RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 SPANXN1Q5VSR9 72 aa3.53□□□□□ -1.84
USP33-208ENST00000477949 RASL11AQ6T310 242 aa3.53□□□□□ -1.84
USP33-208ENST00000477949 AP1S3Q96PC3 154 aa3.53□□□□□ -1.84
USP33-208ENST00000477949 NIT2Q9NQR4 276 aa3.53□□□□□ -1.84
USP33-208ENST00000477949 MRPL35Q9NZE8 188 aaKnown RBP3.53□□□□□ -1.84
USP33-208ENST00000477949 M0R2T5 61 aa3.52□□□□□ -1.85
USP33-208ENST00000477949 UBE2G1P62253 170 aa3.52□□□□□ -1.85
USP33-208ENST00000477949 KRTAP13-1Q8IUC0 172 aa3.52□□□□□ -1.85
USP33-208ENST00000477949 MARVELD1Q9BSK0 173 aa3.52□□□□□ -1.85
USP33-208ENST00000477949 SMDT1Q9H4I9 107 aa3.52□□□□□ -1.85
USP33-208ENST00000477949 MDN1Q9NU22 5596 aa3.51□□□□□ -1.85
USP33-208ENST00000477949 CTXND1A0A1B0GTU2 59 aa3.51□□□□□ -1.85
USP33-208ENST00000477949 KRTAP16-1A8MUX0 517 aa3.51□□□□□ -1.85
USP33-208ENST00000477949 G3V3Q6 166 aa3.51□□□□□ -1.85
USP33-208ENST00000477949 NUPR1O60356 82 aa3.51□□□□□ -1.85
USP33-208ENST00000477949 NCR2O95944 276 aa3.51□□□□□ -1.85
USP33-208ENST00000477949 ZNF25P17030 456 aaPredicted RBP3.51□□□□□ -1.85
USP33-208ENST00000477949 DSCR10P59022 87 aa3.51□□□□□ -1.85
USP33-208ENST00000477949 ZNF726P1Q15940 193 aa3.51□□□□□ -1.85
USP33-208ENST00000477949 C9orf129Q5T035 196 aaKnown RBP3.51□□□□□ -1.85
USP33-208ENST00000477949 AMMECR1LQ6DCA0 310 aa3.51□□□□□ -1.85
USP33-208ENST00000477949 RNASEKQ6P5S7 137 aaKnown RBP3.51□□□□□ -1.85
USP33-208ENST00000477949 STOML3Q8TAV4 291 aa3.51□□□□□ -1.85
USP33-208ENST00000477949 C6orf48Q9UBA6 75 aa3.51□□□□□ -1.85
USP33-208ENST00000477949 F2Z2F3 143 aa3.5□□□□□ -1.85
USP33-208ENST00000477949 INMT-MINDY4F8WBC2 141 aa3.5□□□□□ -1.85
USP33-208ENST00000477949 MGPP08493 103 aa3.5□□□□□ -1.85
USP33-208ENST00000477949 UBE2G2P60604 165 aa3.5□□□□□ -1.85
USP33-208ENST00000477949 SPAG11BQ08648 103 aa3.5□□□□□ -1.85
USP33-208ENST00000477949 NOTCH2NLQ7Z3S9 236 aa3.5□□□□□ -1.85
USP33-208ENST00000477949 OR2D3Q8NGH3 330 aa3.5□□□□□ -1.85
USP33-208ENST00000477949 IMMP2LQ96T52 175 aa3.5□□□□□ -1.85
USP33-208ENST00000477949 SMIM1B2RUZ4 78 aa3.49□□□□□ -1.85
USP33-208ENST00000477949 COX7A2LO14548 114 aa3.49□□□□□ -1.85
USP33-208ENST00000477949 IGLC6P0CF74 106 aa3.49□□□□□ -1.85
USP33-208ENST00000477949 CTRLP40313 264 aa3.49□□□□□ -1.85
USP33-208ENST00000477949 RPL28P46779 137 aaKnown RBP3.49□□□□□ -1.85
USP33-208ENST00000477949 SSTP61278 116 aa3.49□□□□□ -1.85
USP33-208ENST00000477949 C3orf22Q8N5N4 141 aa3.49□□□□□ -1.85
USP33-208ENST00000477949 CDC42SE2Q9NRR3 84 aa3.49□□□□□ -1.85
USP33-208ENST00000477949 F8WDY8 70 aa3.48□□□□□ -1.85
USP33-208ENST00000477949 BCE1O60756 84 aa3.48□□□□□ -1.85
USP33-208ENST00000477949 KRTAP2-3P0C7H8 128 aa3.48□□□□□ -1.85
USP33-208ENST00000477949 RPS20P60866 119 aaKnown RBP3.48□□□□□ -1.85
USP33-208ENST00000477949 GAGE2EQ4V326 116 aa3.48□□□□□ -1.85
USP33-208ENST00000477949 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
USP33-208ENST00000477949 UNQ6190/PRO20217Q6UXQ8 127 aa3.48□□□□□ -1.85
USP33-208ENST00000477949 TMUB2Q71RG4 321 aa3.48□□□□□ -1.85
USP33-208ENST00000477949 MRPL52Q86TS9 123 aaKnown RBP3.48□□□□□ -1.85
USP33-208ENST00000477949 BAGE2Q86Y30 109 aa3.48□□□□□ -1.85
USP33-208ENST00000477949 C9orf62Q8N4C0 152 aa3.48□□□□□ -1.85
USP33-208ENST00000477949 KRTAP2-4Q9BYR9 128 aa3.48□□□□□ -1.85
USP33-208ENST00000477949 GAGE2DQ9UEU5 116 aa3.48□□□□□ -1.85
USP33-208ENST00000477949 APCSP02743 223 aa3.47□□□□□ -1.85
USP33-208ENST00000477949 TRGC1P0CF51 173 aa3.47□□□□□ -1.85
USP33-208ENST00000477949 AKR1C3P42330 323 aa3.47□□□□□ -1.85
USP33-208ENST00000477949 TMEM241Q24JQ0 296 aa3.47□□□□□ -1.85
USP33-208ENST00000477949 TEX261Q6UWH6 196 aa3.47□□□□□ -1.85
USP33-208ENST00000477949 C5orf38Q86SI9 138 aa3.47□□□□□ -1.85
USP33-208ENST00000477949 GATD1Q8NB37 220 aa3.47□□□□□ -1.85
USP33-208ENST00000477949 OR10D4PQ8NGN7 298 aa3.47□□□□□ -1.85
USP33-208ENST00000477949 ENKURQ8TC29 256 aa3.47□□□□□ -1.85
USP33-208ENST00000477949 S100ZQ8WXG8 99 aa3.47□□□□□ -1.85
USP33-208ENST00000477949 NDUFA13Q9P0J0 144 aa3.47□□□□□ -1.85
USP33-208ENST00000477949 IGLV8-61A0A075B6I0 122 aa3.46□□□□□ -1.86
USP33-208ENST00000477949 IGKV2D-26A0A0A0MRZ7 120 aa3.46□□□□□ -1.86
USP33-208ENST00000477949 BORCS7-ASMTA0A0B4J1R7 106 aa3.46□□□□□ -1.86
USP33-208ENST00000477949 C1orf196B1AJZ1 125 aa3.46□□□□□ -1.86
USP33-208ENST00000477949 SSNA1O43805 119 aa3.46□□□□□ -1.86
USP33-208ENST00000477949 PAGE4O60829 102 aa3.46□□□□□ -1.86
USP33-208ENST00000477949 PCOTHQ58A44 107 aa3.46□□□□□ -1.86
USP33-208ENST00000477949 CST9LP1Q5W188 147 aa3.46□□□□□ -1.86
USP33-208ENST00000477949 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
USP33-208ENST00000477949 MBD3L1Q8WWY6 194 aa3.46□□□□□ -1.86
USP33-208ENST00000477949 RPL39LQ96EH5 51 aaKnown RBP3.46□□□□□ -1.86
USP33-208ENST00000477949 SMIM12Q96EX1 92 aa3.46□□□□□ -1.86
USP33-208ENST00000477949 BTF3L4Q96K17 158 aa3.46□□□□□ -1.86
USP33-208ENST00000477949 CNFNQ9BYD5 112 aa3.46□□□□□ -1.86
USP33-208ENST00000477949 C22orf24Q9Y442 160 aa3.46□□□□□ -1.86
USP33-208ENST00000477949 CSDC2Q9Y534 153 aaKnown RBP3.46□□□□□ -1.86
USP33-208ENST00000477949 TRBV6-5A0A0K0K1A5 114 aa3.45□□□□□ -1.86
USP33-208ENST00000477949 XKRY2A2RUG3 117 aa3.45□□□□□ -1.86
USP33-208ENST00000477949 MAP1LC3B2A6NCE7 125 aa3.45□□□□□ -1.86
USP33-208ENST00000477949 NDUFC2-KCTD14E9PQ53 114 aa3.45□□□□□ -1.86
USP33-208ENST00000477949 I3L3M4 83 aa3.45□□□□□ -1.86
USP33-208ENST00000477949 NDUFA1O15239 70 aa3.45□□□□□ -1.86
USP33-208ENST00000477949 UPK1BO75841 260 aa3.45□□□□□ -1.86
USP33-208ENST00000477949 IFITM3Q01628 133 aa3.45□□□□□ -1.86
USP33-208ENST00000477949 KIAA0087Q14695 138 aa3.45□□□□□ -1.86
USP33-208ENST00000477949 AKR1C8PQ5T2L2 129 aa3.45□□□□□ -1.86
USP33-208ENST00000477949 RPL7L1Q6DKI1 246 aaKnown RBP3.45□□□□□ -1.86
USP33-208ENST00000477949 SPAG11AQ6PDA7 123 aa3.45□□□□□ -1.86
USP33-208ENST00000477949 ORAOV1Q8WV07 137 aa3.45□□□□□ -1.86
USP33-208ENST00000477949 TMEM101Q96IK0 257 aa3.45□□□□□ -1.86
USP33-208ENST00000477949 MAP1LC3BQ9GZQ8 125 aa3.45□□□□□ -1.86
USP33-208ENST00000477949 IGHV3OR16-9A0A0B4J2B5 98 aa3.44□□□□□ -1.86
USP33-208ENST00000477949 A0A1B0GVG6 124 aa3.44□□□□□ -1.86
USP33-208ENST00000477949 SDHAF1A6NFY7 115 aa3.44□□□□□ -1.86
USP33-208ENST00000477949 LYZL1Q6UWQ5 148 aa3.44□□□□□ -1.86
USP33-208ENST00000477949 DAND5Q8N907 189 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms