39 106 aa14.33□□□□□ -0.12
CDKN2A-208ENST00000498124 IGHV3-64A0A075B6Q5 118 aa14.32□□□□□ -0.12
CDKN2A-208ENST00000498124 LINC00310P59036 64 aa14.32□□□□□ -0.12
CDKN2A-208ENST00000498124 COX6A2Q02221 97 aa14.32□□□□□ -0.12
CDKN2A-208ENST00000498124 SPACA4Q8TDM5 124 aa14.32□□□□□ -0.12
CDKN2A-208ENST00000498124 HERVK_113P63121 156 aa14.31□□□□□ -0.12
CDKN2A-208ENST00000498124 FAM19A2Q8N3H0 131 aa14.31□□□□□ -0.12
CDKN2A-208ENST00000498124 GEMIN7Q9H840 131 aaKnown RBP14.31□□□□□ -0.12
CDKN2A-208ENST00000498124 A0A087WZ39 114 aa14.3□□□□□ -0.12
CDKN2A-208ENST00000498124 ZNF561-AS1K7EIQ3 104 aa14.3□□□□□ -0.12
CDKN2A-208ENST00000498124 NDUFA6P56556 154 aa14.3□□□□□ -0.12
CDKN2A-208ENST00000498124 A0A087WYN8 130 aa14.29□□□□□ -0.12
CDKN2A-208ENST00000498124 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.29□□□□□ -0.12
CDKN2A-208ENST00000498124 A0A0J9YXV3 536 aa14.29□□□□□ -0.12
CDKN2A-208ENST00000498124 LINC01561Q8N1V8 128 aa14.29□□□□□ -0.12
CDKN2A-208ENST00000498124 MT1HL1P0DM35 61 aa14.28□□□□□ -0.12
CDKN2A-208ENST00000498124 TNXBP22105 4242 aa14.28□□□□□ -0.12
CDKN2A-208ENST00000498124 TINCRA0A1B0GVN0 87 aa14.27□□□□□ -0.13
CDKN2A-208ENST00000498124 NUPR1O60356 82 aa14.27□□□□□ -0.13
CDKN2A-208ENST00000498124 OR10D4PQ8NGN7 298 aa14.27□□□□□ -0.13
CDKN2A-208ENST00000498124 IFI27L1Q96BM0 104 aa14.27□□□□□ -0.13
CDKN2A-208ENST00000498124 LEPROTL1O95214 131 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms