RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 RNASE7Q9H1E1 156 aaKnown RBP2.58□□□□□ -2
SMG7-208ENST00000493609 RBM12B-AS1Q9P1G2 102 aa2.58□□□□□ -2
SMG7-208ENST00000493609 TRAPPC1Q9Y5R8 145 aa2.58□□□□□ -2
SMG7-208ENST00000493609 TMEM189A5PLL7 270 aa2.57□□□□□ -2
SMG7-208ENST00000493609 SMIM9A6NGZ8 99 aa2.57□□□□□ -2
SMG7-208ENST00000493609 LINC01549A6NIU2 74 aa2.57□□□□□ -2
SMG7-208ENST00000493609 K7EMI3 77 aa2.57□□□□□ -2
SMG7-208ENST00000493609 PPBPP02775 128 aa2.57□□□□□ -2
SMG7-208ENST00000493609 GPX1P07203 203 aa2.57□□□□□ -2
SMG7-208ENST00000493609 TRGC1P0CF51 173 aa2.57□□□□□ -2
SMG7-208ENST00000493609 MGST1P10620 155 aaKnown RBP2.57□□□□□ -2
SMG7-208ENST00000493609 RNASE3P12724 160 aaKnown RBP2.57□□□□□ -2
SMG7-208ENST00000493609 ASIPP42127 132 aa2.57□□□□□ -2
SMG7-208ENST00000493609 TCL1AP56279 114 aa2.57□□□□□ -2
SMG7-208ENST00000493609 LGALS9BQ3B8N2 356 aa2.57□□□□□ -2
SMG7-208ENST00000493609 OR10J3Q5JRS4 329 aa2.57□□□□□ -2
SMG7-208ENST00000493609 GDF5OSQ5U4N7 250 aa2.57□□□□□ -2
SMG7-208ENST00000493609 ZFP82Q8N141 532 aa2.57□□□□□ -2
SMG7-208ENST00000493609 C3orf56Q8N813 242 aa2.57□□□□□ -2
SMG7-208ENST00000493609 FER1L6-AS1Q8NA97 138 aa2.57□□□□□ -2
SMG7-208ENST00000493609 TMEM263Q8WUH6 116 aaKnown RBP2.57□□□□□ -2
SMG7-208ENST00000493609 AP1S3Q96PC3 154 aa2.57□□□□□ -2
SMG7-208ENST00000493609 NBEAL1Q6ZS30 2694 aa2.56□□□□□ -2
SMG7-208ENST00000493609 A0A0B4J2C4 111 aa2.56□□□□□ -2
SMG7-208ENST00000493609 LINC01546A6NGU7 62 aa2.56□□□□□ -2
SMG7-208ENST00000493609 PPP1R17O96001 155 aa2.56□□□□□ -2
SMG7-208ENST00000493609 ARMS2P0C7Q2 107 aa2.56□□□□□ -2
SMG7-208ENST00000493609 RAB5BP61020 215 aa2.56□□□□□ -2
SMG7-208ENST00000493609 Q0VG73 95 aa2.56□□□□□ -2
SMG7-208ENST00000493609 BORCS7Q96B45 105 aa2.56□□□□□ -2
SMG7-208ENST00000493609 MRAP2Q96G30 205 aa2.56□□□□□ -2
SMG7-208ENST00000493609 C11orf68Q9H3H3 251 aaKnown RBP2.56□□□□□ -2
SMG7-208ENST00000493609 U3KQK5 164 aa2.56□□□□□ -2
SMG7-208ENST00000493609 MUC4Q99102 2169 aa2.56□□□□□ -2
SMG7-208ENST00000493609 PKD1L1Q8TDX9 2849 aa2.55□□□□□ -2
SMG7-208ENST00000493609 TGIF2-C20orf24A0A0A6YYL0 155 aa2.55□□□□□ -2
SMG7-208ENST00000493609 TRBV6-5A0A0K0K1A5 114 aa2.55□□□□□ -2
SMG7-208ENST00000493609 A8MWP4 228 aa2.55□□□□□ -2
SMG7-208ENST00000493609 A8MWV9 139 aa2.55□□□□□ -2
SMG7-208ENST00000493609 C1orf196B1AJZ1 125 aa2.55□□□□□ -2
SMG7-208ENST00000493609 K7ERS5 55 aa2.55□□□□□ -2
SMG7-208ENST00000493609 M0R2Z0 102 aa2.55□□□□□ -2
SMG7-208ENST00000493609 HIST1H2BKO60814 126 aa2.55□□□□□ -2
SMG7-208ENST00000493609 IGHV3-53P01767 116 aa2.55□□□□□ -2
SMG7-208ENST00000493609 ORM1P02763 201 aa2.55□□□□□ -2
SMG7-208ENST00000493609 HIST1H2BJP06899 126 aa2.55□□□□□ -2
SMG7-208ENST00000493609 CD7P09564 240 aa2.55□□□□□ -2
SMG7-208ENST00000493609 MIFP14174 115 aa2.55□□□□□ -2
SMG7-208ENST00000493609 HIST1H2BOP23527 126 aa2.55□□□□□ -2
SMG7-208ENST00000493609 HIST1H2BBP33778 126 aa2.55□□□□□ -2
SMG7-208ENST00000493609 HIST1H2BDP58876 126 aa2.55□□□□□ -2
SMG7-208ENST00000493609 HIST1H2BCP62807 126 aa2.55□□□□□ -2
SMG7-208ENST00000493609 HIST2H2BEQ16778 126 aa2.55□□□□□ -2
SMG7-208ENST00000493609 SPINK13Q1W4C9 94 aa2.55□□□□□ -2
SMG7-208ENST00000493609 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.55□□□□□ -2
SMG7-208ENST00000493609 LYZL1Q6UWQ5 148 aa2.55□□□□□ -2
SMG7-208ENST00000493609 FAM19A1Q7Z5A9 133 aa2.55□□□□□ -2
SMG7-208ENST00000493609 C1orf158Q8N1D5 194 aa2.55□□□□□ -2
SMG7-208ENST00000493609 HIST1H2BHQ93079 126 aa2.55□□□□□ -2
SMG7-208ENST00000493609 HIST1H2BNQ99877 126 aa2.55□□□□□ -2
SMG7-208ENST00000493609 HIST1H2BMQ99879 126 aa2.55□□□□□ -2
SMG7-208ENST00000493609 DPH3P1Q9H4G8 78 aa2.55□□□□□ -2
SMG7-208ENST00000493609 IGKV3-7A0A075B6H7 116 aa2.54□□□□□ -2
SMG7-208ENST00000493609 IGLV10-54A0A075B6I4 117 aa2.54□□□□□ -2
SMG7-208ENST00000493609 TRAV12-3A0A0B4J271 114 aa2.54□□□□□ -2
SMG7-208ENST00000493609 TRBV10-1A0A0K0K1A3 114 aa2.54□□□□□ -2
SMG7-208ENST00000493609 KNCNA6PVL3 124 aa2.54□□□□□ -2
SMG7-208ENST00000493609 H3BVH4 76 aa2.54□□□□□ -2
SMG7-208ENST00000493609 M0R2P5 195 aa2.54□□□□□ -2
SMG7-208ENST00000493609 SPINK4O60575 86 aa2.54□□□□□ -2
SMG7-208ENST00000493609 SMIM15Q7Z3B0 74 aa2.54□□□□□ -2
SMG7-208ENST00000493609 OR10AG1Q8NH19 301 aa2.54□□□□□ -2
SMG7-208ENST00000493609 CHCHD1Q96BP2 118 aaKnown RBP2.54□□□□□ -2
SMG7-208ENST00000493609 C20orf78Q9BR46 151 aa2.54□□□□□ -2
SMG7-208ENST00000493609 NAGKQ9UJ70 344 aa2.54□□□□□ -2
SMG7-208ENST00000493609 PHLDA3Q9Y5J5 127 aa2.54□□□□□ -2
SMG7-208ENST00000493609 URGCP-MRPS24S4R325 110 aa2.54□□□□□ -2
SMG7-208ENST00000493609 MGAM2Q2M2H8 2515 aa2.54□□□□□ -2
SMG7-208ENST00000493609 DNAH9Q9NYC9 4486 aa2.54□□□□□ -2
SMG7-208ENST00000493609 PRKDCP78527 4128 aaKnown RBP2.53□□□□□ -2
SMG7-208ENST00000493609 TRAV4A0A0B4J268 109 aa2.53□□□□□ -2
SMG7-208ENST00000493609 TRBV27A0A0K0K1C4 114 aa2.53□□□□□ -2
SMG7-208ENST00000493609 TRGC2P03986 189 aa2.53□□□□□ -2
SMG7-208ENST00000493609 LINC00694P0DN24 101 aa2.53□□□□□ -2
SMG7-208ENST00000493609 S100A4P26447 101 aaKnown RBP2.53□□□□□ -2
SMG7-208ENST00000493609 RNASE4P34096 147 aaKnown RBP2.53□□□□□ -2
SMG7-208ENST00000493609 AKR1D1P51857 326 aa2.53□□□□□ -2
SMG7-208ENST00000493609 DEFB1P60022 68 aa2.53□□□□□ -2
SMG7-208ENST00000493609 RRN3P1Q2M238 152 aa2.53□□□□□ -2
SMG7-208ENST00000493609 SPANXN1Q5VSR9 72 aa2.53□□□□□ -2
SMG7-208ENST00000493609 MRPL54Q6P161 138 aaKnown RBP2.53□□□□□ -2
SMG7-208ENST00000493609 Q8NAQ8 132 aa2.53□□□□□ -2
SMG7-208ENST00000493609 C18orf32Q8TCD1 76 aa2.53□□□□□ -2
SMG7-208ENST00000493609 DNAJC30Q96LL9 226 aa2.53□□□□□ -2
SMG7-208ENST00000493609 ANAPC13Q9BS18 74 aa2.53□□□□□ -2
SMG7-208ENST00000493609 NXT2Q9NPJ8 142 aaKnown RBP2.53□□□□□ -2
SMG7-208ENST00000493609 HUWE1Q7Z6Z7 4374 aaKnown RBP2.53□□□□□ -2
SMG7-208ENST00000493609 DNAH7Q8WXX0 4024 aa2.53□□□□□ -2
SMG7-208ENST00000493609 DYNC2H1Q8NCM8 4307 aaKnown RBP2.53□□□□□ -2
SMG7-208ENST00000493609 TRAV12-2A0A075B6T6 113 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms