RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 IFITM10A6NMD0 228 aa12.48□□□□□ -0.41
USP11-205ENST00000467378 HAMPP81172 84 aa12.48□□□□□ -0.41
USP11-205ENST00000467378 ZC2HC1BQ5TFG8 222 aa12.48□□□□□ -0.41
USP11-205ENST00000467378 TEX43Q6ZNM6 134 aa12.48□□□□□ -0.41
USP11-205ENST00000467378 LINC00173Q6ZV60 143 aa12.48□□□□□ -0.41
USP11-205ENST00000467378 NTN5Q8WTR8 489 aaPredicted RBP12.48□□□□□ -0.41
USP11-205ENST00000467378 SCGB3A1Q96QR1 104 aa12.48□□□□□ -0.41
USP11-205ENST00000467378 C14orf177Q52M58 125 aa12.47□□□□□ -0.41
USP11-205ENST00000467378 SERTAD4-AS1Q5TG53 156 aa12.47□□□□□ -0.41
USP11-205ENST00000467378 CHCHD1Q96BP2 118 aaKnown RBP12.47□□□□□ -0.41
USP11-205ENST00000467378 VCX2Q9H322 139 aa12.47□□□□□ -0.41
USP11-205ENST00000467378 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.46□□□□□ -0.41
USP11-205ENST00000467378 PRSS1P07477 247 aa12.46□□□□□ -0.41
USP11-205ENST00000467378 Q6ZN92 141 aa12.46□□□□□ -0.41
USP11-205ENST00000467378 C15orf56Q8N910 161 aa12.46□□□□□ -0.41
USP11-205ENST00000467378 IGLV5-52A0A0A0MRZ9 124 aa12.45□□□□□ -0.42
USP11-205ENST00000467378 HBDP02042 147 aa12.45□□□□□ -0.42
USP11-205ENST00000467378 PMCHL1Q16048 86 aa12.45□□□□□ -0.42
USP11-205ENST00000467378 PAPPA-AS1Q5QFB9 102 aa12.45□□□□□ -0.42
USP11-205ENST00000467378 DNAH8Q96JB1 4490 aa12.44□□□□□ -0.42
USP11-205ENST00000467378 UBE2D1P51668 147 aa12.44□□□□□ -0.42
USP11-205ENST00000467378 CFAP161Q6P656 301 aa12.44□□□□□ -0.42
USP11-205ENST00000467378 BAGE3Q86Y29 109 aa12.44□□□□□ -0.42
USP11-205ENST00000467378 GCSHP23434 173 aa12.43□□□□□ -0.42
USP11-205ENST00000467378 PDZD11Q5EBL8 140 aa12.43□□□□□ -0.42
USP11-205ENST00000467378 LINC00242Q5T6M2 205 aa12.43□□□□□ -0.42
USP11-205ENST00000467378 C2orf88Q9BSF0 95 aa12.43□□□□□ -0.42
USP11-205ENST00000467378 IGHV3OR16-9A0A0B4J2B5 98 aa12.42□□□□□ -0.42
USP11-205ENST00000467378 KRTAP29-1A8MX34 341 aaPredicted RBP12.42□□□□□ -0.42
USP11-205ENST00000467378 LINC00310P59036 64 aa12.42□□□□□ -0.42
USP11-205ENST00000467378 FAM19A3Q7Z5A8 133 aa12.42□□□□□ -0.42
USP11-205ENST00000467378 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.41□□□□□ -0.42
USP11-205ENST00000467378 COX7A2LO14548 114 aa12.41□□□□□ -0.42
USP11-205ENST00000467378 COX6A2Q02221 97 aa12.41□□□□□ -0.42
USP11-205ENST00000467378 C5orf38Q86SI9 138 aa12.41□□□□□ -0.42
USP11-205ENST00000467378 IGHV1-58A0A0C4DH39 117 aa12.4□□□□□ -0.42
USP11-205ENST00000467378 hDV102S1A0JD36 115 aa12.4□□□□□ -0.42
USP11-205ENST00000467378 GVQW2A0A096LPI5 108 aaPredicted RBP12.39□□□□□ -0.43
USP11-205ENST00000467378 HIST1H2BKO60814 126 aa12.39□□□□□ -0.43
USP11-205ENST00000467378 HSBP1O75506 76 aa12.39□□□□□ -0.43
USP11-205ENST00000467378 SERF1AO75920 110 aa12.39□□□□□ -0.43
USP11-205ENST00000467378 SLPIP03973 132 aa12.39□□□□□ -0.43
USP11-205ENST00000467378 HIST1H2BJP06899 126 aa12.39□□□□□ -0.43
USP11-205ENST00000467378 HIST1H2BOP23527 126 aa12.39□□□□□ -0.43
USP11-205ENST00000467378 HIST1H2BBP33778 126 aa12.39□□□□□ -0.43
USP11-205ENST00000467378 HIST1H2BDP58876 126 aa12.39□□□□□ -0.43
USP11-205ENST00000467378 HIST1H2BCP62807 126 aa12.39□□□□□ -0.43
USP11-205ENST00000467378 HIST2H2BEQ16778 126 aa12.39□□□□□ -0.43
USP11-205ENST00000467378 HIGD2BQ4VC39 106 aa12.39□□□□□ -0.43
USP11-205ENST00000467378 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.39□□□□□ -0.43
USP11-205ENST00000467378 HIST1H2BHQ93079 126 aa12.39□□□□□ -0.43
USP11-205ENST00000467378 HIST1H2BNQ99877 126 aa12.39□□□□□ -0.43
USP11-205ENST00000467378 HIST1H2BMQ99879 126 aa12.39□□□□□ -0.43
USP11-205ENST00000467378 NUPR1O60356 82 aa12.38□□□□□ -0.43
USP11-205ENST00000467378 PMVKQ15126 192 aa12.38□□□□□ -0.43
USP11-205ENST00000467378 CST9LQ9H4G1 147 aa12.38□□□□□ -0.43
USP11-205ENST00000467378 PLA2G2DQ9UNK4 145 aa12.38□□□□□ -0.43
USP11-205ENST00000467378 MALP21145 153 aa12.37□□□□□ -0.43
USP11-205ENST00000467378 CNBPP62633 177 aaKnown RBP12.37□□□□□ -0.43
USP11-205ENST00000467378 FAM19A2Q8N3H0 131 aa12.37□□□□□ -0.43
USP11-205ENST00000467378 HMCN2Q8NDA2 5059 aa12.37□□□□□ -0.43
USP11-205ENST00000467378 A0A087WZ39 114 aa12.36□□□□□ -0.43
USP11-205ENST00000467378 A0A0J9YXV3 536 aa12.36□□□□□ -0.43
USP11-205ENST00000467378 ATP5LO75964 103 aa12.36□□□□□ -0.43
USP11-205ENST00000467378 LINC01620Q4KN68 170 aa12.35□□□□□ -0.43
USP11-205ENST00000467378 C9orf163Q8N9P6 203 aa12.35□□□□□ -0.43
USP11-205ENST00000467378 APOMO95445 188 aa12.34□□□□□ -0.43
USP11-205ENST00000467378 HERVK_113P63121 156 aa12.34□□□□□ -0.43
USP11-205ENST00000467378 SEC11AP67812 179 aa12.34□□□□□ -0.43
USP11-205ENST00000467378 LINC00526Q96FQ7 95 aa12.34□□□□□ -0.43
USP11-205ENST00000467378 IGHV3-64A0A075B6Q5 118 aa12.33□□□□□ -0.44
USP11-205ENST00000467378 TINCRA0A1B0GVN0 87 aa12.33□□□□□ -0.44
USP11-205ENST00000467378 PLA2G1BP04054 148 aaKnown RBP12.33□□□□□ -0.44
USP11-205ENST00000467378 LINC01561Q8N1V8 128 aa12.33□□□□□ -0.44
USP11-205ENST00000467378 ZNF561-AS1K7EIQ3 104 aa12.32□□□□□ -0.44
USP11-205ENST00000467378 OR10D4PQ8NGN7 298 aa12.32□□□□□ -0.44
USP11-205ENST00000467378 CDKN2A-AS1Q9UH64 79 aa12.32□□□□□ -0.44
USP11-205ENST00000467378 IGLV4-69A0A075B6H9 119 aa12.31□□□□□ -0.44
USP11-205ENST00000467378 NDUFA6P56556 154 aa12.31□□□□□ -0.44
USP11-205ENST00000467378 IFI27L1Q96BM0 104 aa12.31□□□□□ -0.44
USP11-205ENST00000467378 GEMIN7Q9H840 131 aaKnown RBP12.31□□□□□ -0.44
USP11-205ENST00000467378 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.3□□□□□ -0.44
USP11-205ENST00000467378 ORAOV1Q8WV07 137 aa12.3□□□□□ -0.44
USP11-205ENST00000467378 IGLV5-45A0A087WSX0 123 aa12.29□□□□□ -0.44
USP11-205ENST00000467378 LEPROTL1O95214 131 aa12.29□□□□□ -0.44
USP11-205ENST00000467378 IGLC3P0DOY3 106 aa12.29□□□□□ -0.44
USP11-205ENST00000467378 FAM30AQ9NZY2 134 aa12.29□□□□□ -0.44
USP11-205ENST00000467378 SPAG11BQ08648 103 aa12.28□□□□□ -0.44
USP11-205ENST00000467378 KIAA0087Q14695 138 aa12.28□□□□□ -0.44
USP11-205ENST00000467378 C2orf48Q96LS8 159 aa12.28□□□□□ -0.44
USP11-205ENST00000467378 TRAV12-1A0A0B4J245 112 aa12.27□□□□□ -0.45
USP11-205ENST00000467378 COA6Q5JTJ3 125 aaKnown RBP12.27□□□□□ -0.45
USP11-205ENST00000467378 SDIM1Q6ZPB5 146 aa12.27□□□□□ -0.45
USP11-205ENST00000467378 SYCNQ0VAF6 134 aa12.26□□□□□ -0.45
USP11-205ENST00000467378 Q6ZSA8 131 aa12.26□□□□□ -0.45
USP11-205ENST00000467378 LINC00469Q8N7U9 141 aa12.26□□□□□ -0.45
USP11-205ENST00000467378 FABP4P15090 132 aa12.25□□□□□ -0.45
USP11-205ENST00000467378 Q6ZRU5 148 aa12.25□□□□□ -0.45
USP11-205ENST00000467378 LINC00528Q8N1L1 170 aa12.25□□□□□ -0.45
USP11-205ENST00000467378 CARD19Q96LW7 228 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms