RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 LYRM9A8MSI8 78 aa6.18□□□□□ -1.42
CDC42SE1-204ENST00000483763 GYPEP15421 78 aa6.18□□□□□ -1.42
CDC42SE1-204ENST00000483763 SAMD5Q5TGI4 173 aa6.18□□□□□ -1.42
CDC42SE1-204ENST00000483763 HIGD1BQ9P298 99 aa6.18□□□□□ -1.42
CDC42SE1-204ENST00000483763 A0A096LPF7 62 aa6.17□□□□□ -1.42
CDC42SE1-204ENST00000483763 TRAV8-3A0A0A6YYJ7 113 aa6.17□□□□□ -1.42
CDC42SE1-204ENST00000483763 ZNF815PA8K554 130 aa6.17□□□□□ -1.42
CDC42SE1-204ENST00000483763 COX6A2Q02221 97 aa6.17□□□□□ -1.42
CDC42SE1-204ENST00000483763 VSIG2Q96IQ7 327 aa6.17□□□□□ -1.42
CDC42SE1-204ENST00000483763 A0A0J9YY99 117 aa6.17□□□□□ -1.42
CDC42SE1-204ENST00000483763 MIFP14174 115 aa6.17□□□□□ -1.42
CDC42SE1-204ENST00000483763 UBE2D1P51668 147 aa6.17□□□□□ -1.42
CDC42SE1-204ENST00000483763 FXYD2P54710 66 aa6.17□□□□□ -1.42
CDC42SE1-204ENST00000483763 NAA38Q9BRA0 125 aaKnown RBP6.17□□□□□ -1.42
CDC42SE1-204ENST00000483763 TIMM21Q9BVV7 248 aa6.17□□□□□ -1.42
CDC42SE1-204ENST00000483763 CDC42SE2Q9NRR3 84 aa6.17□□□□□ -1.42
CDC42SE1-204ENST00000483763 TRBV6-8A0A0A6YYG3 113 aa6.16□□□□□ -1.42
CDC42SE1-204ENST00000483763 FABP2P12104 132 aa6.16□□□□□ -1.42
CDC42SE1-204ENST00000483763 TMEM243Q9BU79 118 aa6.16□□□□□ -1.42
CDC42SE1-204ENST00000483763 PRO0255Q9UI72 69 aa6.16□□□□□ -1.42
CDC42SE1-204ENST00000483763 J3QQQ9 107 aa6.16□□□□□ -1.42
CDC42SE1-204ENST00000483763 GCSHP23434 173 aa6.16□□□□□ -1.42
CDC42SE1-204ENST00000483763 CDKN2A-AS1Q9UH64 79 aa6.16□□□□□ -1.42
CDC42SE1-204ENST00000483763 IGLV4-60A0A075B6I1 120 aa6.15□□□□□ -1.42
CDC42SE1-204ENST00000483763 TRAV13-1A0A0B4J241 112 aa6.15□□□□□ -1.42
CDC42SE1-204ENST00000483763 TINCRA0A1B0GVN0 87 aa6.15□□□□□ -1.42
CDC42SE1-204ENST00000483763 SPINK8P0C7L1 97 aa6.15□□□□□ -1.42
CDC42SE1-204ENST00000483763 HERVK_113P61574 105 aa6.15□□□□□ -1.42
CDC42SE1-204ENST00000483763 DAD1P61803 113 aa6.15□□□□□ -1.42
CDC42SE1-204ENST00000483763 LINC00242Q5T6M2 205 aa6.15□□□□□ -1.42
CDC42SE1-204ENST00000483763 SPANXB1Q9NS25 103 aaPredicted RBP6.15□□□□□ -1.42
CDC42SE1-204ENST00000483763 IGHV3-30-3P0DP02 117 aa6.15□□□□□ -1.43
CDC42SE1-204ENST00000483763 PAX4O43316 350 aa6.14□□□□□ -1.43
CDC42SE1-204ENST00000483763 SPART-AS1P0CW21 52 aa6.14□□□□□ -1.43
CDC42SE1-204ENST00000483763 CEND1Q8N111 149 aa6.14□□□□□ -1.43
CDC42SE1-204ENST00000483763 ATP6V0E2Q8NHE4 81 aa6.14□□□□□ -1.43
CDC42SE1-204ENST00000483763 TM2D2Q9BX73 214 aa6.14□□□□□ -1.43
CDC42SE1-204ENST00000483763 TMEM126AQ9H061 195 aa6.14□□□□□ -1.43
CDC42SE1-204ENST00000483763 K7ERJ3 54 aa6.14□□□□□ -1.43
CDC42SE1-204ENST00000483763 UBE2L6O14933 153 aa6.14□□□□□ -1.43
CDC42SE1-204ENST00000483763 LEPROTO15243 131 aa6.14□□□□□ -1.43
CDC42SE1-204ENST00000483763 SCGB1D4Q6XE38 83 aa6.14□□□□□ -1.43
CDC42SE1-204ENST00000483763 RAB37Q96AX2 223 aa6.14□□□□□ -1.43
CDC42SE1-204ENST00000483763 CHCHD5Q9BSY4 110 aa6.14□□□□□ -1.43
CDC42SE1-204ENST00000483763 IGLV5-45A0A087WSX0 123 aa6.13□□□□□ -1.43
CDC42SE1-204ENST00000483763 SMIM13P0DJ93 91 aa6.13□□□□□ -1.43
CDC42SE1-204ENST00000483763 HTN3P15516 51 aa6.13□□□□□ -1.43
CDC42SE1-204ENST00000483763 DEFB121Q5J5C9 76 aa6.13□□□□□ -1.43
CDC42SE1-204ENST00000483763 C10orf126Q8N4M7 172 aa6.13□□□□□ -1.43
CDC42SE1-204ENST00000483763 HIST1H4GQ99525 98 aa6.13□□□□□ -1.43
CDC42SE1-204ENST00000483763 IGHV1-58A0A0C4DH39 117 aa6.13□□□□□ -1.43
CDC42SE1-204ENST00000483763 ATP5G1P05496 136 aa6.13□□□□□ -1.43
CDC42SE1-204ENST00000483763 C12orf74Q32Q52 190 aa6.13□□□□□ -1.43
CDC42SE1-204ENST00000483763 Q8N3U1 123 aa6.13□□□□□ -1.43
CDC42SE1-204ENST00000483763 F8W1H4 67 aa6.12□□□□□ -1.43
CDC42SE1-204ENST00000483763 LGALS3P17931 250 aaKnown RBP6.12□□□□□ -1.43
CDC42SE1-204ENST00000483763 OR13C6PQ8NH95 151 aa6.12□□□□□ -1.43
CDC42SE1-204ENST00000483763 IGKV3OR2-268A0A0C4DH90 116 aa6.11□□□□□ -1.43
CDC42SE1-204ENST00000483763 H7C423 109 aa6.11□□□□□ -1.43
CDC42SE1-204ENST00000483763 FAM19A3Q7Z5A8 133 aa6.11□□□□□ -1.43
CDC42SE1-204ENST00000483763 TMEM101Q96IK0 257 aa6.11□□□□□ -1.43
CDC42SE1-204ENST00000483763 NHP2Q9NX24 153 aaKnown RBP6.11□□□□□ -1.43
CDC42SE1-204ENST00000483763 CCDC179H3BU77 68 aa6.1□□□□□ -1.43
CDC42SE1-204ENST00000483763 K7EIL1 84 aa6.1□□□□□ -1.43
CDC42SE1-204ENST00000483763 NHLRC4P0CG21 123 aaPredicted RBP6.1□□□□□ -1.43
CDC42SE1-204ENST00000483763 WFDC2Q14508 124 aa6.1□□□□□ -1.43
CDC42SE1-204ENST00000483763 TAL2Q16559 108 aa6.1□□□□□ -1.43
CDC42SE1-204ENST00000483763 PRO0461Q9UI25 63 aa6.1□□□□□ -1.43
CDC42SE1-204ENST00000483763 DNAH9Q9NYC9 4486 aa6.1□□□□□ -1.43
CDC42SE1-204ENST00000483763 TMEM262E9PQX1 116 aa6.1□□□□□ -1.43
CDC42SE1-204ENST00000483763 HERVK_113P63121 156 aa6.1□□□□□ -1.43
CDC42SE1-204ENST00000483763 SRSF9Q13242 221 aaKnown RBP eCLIP6.1□□□□□ -1.43
CDC42SE1-204ENST00000483763 FAM19A5Q7Z5A7 132 aaPredicted RBP6.1□□□□□ -1.43
CDC42SE1-204ENST00000483763 A0A0J9YXY3 114 aa6.09□□□□□ -1.43
CDC42SE1-204ENST00000483763 SMIM1B2RUZ4 78 aa6.09□□□□□ -1.43
CDC42SE1-204ENST00000483763 V9GYY9 64 aa6.09□□□□□ -1.43
CDC42SE1-204ENST00000483763 IGLV5-39A0A0G2JS06 123 aa6.09□□□□□ -1.43
CDC42SE1-204ENST00000483763 A0A0J9YWU9 116 aa6.09□□□□□ -1.43
CDC42SE1-204ENST00000483763 J3QL48 77 aa6.09□□□□□ -1.43
CDC42SE1-204ENST00000483763 IGHV3-30P01768 117 aa6.09□□□□□ -1.43
CDC42SE1-204ENST00000483763 IGHV3-30-5P0DP03 117 aa6.09□□□□□ -1.43
CDC42SE1-204ENST00000483763 ADAMTSL4-AS1Q5T5F5 129 aa6.09□□□□□ -1.43
CDC42SE1-204ENST00000483763 ZFAND6Q6FIF0 208 aa6.09□□□□□ -1.43
CDC42SE1-204ENST00000483763 Q6ZTC4 211 aa6.09□□□□□ -1.43
CDC42SE1-204ENST00000483763 LITAFQ99732 161 aa6.09□□□□□ -1.43
CDC42SE1-204ENST00000483763 NDUFA12Q9UI09 145 aa6.09□□□□□ -1.43
CDC42SE1-204ENST00000483763 HUWE1Q7Z6Z7 4374 aaKnown RBP6.09□□□□□ -1.44
CDC42SE1-204ENST00000483763 IGLL5B9A064 214 aa6.08□□□□□ -1.44
CDC42SE1-204ENST00000483763 CLPSL2Q6UWE3 100 aa6.08□□□□□ -1.44
CDC42SE1-204ENST00000483763 A0A1B0GUV1 79 aa6.08□□□□□ -1.44
CDC42SE1-204ENST00000483763 GHRHP01286 108 aa6.08□□□□□ -1.44
CDC42SE1-204ENST00000483763 IGHV3OR16-9A0A0B4J2B5 98 aa6.07□□□□□ -1.44
CDC42SE1-204ENST00000483763 MT-ATP8P03928 68 aa6.07□□□□□ -1.44
CDC42SE1-204ENST00000483763 KPRPQ5T749 579 aaPredicted RBP6.07□□□□□ -1.44
CDC42SE1-204ENST00000483763 LINC00959A0A1B0GUT2 108 aa6.07□□□□□ -1.44
CDC42SE1-204ENST00000483763 A0A1B0GWB2 263 aa6.07□□□□□ -1.44
CDC42SE1-204ENST00000483763 EIF4EBP3O60516 100 aaPredicted RBP6.07□□□□□ -1.44
CDC42SE1-204ENST00000483763 NANOS2P60321 138 aaKnown RBP6.07□□□□□ -1.44
CDC42SE1-204ENST00000483763 ETDBQ3ZM63 59 aa6.07□□□□□ -1.44
CDC42SE1-204ENST00000483763 SH2D6Q7Z4S9 175 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms