RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 IFITM10A6NMD0 228 aa9.83□□□□□ -0.84
CDC42SE1-205ENST00000491825 FOXI1Q12951 378 aa9.83□□□□□ -0.84
CDC42SE1-205ENST00000491825 CD164L2Q6UWJ8 174 aa9.83□□□□□ -0.84
CDC42SE1-205ENST00000491825 TEX43Q6ZNM6 134 aa9.83□□□□□ -0.84
CDC42SE1-205ENST00000491825 C2orf88Q9BSF0 95 aa9.83□□□□□ -0.84
CDC42SE1-205ENST00000491825 FAM30AQ9NZY2 134 aa9.83□□□□□ -0.84
CDC42SE1-205ENST00000491825 XCL1P47992 114 aa9.82□□□□□ -0.84
CDC42SE1-205ENST00000491825 C14orf177Q52M58 125 aa9.82□□□□□ -0.84
CDC42SE1-205ENST00000491825 LINC00173Q6ZV60 143 aa9.82□□□□□ -0.84
CDC42SE1-205ENST00000491825 BAGE3Q86Y29 109 aa9.82□□□□□ -0.84
CDC42SE1-205ENST00000491825 SCGB3A1Q96QR1 104 aa9.82□□□□□ -0.84
CDC42SE1-205ENST00000491825 FLG2Q5D862 2391 aaPredicted RBP9.82□□□□□ -0.84
CDC42SE1-205ENST00000491825 USP17L23D6RBM5 183 aa9.81□□□□□ -0.84
CDC42SE1-205ENST00000491825 LECT2O14960 151 aa9.81□□□□□ -0.84
CDC42SE1-205ENST00000491825 VCX2Q9H322 139 aa9.81□□□□□ -0.84
CDC42SE1-205ENST00000491825 UBE2D1P51668 147 aa9.8□□□□□ -0.84
CDC42SE1-205ENST00000491825 PDZD11Q5EBL8 140 aa9.8□□□□□ -0.84
CDC42SE1-205ENST00000491825 FAM19A3Q7Z5A8 133 aa9.8□□□□□ -0.84
CDC42SE1-205ENST00000491825 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 FAM229AH3BQW9 127 aa9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 HIST1H2BKO60814 126 aa9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 HSBP1O75506 76 aa9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 HIST1H2BJP06899 126 aa9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 HIST1H2BOP23527 126 aa9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 HIST1H2BBP33778 126 aa9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 HIST1H2BDP58876 126 aa9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 LINC00310P59036 64 aa9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 HIST1H2BCP62807 126 aa9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 PMCHL1Q16048 86 aa9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 HIST2H2BEQ16778 126 aa9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 Q6ZSA8 131 aa9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 HIST1H2BHQ93079 126 aa9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 HIST1H2BNQ99877 126 aa9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 HIST1H2BMQ99879 126 aa9.79□□□□□ -0.84
CDC42SE1-205ENST00000491825 SERF1AO75920 110 aa9.78□□□□□ -0.84
CDC42SE1-205ENST00000491825 LINC00242Q5T6M2 205 aa9.78□□□□□ -0.84
CDC42SE1-205ENST00000491825 CFAP161Q6P656 301 aa9.78□□□□□ -0.84
CDC42SE1-205ENST00000491825 C15orf56Q8N910 161 aa9.78□□□□□ -0.84
CDC42SE1-205ENST00000491825 GVQW2A0A096LPI5 108 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE1-205ENST00000491825 IGHV3OR16-9A0A0B4J2B5 98 aa9.77□□□□□ -0.85
CDC42SE1-205ENST00000491825 COX7A2LO14548 114 aa9.77□□□□□ -0.85
CDC42SE1-205ENST00000491825 ATP5LO75964 103 aa9.77□□□□□ -0.85
CDC42SE1-205ENST00000491825 IGHV1-58A0A0C4DH39 117 aa9.76□□□□□ -0.85
CDC42SE1-205ENST00000491825 PRSS1P07477 247 aa9.76□□□□□ -0.85
CDC42SE1-205ENST00000491825 SEC11AP67812 179 aa9.76□□□□□ -0.85
CDC42SE1-205ENST00000491825 ZC2HC1BQ5TFG8 222 aa9.76□□□□□ -0.85
CDC42SE1-205ENST00000491825 PMVKQ15126 192 aa9.75□□□□□ -0.85
CDC42SE1-205ENST00000491825 CST9LQ9H4G1 147 aa9.75□□□□□ -0.85
CDC42SE1-205ENST00000491825 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE1-205ENST00000491825 A0A087WZ39 114 aa9.74□□□□□ -0.85
CDC42SE1-205ENST00000491825 MALP21145 153 aa9.74□□□□□ -0.85
CDC42SE1-205ENST00000491825 CNBPP62633 177 aaKnown RBP9.74□□□□□ -0.85
CDC42SE1-205ENST00000491825 hDV102S1A0JD36 115 aa9.73□□□□□ -0.85
CDC42SE1-205ENST00000491825 HERVK_113P63121 156 aa9.73□□□□□ -0.85
CDC42SE1-205ENST00000491825 COA6Q5JTJ3 125 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-205ENST00000491825 LINC01561Q8N1V8 128 aa9.73□□□□□ -0.85
CDC42SE1-205ENST00000491825 FAM19A2Q8N3H0 131 aa9.73□□□□□ -0.85
CDC42SE1-205ENST00000491825 IGLV5-45A0A087WSX0 123 aa9.72□□□□□ -0.85
CDC42SE1-205ENST00000491825 TINCRA0A1B0GVN0 87 aa9.72□□□□□ -0.85
CDC42SE1-205ENST00000491825 NUPR1O60356 82 aa9.72□□□□□ -0.85
CDC42SE1-205ENST00000491825 APOMO95445 188 aa9.72□□□□□ -0.85
CDC42SE1-205ENST00000491825 COX6A2Q02221 97 aa9.72□□□□□ -0.85
CDC42SE1-205ENST00000491825 C5orf38Q86SI9 138 aa9.72□□□□□ -0.85
CDC42SE1-205ENST00000491825 OR10D4PQ8NGN7 298 aa9.72□□□□□ -0.85
CDC42SE1-205ENST00000491825 LRP1Q07954 4544 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-205ENST00000491825 LINC00528Q8N1L1 170 aa9.71□□□□□ -0.86
CDC42SE1-205ENST00000491825 IFI27L1Q96BM0 104 aa9.71□□□□□ -0.86
CDC42SE1-205ENST00000491825 IGHV3-64A0A075B6Q5 118 aa9.7□□□□□ -0.86
CDC42SE1-205ENST00000491825 TRAV12-1A0A0B4J245 112 aa9.7□□□□□ -0.86
CDC42SE1-205ENST00000491825 A0A0J9YXV3 536 aa9.7□□□□□ -0.86
CDC42SE1-205ENST00000491825 LEPROTL1O95214 131 aa9.7□□□□□ -0.86
CDC42SE1-205ENST00000491825 LINC01620Q4KN68 170 aa9.7□□□□□ -0.86
CDC42SE1-205ENST00000491825 HIGD2BQ4VC39 106 aa9.7□□□□□ -0.86
CDC42SE1-205ENST00000491825 PACRGQ96M98 296 aaPredicted RBP9.7□□□□□ -0.86
CDC42SE1-205ENST00000491825 GEMIN7Q9H840 131 aaKnown RBP9.7□□□□□ -0.86
CDC42SE1-205ENST00000491825 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE1-205ENST00000491825 IGLC3P0DOY3 106 aa9.69□□□□□ -0.86
CDC42SE1-205ENST00000491825 SCXQ7RTU7 201 aa9.69□□□□□ -0.86
CDC42SE1-205ENST00000491825 FAT3Q8TDW7 4589 aa9.69□□□□□ -0.86
CDC42SE1-205ENST00000491825 HSPB8Q9UJY1 196 aa9.69□□□□□ -0.86
CDC42SE1-205ENST00000491825 IGLV4-69A0A075B6H9 119 aa9.68□□□□□ -0.86
CDC42SE1-205ENST00000491825 ZNF561-AS1K7EIQ3 104 aa9.68□□□□□ -0.86
CDC42SE1-205ENST00000491825 SLPIP03973 132 aa9.68□□□□□ -0.86
CDC42SE1-205ENST00000491825 PLA2G1BP04054 148 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-205ENST00000491825 C9orf163Q8N9P6 203 aa9.68□□□□□ -0.86
CDC42SE1-205ENST00000491825 CDKN2A-AS1Q9UH64 79 aa9.68□□□□□ -0.86
CDC42SE1-205ENST00000491825 KRTAP10-4P60372 401 aaPredicted RBP9.67□□□□□ -0.86
CDC42SE1-205ENST00000491825 SPAG11BQ08648 103 aa9.67□□□□□ -0.86
CDC42SE1-205ENST00000491825 LINC00469Q8N7U9 141 aa9.67□□□□□ -0.86
CDC42SE1-205ENST00000491825 ORAOV1Q8WV07 137 aa9.67□□□□□ -0.86
CDC42SE1-205ENST00000491825 C2orf48Q96LS8 159 aa9.67□□□□□ -0.86
CDC42SE1-205ENST00000491825 CHAC1Q9BUX1 264 aa9.67□□□□□ -0.86
CDC42SE1-205ENST00000491825 HMCN2Q8NDA2 5059 aa9.66□□□□□ -0.86
CDC42SE1-205ENST00000491825 KRTAP29-1A8MX34 341 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-205ENST00000491825 F8WDY8 70 aa9.66□□□□□ -0.86
CDC42SE1-205ENST00000491825 NDUFA6P56556 154 aa9.66□□□□□ -0.86
CDC42SE1-205ENST00000491825 J3QL48 77 aa9.65□□□□□ -0.86
CDC42SE1-205ENST00000491825 CHTOPQ9Y3Y2 248 aaKnown RBP9.65□□□□□ -0.86
CDC42SE1-205ENST00000491825 SMIM1B2RUZ4 78 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms