RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 APLNQ9ULZ1 77 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 DOCK11Q5JSL3 2073 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 TRBV10-2A0A0K0K1G8 114 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 OR2T8A6NH00 312 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 M0R233 179 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 FUSP35637 526 aaKnown RBP eCLIP1.85□□□□□ -2.11
SMC6-208ENST00000481708 S100A10P60903 97 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 AKR1C1Q04828 323 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 KHDC3LQ587J8 217 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 KRTAP11-1Q8IUC1 163 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 MPC1Q9Y5U8 109 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 IGKV1D-17A0A075B6S4 117 aa1.84□□□□□ -2.11
SMC6-208ENST00000481708 H7C2G1 150 aa1.84□□□□□ -2.11
SMC6-208ENST00000481708 KRTAP10-6P60371 365 aaPredicted RBP1.84□□□□□ -2.11
SMC6-208ENST00000481708 LCE3CQ5T5A8 94 aa1.84□□□□□ -2.11
SMC6-208ENST00000481708 ATOH7Q8N100 152 aa1.84□□□□□ -2.11
SMC6-208ENST00000481708 LINC00269Q8N2A0 174 aa1.84□□□□□ -2.11
SMC6-208ENST00000481708 OR10AC1Q8NH08 325 aa1.84□□□□□ -2.11
SMC6-208ENST00000481708 DSCR8Q96T75 97 aa1.84□□□□□ -2.11
SMC6-208ENST00000481708 PDCD10Q9BUL8 212 aa1.84□□□□□ -2.11
SMC6-208ENST00000481708 NOP16Q9Y3C1 178 aaKnown RBP1.84□□□□□ -2.11
SMC6-208ENST00000481708 SSPOA2VEC9 5147 aa1.84□□□□□ -2.11
SMC6-208ENST00000481708 SRRM2Q9UQ35 2752 aaKnown RBP1.84□□□□□ -2.11
SMC6-208ENST00000481708 RTL8CO15255 209 aa1.84□□□□□ -2.11
SMC6-208ENST00000481708 HIST1H1BP16401 226 aaKnown RBP1.84□□□□□ -2.11
SMC6-208ENST00000481708 C12orf73Q69YU5 71 aa1.84□□□□□ -2.11
SMC6-208ENST00000481708 ACBD7Q8N6N7 88 aa1.84□□□□□ -2.11
SMC6-208ENST00000481708 OR5D16Q8NGK9 328 aa1.84□□□□□ -2.11
SMC6-208ENST00000481708 C7orf66A4D0T2 115 aa1.84□□□□□ -2.12
SMC6-208ENST00000481708 PYYP10082 97 aa1.84□□□□□ -2.12
SMC6-208ENST00000481708 PRB4P10163 310 aaPredicted RBP1.84□□□□□ -2.12
SMC6-208ENST00000481708 PIPP12273 146 aaPredicted RBP1.84□□□□□ -2.12
SMC6-208ENST00000481708 HRES1P13985 223 aa1.84□□□□□ -2.12
SMC6-208ENST00000481708 GNG4P50150 75 aa1.84□□□□□ -2.12
SMC6-208ENST00000481708 SMIM11AP58511 58 aa1.84□□□□□ -2.12
SMC6-208ENST00000481708 SNRPGP62308 76 aaKnown RBP1.84□□□□□ -2.12
SMC6-208ENST00000481708 FAM216BQ8N7L0 139 aa1.84□□□□□ -2.12
SMC6-208ENST00000481708 OTOSQ8NHW6 89 aa1.84□□□□□ -2.12
SMC6-208ENST00000481708 GINS4Q9BRT9 223 aa1.84□□□□□ -2.12
SMC6-208ENST00000481708 TRGV10A0A0A0MS01 117 aa1.83□□□□□ -2.12
SMC6-208ENST00000481708 LRCOL1A6NCL2 159 aa1.83□□□□□ -2.12
SMC6-208ENST00000481708 VMO1Q7Z5L0 202 aa1.83□□□□□ -2.12
SMC6-208ENST00000481708 OR4B1Q8NGF8 309 aa1.83□□□□□ -2.12
SMC6-208ENST00000481708 MUCL1Q96DR8 90 aa1.83□□□□□ -2.12
SMC6-208ENST00000481708 DYNLRB1Q9NP97 96 aa1.83□□□□□ -2.12
SMC6-208ENST00000481708 TAS2R8Q9NYW2 309 aa1.83□□□□□ -2.12
SMC6-208ENST00000481708 CDC42EP2O14613 210 aa1.83□□□□□ -2.12
SMC6-208ENST00000481708 METTL1Q9UBP6 276 aaKnown RBP1.83□□□□□ -2.12
SMC6-208ENST00000481708 TMEM235A6NFC5 223 aa1.83□□□□□ -2.12
SMC6-208ENST00000481708 MT1HL1P0DM35 61 aa1.83□□□□□ -2.12
SMC6-208ENST00000481708 ZNF833PQ6ZTB9 187 aa1.83□□□□□ -2.12
SMC6-208ENST00000481708 Q9H521 79 aa1.83□□□□□ -2.12
SMC6-208ENST00000481708 TRBV20-1A0A075B6N2 111 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 A0A0J9YX75 114 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 IBA57-AS1B1ANH7 110 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 MRPL33O75394 65 aaKnown RBP1.82□□□□□ -2.12
SMC6-208ENST00000481708 ESRGQ1W209 222 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 LGALSLQ3ZCW2 172 aaPredicted RBP1.82□□□□□ -2.12
SMC6-208ENST00000481708 LINC00299Q6ZSB3 139 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 FLG2Q5D862 2391 aaPredicted RBP1.82□□□□□ -2.12
SMC6-208ENST00000481708 TRAV12-2A0A075B6T6 113 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 GRIFINA4D1Z8 144 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 KRTAP10-12P60413 245 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 MRPS10P82664 201 aaKnown RBP1.82□□□□□ -2.12
SMC6-208ENST00000481708 ZNF345Q14585 488 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 XAF1Q6GPH4 301 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 LINC00467Q9BRT7 94 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 TCL1BO95988 128 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 SPINK8P0C7L1 97 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 ZNF705BP0CI00 300 aaPredicted RBP1.82□□□□□ -2.12
SMC6-208ENST00000481708 ZNF90Q03938 601 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 Q6AWC8 147 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 OR5AS1Q8N127 324 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 LINC00312Q9Y6C7 94 aa1.82□□□□□ -2.12
SMC6-208ENST00000481708 A0A1B0GWA3 101 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 A8MU10 97 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 M0R2P5 195 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 GEMIN2O14893 280 aaKnown RBP1.81□□□□□ -2.12
SMC6-208ENST00000481708 TRACP01848 142 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 TMEM258P61165 79 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 PCBD1P61457 104 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 TPRXLQ17RH7 258 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 FOXI2Q6ZQN5 318 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 SBSPONQ8IVN8 264 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 SPACA4Q8TDM5 124 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 YPEL2Q96QA6 119 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 PRR34Q9NV39 138 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 TIMM9Q9Y5J7 89 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 IER3IP1Q9Y5U9 82 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 SMIM31A0A1B0GVY4 71 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 CRPP02741 224 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 CIRBPQ14011 172 aaKnown RBP1.81□□□□□ -2.12
SMC6-208ENST00000481708 TSKUQ8WUA8 353 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 CREBL2O60519 120 aaPredicted RBP1.81□□□□□ -2.12
SMC6-208ENST00000481708 KRTAP19-2Q3LHN2 52 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 KRTAP26-1Q6PEX3 210 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 HEPN1Q6WQI6 88 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 C8orf59Q8N0T1 100 aaPredicted RBP1.81□□□□□ -2.12
SMC6-208ENST00000481708 Q8TAT8 98 aa1.81□□□□□ -2.12
SMC6-208ENST00000481708 HYLS1Q96M11 299 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms