RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 ERASQ7Z444 233 aa7.74□□□□□ -1.17
APTX-227ENST00000485479 TIMM17AQ99595 171 aa7.74□□□□□ -1.17
APTX-227ENST00000485479 UBE2D1P51668 147 aa7.73□□□□□ -1.17
APTX-227ENST00000485479 PGPEP1Q9NXJ5 209 aa7.73□□□□□ -1.17
APTX-227ENST00000485479 COX7A2LO14548 114 aa7.73□□□□□ -1.17
APTX-227ENST00000485479 HIST1H2BKO60814 126 aa7.73□□□□□ -1.17
APTX-227ENST00000485479 HIST1H2BJP06899 126 aa7.73□□□□□ -1.17
APTX-227ENST00000485479 MALP21145 153 aa7.73□□□□□ -1.17
APTX-227ENST00000485479 HIST1H2BOP23527 126 aa7.73□□□□□ -1.17
APTX-227ENST00000485479 HIST1H2BBP33778 126 aa7.73□□□□□ -1.17
APTX-227ENST00000485479 NDUFA6P56556 154 aa7.73□□□□□ -1.17
APTX-227ENST00000485479 HIST1H2BDP58876 126 aa7.73□□□□□ -1.17
APTX-227ENST00000485479 HIST1H2BCP62807 126 aa7.73□□□□□ -1.17
APTX-227ENST00000485479 HIST2H2BEQ16778 126 aa7.73□□□□□ -1.17
APTX-227ENST00000485479 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.73□□□□□ -1.17
APTX-227ENST00000485479 HIST1H2BHQ93079 126 aa7.73□□□□□ -1.17
APTX-227ENST00000485479 HIST1H2BNQ99877 126 aa7.73□□□□□ -1.17
APTX-227ENST00000485479 HIST1H2BMQ99879 126 aa7.73□□□□□ -1.17
APTX-227ENST00000485479 C2orf88Q9BSF0 95 aa7.73□□□□□ -1.17
APTX-227ENST00000485479 APOBP04114 4563 aaKnown RBP7.72□□□□□ -1.17
APTX-227ENST00000485479 A0A0J9YXV3 536 aa7.72□□□□□ -1.17
APTX-227ENST00000485479 HSBP1O75506 76 aa7.72□□□□□ -1.17
APTX-227ENST00000485479 RAB5BP61020 215 aa7.72□□□□□ -1.17
APTX-227ENST00000485479 IGHV3OR16-9A0A0B4J2B5 98 aa7.71□□□□□ -1.17
APTX-227ENST00000485479 GCSHP23434 173 aa7.71□□□□□ -1.17
APTX-227ENST00000485479 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.71□□□□□ -1.18
APTX-227ENST00000485479 LCE2BO14633 110 aa7.71□□□□□ -1.18
APTX-227ENST00000485479 G0S2P27469 103 aa7.71□□□□□ -1.18
APTX-227ENST00000485479 CHCHD1Q96BP2 118 aaKnown RBP7.71□□□□□ -1.18
APTX-227ENST00000485479 FAM30AQ9NZY2 134 aa7.71□□□□□ -1.18
APTX-227ENST00000485479 RYR1P21817 5038 aa7.71□□□□□ -1.18
APTX-227ENST00000485479 H0Y8G0 127 aa7.7□□□□□ -1.18
APTX-227ENST00000485479 PDZD11Q5EBL8 140 aa7.7□□□□□ -1.18
APTX-227ENST00000485479 CDPF1Q6NVV7 123 aa7.7□□□□□ -1.18
APTX-227ENST00000485479 CST9LQ9H4G1 147 aa7.7□□□□□ -1.18
APTX-227ENST00000485479 C14orf177Q52M58 125 aa7.7□□□□□ -1.18
APTX-227ENST00000485479 IGLV4-69A0A075B6H9 119 aa7.69□□□□□ -1.18
APTX-227ENST00000485479 FABP4P15090 132 aa7.69□□□□□ -1.18
APTX-227ENST00000485479 CDKN2A-AS1Q9UH64 79 aa7.69□□□□□ -1.18
APTX-227ENST00000485479 GVQW2A0A096LPI5 108 aaPredicted RBP7.68□□□□□ -1.18
APTX-227ENST00000485479 IGHV1-58A0A0C4DH39 117 aa7.68□□□□□ -1.18
APTX-227ENST00000485479 PMVKQ15126 192 aa7.68□□□□□ -1.18
APTX-227ENST00000485479 PAPPA-AS1Q5QFB9 102 aa7.68□□□□□ -1.18
APTX-227ENST00000485479 CFAP161Q6P656 301 aa7.68□□□□□ -1.18
APTX-227ENST00000485479 ORAOV1Q8WV07 137 aa7.68□□□□□ -1.18
APTX-227ENST00000485479 HSPG2P98160 4391 aa7.68□□□□□ -1.18
APTX-227ENST00000485479 ZNF561-AS1K7EIQ3 104 aa7.67□□□□□ -1.18
APTX-227ENST00000485479 NPSP0C0P6 89 aa7.67□□□□□ -1.18
APTX-227ENST00000485479 SPAG11BQ08648 103 aa7.67□□□□□ -1.18
APTX-227ENST00000485479 LINC00469Q8N7U9 141 aa7.67□□□□□ -1.18
APTX-227ENST00000485479 GEMIN7Q9H840 131 aaKnown RBP7.67□□□□□ -1.18
APTX-227ENST00000485479 A0A087WZ39 114 aa7.66□□□□□ -1.18
APTX-227ENST00000485479 PANO1I0J062 215 aa7.66□□□□□ -1.18
APTX-227ENST00000485479 IFI27L1Q96BM0 104 aa7.66□□□□□ -1.18
APTX-227ENST00000485479 KRTAP17-1Q9BYP8 105 aa7.66□□□□□ -1.18
APTX-227ENST00000485479 IGHV3-64A0A075B6Q5 118 aa7.66□□□□□ -1.18
APTX-227ENST00000485479 ATP5LO75964 103 aa7.66□□□□□ -1.18
APTX-227ENST00000485479 CHTF8P0CG12 524 aa7.66□□□□□ -1.18
APTX-227ENST00000485479 CHAC1Q9BUX1 264 aa7.66□□□□□ -1.18
APTX-227ENST00000485479 TOMM7Q9P0U1 55 aa7.66□□□□□ -1.18
APTX-227ENST00000485479 LEPROTL1O95214 131 aa7.65□□□□□ -1.18
APTX-227ENST00000485479 CNBPP62633 177 aaKnown RBP7.65□□□□□ -1.18
APTX-227ENST00000485479 C2orf82Q6UX34 121 aa7.65□□□□□ -1.18
APTX-227ENST00000485479 Q6ZRU5 148 aa7.65□□□□□ -1.18
APTX-227ENST00000485479 C9orf163Q8N9P6 203 aa7.65□□□□□ -1.18
APTX-227ENST00000485479 LINC01549A6NIU2 74 aa7.64□□□□□ -1.19
APTX-227ENST00000485479 SPINK8P0C7L1 97 aa7.64□□□□□ -1.19
APTX-227ENST00000485479 XGP55808 180 aa7.64□□□□□ -1.19
APTX-227ENST00000485479 HERVK_113P63121 156 aa7.64□□□□□ -1.19
APTX-227ENST00000485479 C10orf25Q5T742 122 aa7.64□□□□□ -1.19
APTX-227ENST00000485479 TINCRA0A1B0GVN0 87 aa7.64□□□□□ -1.19
APTX-227ENST00000485479 APOMO95445 188 aa7.64□□□□□ -1.19
APTX-227ENST00000485479 FAM19A3Q7Z5A8 133 aa7.64□□□□□ -1.19
APTX-227ENST00000485479 CARD19Q96LW7 228 aa7.64□□□□□ -1.19
APTX-227ENST00000485479 CAMK2N2Q96S95 79 aa7.64□□□□□ -1.19
APTX-227ENST00000485479 PMCHL2Q9BQD1 86 aa7.64□□□□□ -1.19
APTX-227ENST00000485479 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.64□□□□□ -1.19
APTX-227ENST00000485479 HERC2O95714 4834 aa7.63□□□□□ -1.19
APTX-227ENST00000485479 DNAH8Q96JB1 4490 aa7.63□□□□□ -1.19
APTX-227ENST00000485479 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.63□□□□□ -1.19
APTX-227ENST00000485479 C11orf86A6NJI1 115 aa7.63□□□□□ -1.19
APTX-227ENST00000485479 PACRGQ96M98 296 aaPredicted RBP7.63□□□□□ -1.19
APTX-227ENST00000485479 IGKV2-24A0A0C4DH68 120 aa7.62□□□□□ -1.19
APTX-227ENST00000485479 TMEM238LA0A1B0GVL6 79 aa7.62□□□□□ -1.19
APTX-227ENST00000485479 SMIM1B2RUZ4 78 aa7.62□□□□□ -1.19
APTX-227ENST00000485479 SMR3BP02814 79 aaPredicted RBP7.62□□□□□ -1.19
APTX-227ENST00000485479 SYCNQ0VAF6 134 aa7.62□□□□□ -1.19
APTX-227ENST00000485479 KIAA0087Q14695 138 aa7.62□□□□□ -1.19
APTX-227ENST00000485479 UNQ6190/PRO20217Q6UXQ8 127 aa7.62□□□□□ -1.19
APTX-227ENST00000485479 SDIM1Q6ZPB5 146 aa7.62□□□□□ -1.19
APTX-227ENST00000485479 MRPL35Q9NZE8 188 aaKnown RBP7.62□□□□□ -1.19
APTX-227ENST00000485479 CHTOPQ9Y3Y2 248 aaKnown RBP7.62□□□□□ -1.19
APTX-227ENST00000485479 IGLC3P0DOY3 106 aa7.62□□□□□ -1.19
APTX-227ENST00000485479 ZNF22P17026 224 aaPredicted RBP7.62□□□□□ -1.19
APTX-227ENST00000485479 SEC11AP67812 179 aa7.62□□□□□ -1.19
APTX-227ENST00000485479 OR10D4PQ8NGN7 298 aa7.62□□□□□ -1.19
APTX-227ENST00000485479 C9orf116Q5BN46 136 aaPredicted RBP7.61□□□□□ -1.19
APTX-227ENST00000485479 TMEM170BQ5T4T1 132 aa7.61□□□□□ -1.19
APTX-227ENST00000485479 FAT1Q14517 4588 aa7.61□□□□□ -1.19
APTX-227ENST00000485479 IGLV5-45A0A087WSX0 123 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms